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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZBED5 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.8
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
35.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
35.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
34.2
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.6
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
31.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
31.7
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
29.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
28.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
28.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
27.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
26.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
26.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
25.4
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
24.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
22.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
22.3
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
22.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
22.0
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
21.8
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
20.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
20.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
20.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
20.1
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
20.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
18.8
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
18.6
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
18.6
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
18.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
17.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
17.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
17.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
17.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
17.1
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
16.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
16.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
15.7
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
15.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.1
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
14.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
13.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
13.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
13.1
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
12.7
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
12.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
11.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
11.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
10.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
10.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
9.9
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
9.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
9.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
8.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
7.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.7
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
7.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
6.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZBED5 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
53.9
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
47.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
42.0
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
40.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
40.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
39.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
37.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
37.1
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
36.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
36.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
36.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
36.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
36.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
36.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
36.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
36.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
36.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
35.7
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
35.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
35.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
35.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
34.9
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
34.5
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
34.3
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
34.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
34.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
33.9
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
33.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
33.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
33.5
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
33.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
33.2
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
32.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
32.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
32.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
32.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
32.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
32.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
32.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
32.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
31.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
31.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
31.8
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
31.7
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
31.6
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
31.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
31.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
31.2
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
31.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
31.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
30.8
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
30.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
30.7
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
30.7
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
30.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
30.5
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
30.5
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
30.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
30.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
30.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
30.3
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
30.3
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
30.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
30.1
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
30.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
30.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
29.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
29.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
29.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
29.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
29.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
29.6
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
29.5
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
29.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
29.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
29.2
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
29.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
29.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
29.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
29.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
28.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
28.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
28.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
28.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
28.7
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
28.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
28.6
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
28.5
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
28.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
28.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
27.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
27.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
27.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
27.8
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
27.7
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
27.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
27.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
27.5
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
27.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
27.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
27.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
27.2
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
27.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
27.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
27.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
27.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
27.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
26.9
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
26.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
26.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
26.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
26.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
26.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
26.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
26.4
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
26.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
26.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
26.4
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
26.3
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
26.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
26.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
26.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
26.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
25.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
25.9
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
25.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
25.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
25.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
25.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
25.5
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
25.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
25.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
25.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
25.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
25.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
25.4
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
25.4
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
25.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
25.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
25.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
25.0
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
24.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
24.8
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
24.7
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
24.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
24.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
24.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
24.6
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
24.5
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
24.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
24.4
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
24.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
24.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
24.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
24.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
24.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
24.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
24.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
24.0
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
23.9
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
23.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
23.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
23.6
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
23.5
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
23.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
23.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
23.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
23.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
23.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
23.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
23.2
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
23.2
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
23.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
23.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
23.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
22.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
22.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
22.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
22.8
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
22.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
22.7
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
22.7
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
22.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
22.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
22.6
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
22.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
22.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
22.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
22.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
22.3
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
22.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
22.3
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
22.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
22.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
22.2
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
22.1
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
22.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
22.0
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
22.0
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
21.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
21.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
21.8
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
21.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
21.7
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
21.7
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
21.6
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
21.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.5
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
21.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
21.4
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
21.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
21.4
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
21.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.4
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
21.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
21.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
21.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.2
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
21.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
21.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
21.1
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
21.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
21.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
21.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
21.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
21.0
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
20.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
20.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
20.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
20.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
20.7
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
20.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.6
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.6
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.6
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
20.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
20.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
20.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
20.3
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
20.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
20.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
20.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
20.2
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
20.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
20.1
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
20.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
20.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
20.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
20.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
20.1
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
20.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
20.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
19.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
19.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
19.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.8
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
19.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.7
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
19.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
19.6
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
19.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
19.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
19.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
19.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
19.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
19.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
19.1
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
19.0
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.0
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
19.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
19.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
19.0
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
18.9
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
18.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
18.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.7
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
18.7
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
18.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
18.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
18.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
18.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
18.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
18.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
18.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
18.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
18.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
18.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
18.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
18.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
18.2
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
18.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
18.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
18.0
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
18.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
18.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
18.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
17.9
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
17.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
17.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
17.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
17.8
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
17.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
17.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
17.7
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
17.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
17.6
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
17.5
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.5
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
17.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
17.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.4
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
17.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.4
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
17.3
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
17.2
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
17.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
17.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.1
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
17.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
17.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
17.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
17.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
17.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
17.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
17.0
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
16.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
16.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
16.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
16.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
16.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
16.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
16.8
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
16.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
16.7
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
16.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
16.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
16.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
16.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
16.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
16.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
16.3
