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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AQP1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
41.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3131.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1578.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
1113.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
757.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
621.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
328.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
176.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
167.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
138.5
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
125.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
123.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
109.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
102.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
98.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
94.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
92.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
92.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
90.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
86.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
82.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
78.5
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
76.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
73.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
68.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
60.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
60.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
57.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
55.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
54.7
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
52.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
52.0
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
51.6
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
50.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
50.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
49.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
49.7
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
48.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
48.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
45.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
45.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
44.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
44.2
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
43.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
43.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
43.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
41.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
41.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
39.7
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
39.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
39.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
39.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
38.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
36.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
35.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
35.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
35.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
34.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
33.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
33.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
32.7
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
32.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
32.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
32.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
32.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
31.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
30.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
30.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
30.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
30.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
30.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
30.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
30.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
30.0
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
30.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
29.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
29.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
29.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
28.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
28.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
28.0
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
27.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
27.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
27.2
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
27.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
27.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
26.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
25.9
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
25.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
25.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
25.6
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
25.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
25.5
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
25.4
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
25.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
25.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
25.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
25.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
24.9
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
24.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
24.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
24.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
23.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
23.4
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
23.4
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
23.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
22.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
22.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
22.2
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
22.1
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
22.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
21.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
21.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
21.5
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
21.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
21.4
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
21.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
21.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
21.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
20.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
20.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
20.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
20.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
19.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
19.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
19.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
19.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
19.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
19.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
18.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
18.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
18.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
18.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
18.3
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
18.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
17.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
17.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
17.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
17.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
17.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
17.4
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
17.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
17.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
16.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
16.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
16.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
16.7
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
16.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
16.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
16.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
16.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
16.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
16.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
16.2
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
16.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
16.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
16.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
15.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
15.9
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
15.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
15.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
15.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
15.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
15.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
15.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
15.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
15.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
15.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
15.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
14.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
14.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
14.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
14.5
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
14.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
14.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
14.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
14.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
14.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
14.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
14.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
13.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
13.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
13.8
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
13.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.8
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
13.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
13.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
13.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
13.3
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
13.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
13.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
13.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
13.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
13.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
13.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
13.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
12.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
12.7
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
12.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
12.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
12.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
12.4
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
12.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
12.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
12.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
12.2
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
12.2
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
12.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
12.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
12.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
12.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.9
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
11.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
11.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
11.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
11.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
11.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
11.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
11.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
11.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
11.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
10.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
10.8
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
10.6
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
10.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
10.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
10.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
10.1
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
10.0
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
9.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
9.7
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
9.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
9.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.3
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
9.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
9.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
9.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
9.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
9.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
8.8
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
8.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
8.6
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
8.3
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
8.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
8.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
7.9
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
7.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
7.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
7.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
7.6
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
7.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
7.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
7.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
7.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.2
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
7.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
6.9
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
6.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.7
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
6.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
6.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
6.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
6.4
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
6.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
6.1
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
6.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
5.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
5.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
5.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
5.9
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
5.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.8
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
5.6
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
5.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
5.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
5.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
5.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
5.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
5.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
5.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
5.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
4.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
4.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
4.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
4.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.6
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
4.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
4.6
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
4.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
4.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
4.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
4.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.1
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
4.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
3.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
3.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
3.6
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
3.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
3.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
3.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
3.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
3.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
3.1
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
2.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.7
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
2.5
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
2.5
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
2.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
2.3
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
2.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
2.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
2.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
1.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
1.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1.4
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
1.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
1.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
1.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
0.9
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
0.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AQP1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
47.9
Number of samples
231
Samples
Sample
Description
TPM
DO45303
0 years, female, NA, stage:3, alive, 990 days
1949.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
1060.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
769.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
694.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
353.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
305.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
281.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
237.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
181.8
DO45307
0 years, female, NA, stage:4, dead, 240 days
175.6
DO45251
0 years, female, NA, stage:2, alive, 900 days
158.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
145.0
DO23523
0 years, male, NA, stage:3, alive, 1080 days
129.3
DO23530
0 years, male, NA, stage:4, dead, 180 days
124.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
105.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
100.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
89.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
81.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
77.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
72.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
65.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
63.4
DO45181
0 years, female, NA, stage:2, alive, 1200 days
61.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
61.4
DO45273
0 years, male, NA, stage:2, alive, 480 days
60.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
59.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
58.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
55.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
53.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
52.4
DO50809
0 years, male, NA, stage:3, dead, 720 days
48.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
48.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
47.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
46.6
DO48759
0 years, male, NA, stage:3, alive, 720 days
46.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
42.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
42.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
41.4
DO50776
0 years, male, NA, stage:1, alive, 690 days
40.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
40.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
39.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
38.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
38.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
38.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
38.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
37.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
37.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
36.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
36.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
36.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
34.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
34.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
33.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
33.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
32.4
DO45281
0 years, male, NA, stage:4, alive, 750 days
32.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
32.2
DO45121
0 years, male, NA, stage:3, alive, 1530 days
32.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
31.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
31.8
DO48712
0 years, male, NA, stage:2, alive, 810 days
31.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
31.5
DO45143
0 years, male, NA, stage:3, alive, 1290 days
30.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
30.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
30.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
29.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
29.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
28.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
28.7
DO45187
0 years, female, NA, stage:1, alive, 1260 days
28.7
DO48672
0 years, male, NA, stage:2, alive, 450 days
28.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
28.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
28.2
DO45253
0 years, male, NA, stage:2, alive, 870 days
28.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
27.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
27.0
DO50857
0 years, male, NA, stage:2, alive, 210 days
26.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
26.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
25.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
25.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
25.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
25.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
25.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
24.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
24.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
24.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
24.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
23.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
23.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
23.4
DO50778
0 years, male, NA, stage:4, alive, 630 days
23.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
22.9
DO45229
0 years, male, NA, stage:1, alive, 990 days
22.8
DO48757
0 years, female, NA, stage:3, alive, 480 days
22.5
DO23545
0 years, male, NA, stage:2, dead, 570 days
22.5
DO23536
0 years, male, NA, stage:2, alive, 930 days
22.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
22.2
DO23531
0 years, female, NA, stage:3, alive, 900 days
22.0
DO48719
0 years, male, NA, stage:2, alive, 690 days
22.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
21.9
DO45301
0 years, male, NA, stage:2, dead, 1440 days
21.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
21.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
21.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
21.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
20.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
19.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
19.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
19.0
DO48704
0 years, female, NA, stage:3, alive, 750 days
18.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
18.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
17.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
17.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
17.4
DO23527
0 years, male, NA, stage:1, alive, 1050 days
16.9
DO48761
0 years, male, NA, stage:2, alive, 870 days
16.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
16.2
DO48730
0 years, female, NA, stage:2, alive, 630 days
16.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
15.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
15.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
15.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
15.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
15.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
15.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
14.9
DO50804
0 years, male, NA, stage:2, alive, 720 days
14.6
DO45235
0 years, female, NA, stage:1, alive, 900 days
14.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
14.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
13.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
13.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
13.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
13.0
DO50829
0 years, male, NA, stage:3, alive, 570 days
12.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
12.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
12.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
12.3
DO45094
0 years, male, NA, stage:3, alive, 1650 days
12.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
12.1
DO48746
0 years, male, NA, stage:3, alive, 570 days
12.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
11.8
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.7
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.6
DO48742
0 years, male, NA, stage:2, alive, 600 days
11.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
11.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
11.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
11.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
11.3
DO45193
0 years, female, NA, stage:4, dead, 120 days
11.1
DO45179
0 years, female, NA, stage:2, alive, 600 days
10.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
10.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
10.4
DO23519
0 years, male, NA, stage:3, alive, 630 days
10.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
10.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
10.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
10.2
DO45119
0 years, male, NA, stage:3, dead, 510 days
10.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
10.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
10.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
9.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
9.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
9.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
9.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
9.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
8.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
8.3
DO50814
0 years, male, NA, stage:3, alive, 420 days
8.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
8.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
8.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
7.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
7.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
7.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
7.3
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.0
DO50799
0 years, female, NA, stage:2, alive, 540 days
7.0
DO45199
0 years, female, NA, stage:2, alive, 1350 days
6.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
6.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
6.6
DO50839
0 years, female, NA, stage:3, alive, 330 days
6.5
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
6.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
6.3
DO50793
0 years, male, NA, stage:4, alive, 540 days
6.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
6.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
5.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
5.8
DO50844
0 years, male, NA, stage:4, alive, 300 days
5.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
5.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
5.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.4
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
5.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
5.0
DO23540
0 years, male, NA, stage:1, alive, 750 days
4.9
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.9
DO23521
0 years, male, NA, stage:3, alive, 1110 days
4.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
4.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
4.4
DO45217
0 years, female, NA, stage:3, dead, 270 days
4.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
4.0
DO45145
0 years, male, NA, stage:3, dead, 60 days
3.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
3.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
3.5
DO23513
0 years, male, NA, stage:3, alive, 1200 days
3.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
3.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
3.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
3.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
3.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
3.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
2.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
2.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
2.7
DO45131
0 years, male, NA, stage:4, dead, 360 days
2.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
2.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
2.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
2.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
1.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
1.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
1.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
1.6
DO45149
0 years, female, NA, stage:2, alive, 1260 days
1.4
DO50785
0 years, male, NA, stage:4, dead, 90 days
1.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
1.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
1.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
0.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
328
Normal
1.0
574
Normal
0.9
192
Normal
0.9
874
Normal
0.9
916
Normal
0.8
536
Normal
0.8
545
Tumor
0.8
924
Normal
0.8
877
Tumor
0.7
111
Normal
0.7
416
Normal
0.7
386
Normal
0.7
113
Tumor
0.7
188
Normal
0.6
744
Normal
0.6
436
Normal
0.6
546
Normal
0.6
1042
Normal
0.6
498
Normal
0.6
126
Normal
0.6
461
Tumor
0.6
268
Normal
0.6
421
Tumor
0.6
478
Normal
0.6
227
Tumor
0.5
383
Tumor
0.5
311
Tumor
0.5
816
Normal
0.5
141
Tumor
0.5
223
Tumor
0.5
128
Normal
0.5
364
Normal
0.5
384
Normal
0.5
727
Tumor
0.5
363
Tumor
0.5
1046
Normal
0.5
187
Tumor
0.5
538
Normal
0.4
146
Normal
0.4
918
Normal
0.4
212
Normal
0.4
448
Normal
0.4
627
Tumor
0.4
415
Tumor
0.4
713
Tumor
0.4
628
Normal
0.4
863
Tumor
0.4
447
Tumor
0.4
185
Tumor
0.4
492
Normal
0.4
277
Tumor
0.4
914
Normal
0.4
112
Tumor
0.4
424
Normal
0.4
741
Tumor
0.4
1044
Normal
0.4
426
Normal
0.4
434
Normal
0.4
474
Normal
0.4
228
Normal
0.4
642
Normal
0.4
124
Normal
0.4
728
Normal
0.3
284
Normal
0.3
224
Normal
0.3
362
Normal
0.3
366
Normal
0.3
444
Normal
0.3
743
Tumor
0.3
137
Tumor
0.3
968
Normal
0.3
572
Normal
0.3
214
Normal
0.3
558
Normal
0.3
466
Normal
0.3
982
Normal
0.2
756
Normal
0.2
1045
Tumor
0.2
1032
Normal
0.2
917
Tumor
0.2
913
Tumor
0.2
388
Normal
0.2
272
Normal
0.2
138
Normal
0.2
132
Normal
0.2
943
Tumor
0.2
722
Normal
0.2
815
Tumor
0.2
464
Normal
0.2
984
Normal
0.2
213
Tumor
0.2
392
Normal
0.2
456
Normal
0.2
344
Normal
0.2
455
Tumor
0.2
312
Normal
0.2
467
Tumor
0.2
528
Normal
0.2
332
Normal
0.2
262
Normal
0.2
958
Normal
0.2
452
Normal
0.2
352
Normal
0.2
884
Normal
0.2
278
Normal
0.2
698
Normal
0.1
571
Tumor
0.1
114
Normal
0.1
956
Normal
0.1
494
Normal
0.1
171
Tumor
0.1
412
Normal
0.1
786
Normal
0.1
217
Tumor
0.1
742
Normal
0.1
186
Normal
0.1
297
Tumor
0.1
814
Normal
0.1
852
Normal
0.1
145
Tumor
0.1
557
Tumor
0.1
911
Tumor
0.1
881
Tumor
0.1
468
Normal
0.1
534
Normal
0.1
954
Normal
0.1
944
Normal
0.1
462
Normal
0.1
222
Normal
0.1
697
Tumor
0.0
978
Normal
0.0
615
Tumor
0.0
368
Normal
0.0
1022
Normal
0.0
422
Normal
0.0
617
Tumor
0.0
411
Tumor
0.0
823
Tumor
0.0
354
Normal
0.0
864
Normal
0.0
353
Tumor
0.0
446
Normal
0.0
351
Tumor
0.0
618
Normal
0.0
662
Normal
0.0
211
Tumor
0.0
298
Normal
0.0
391
Tumor
0.0
912
Normal
0.0
923
Tumor
0.0
862
Normal
0.0
232
Normal
0.0
746
Normal
0.0
818
Normal
0.0
161
Tumor
0.0
866
Normal
0.0
483
Tumor
0.0
976
Normal
0.0
738
Normal
-0.1
136
Normal
-0.1
926
Normal
-0.1
283
Tumor
-0.1
915
Tumor
-0.1
491
Tumor
-0.1
218
Normal
-0.1
563
Tumor
-0.1
554
Normal
-0.1
142
Normal
-0.1
868
Normal
-0.1
172
Normal
-0.1
922
Normal
-0.1
331
Tumor
-0.1
882
Normal
-0.1
358
Normal
-0.1
724
Normal
-0.1
975
Tumor
-0.1
723
Tumor
-0.1
196
Normal
-0.1
564
Normal
-0.1
1028
Normal
-0.1
191
Tumor
-0.1
1043
Tumor
-0.1
423
Tumor
-0.1
355
Tumor
-0.1
671
Tumor
-0.1
488
Normal
-0.1
817
Tumor
-0.1
314
Normal
-0.2
553
Tumor
-0.2
231
Tumor
-0.2
414
Normal
-0.2
432
Normal
-0.2
686
Normal
-0.2
376
Normal
-0.2
465
Tumor
-0.2
258
Normal
-0.2
261
Tumor
-0.2
162
Normal
-0.2
123
Tumor
-0.2
451
Tumor
-0.2
148
Normal
-0.2
356
Normal
-0.2
867
Tumor
-0.2
721
Tumor
-0.2
517
Tumor
-0.2
195
Tumor
-0.2
696
Normal
-0.2
616
Normal
-0.2
873
Tumor
-0.2
665
Tumor
-0.2
365
Tumor
-0.2
427
Tumor
-0.3
313
Tumor
-0.3
361
Tumor
-0.3
484
Normal
-0.3
1041
Tumor
-0.3
394
Normal
-0.3
1026
Normal
-0.3
938
Normal
-0.3
135
Tumor
-0.3
963
Tumor
-0.3
396
Normal
-0.3
341
Tumor
-0.3
647
Tumor
-0.3
1014
Normal
-0.3
925
Tumor
-0.3
428
Normal
-0.3
981
Tumor
-0.3
286
Normal
-0.3
636
Normal
-0.3
716
Normal
-0.3
493
Tumor
-0.3
666
Normal
-0.3
857
Tumor
-0.3
964
Normal
-0.3
878
Normal
-0.3
883
Tumor
-0.3
463
Tumor
-0.3
433
Tumor
-0.4
778
Normal
-0.4
573
Tumor
-0.4
327
Tumor
-0.4
568
Normal
-0.4
267
Tumor
-0.4
861
Tumor
-0.4
737
Tumor
-0.4
745
Tumor
-0.4
342
Normal
-0.4
514
Normal
-0.4
271
Tumor
-0.4
664
Normal
-0.4
813
Tumor
-0.4
1025
Tumor
-0.4
648
Normal
-0.4
966
Normal
-0.4
1016
Normal
-0.4
967
Tumor
-0.5
472
Normal
-0.5
714
Normal
-0.5
755
Tumor
-0.5
1015
Tumor
-0.5
824
Normal
-0.5
127
Tumor
-0.5
425
Tumor
-0.5
147
Tumor
-0.5
641
Tumor
-0.5
777
Tumor
-0.5
965
Tumor
-0.5
715
Tumor
-0.5
785
Tumor
-0.5
921
Tumor
-0.5
952
Normal
-0.5
977
Tumor
-0.5
435
Tumor
-0.6
477
Tumor
-0.6
535
Tumor
-0.6
672
Normal
-0.6
527
Tumor
-0.6
413
Tumor
-0.6
487
Tumor
-0.6
533
Tumor
-0.6
431
Tumor
-0.6
395
Tumor
-0.6
443
Tumor
-0.6
635
Tumor
-0.6
257
Tumor
-0.6
387
Tumor
-0.6
343
Tumor
-0.7
953
Tumor
-0.7
858
Normal
-0.7
537
Tumor
-0.7
663
Tumor
-0.7
957
Tumor
-0.7
375
Tumor
-0.7
1013
Tumor
-0.7
221
Tumor
-0.7
851
Tumor
-0.8
367
Tumor
-0.8
983
Tumor
-0.8
1031
Tumor
-0.8
482
Normal
-0.8
497
Tumor
-0.9
131
Tumor
-0.9
515
Tumor
-0.9
1027
Tumor
-0.9
285
Tumor
-0.9
125
Tumor
-0.9
481
Tumor
-0.9
524
Normal
-1.0
526
Normal
-1.0
357
Tumor
-1.0
516
Normal
-1.0
518
Normal
-1.0
695
Tumor
-1.0
385
Tumor
-1.1
1021
Tumor
-1.1
513
Tumor
-1.1
471
Tumor
-1.1
567
Tumor
-1.1
865
Tumor
-1.1
937
Tumor
-1.2
445
Tumor
-1.2
473
Tumor
-1.3
685
Tumor
-1.3
525
Tumor
-1.3
393
Tumor
-1.4
661
Tumor
-1.4
955
Tumor
-1.6
951
Tumor
-1.8
523
Tumor
-1.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.