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
16.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
16.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
16.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
15.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
15.9
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
15.9
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
15.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.7
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
15.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
15.5
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
15.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
15.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
15.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
15.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
15.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
15.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
15.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
15.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
15.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
15.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
15.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
14.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
14.8
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
14.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
14.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
14.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
14.5
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
14.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
14.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
14.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
14.3
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.3
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
14.3
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
14.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
14.2
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
14.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
14.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
14.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
14.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
13.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
13.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.6
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
13.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
13.5
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
13.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
13.4
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
13.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
13.1
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
13.1
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.1
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
13.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
13.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
13.0
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
13.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
12.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
12.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
12.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
12.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
12.2
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
12.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
12.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.0
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
11.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
11.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
11.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
11.5
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.3
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
11.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
11.2
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
11.0
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
10.9
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
10.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
10.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
10.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
10.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
10.4
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
10.2
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
9.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.7
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.7
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
9.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
9.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
9.5
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
9.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
9.3
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
9.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
9.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
9.0
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
8.4
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
8.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.2
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.1
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
7.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
7.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.4
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.2
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
5.4
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
5.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
5.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
5.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZBED5 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
57.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
55.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
55.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
49.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
46.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
46.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
46.2
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
45.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
43.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
43.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
42.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
42.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
42.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
42.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
42.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
41.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
41.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
41.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
40.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
40.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
40.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
40.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
40.0
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
39.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
39.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
39.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
39.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
38.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
38.1
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
38.1
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
37.2
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
36.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
36.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
36.5
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
36.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
35.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
35.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
35.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
35.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
35.1
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
34.8
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
34.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
34.4
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
33.9
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
33.8
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
33.8
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
33.7
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
32.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
32.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
32.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
32.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
31.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
31.1
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
31.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
30.9
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.6
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
29.9
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
29.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
29.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
29.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
29.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
29.0
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
28.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
28.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
28.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
28.4
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
28.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
28.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
27.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
27.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
27.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
27.0
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
26.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
25.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
24.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
24.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
23.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
23.6
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
22.4
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.6
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
21.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
20.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
19.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
19.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
18.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
17.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.5
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
17.3
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.7
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
16.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
15.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.7
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
14.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
ZBED5 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.6
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
57.8
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
46.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
44.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
42.6
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
41.3
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
40.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
39.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
38.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
37.8
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
37.2
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
37.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
35.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
35.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
35.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
34.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
34.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
34.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
33.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
33.3
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
32.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
32.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
31.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
31.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
30.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
29.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
29.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
29.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
29.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
29.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
28.7
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
28.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
28.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
28.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
28.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
28.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
28.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
28.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
27.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
27.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
27.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
27.7
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
27.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
27.3
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
27.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
26.8
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
26.8
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
26.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
26.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
26.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
26.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
25.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
25.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
25.5
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
25.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
24.9
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
24.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
24.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
24.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
24.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.0
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
24.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
23.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
23.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
23.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
23.1
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
22.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
22.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
22.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
22.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
22.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
22.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
22.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
22.3
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
22.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
21.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
21.7
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
21.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
21.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
21.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
21.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
21.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
21.4
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
21.1
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
21.0
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
21.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.9
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
20.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
20.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
20.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
20.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
20.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
20.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
20.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
20.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
20.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
20.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
20.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
20.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
19.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
19.5
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.4
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
19.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
19.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
19.1
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
19.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
19.0
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
19.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
18.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
18.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
18.8
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
18.6
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
18.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
18.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
18.4
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
18.4
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
18.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
18.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
17.8
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
17.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
17.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
17.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
17.3
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
17.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
17.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.9
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
16.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
16.9
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
16.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
16.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
16.6
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
16.5
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
16.3
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
16.2
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
16.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
16.1
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
16.1
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
16.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
15.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.9
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
15.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.8
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
15.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
15.5
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
15.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
15.2
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
15.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
15.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
15.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
14.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
14.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
14.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
14.8
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
14.7
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
14.7
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
14.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
14.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
14.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
14.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
14.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
14.3
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
14.2
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
14.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
14.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
14.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
14.1
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
14.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.0
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.8
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
13.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
13.6
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
13.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.2
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
13.2
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
13.2
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
13.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.9
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
12.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
12.8
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
12.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
12.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
12.7
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.6
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
12.4
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
12.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
12.3
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
12.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
12.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
12.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
11.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.7
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
11.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
11.5
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
11.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
11.2
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
11.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
10.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
10.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
10.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
10.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
10.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
10.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
10.2
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
10.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
10.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
9.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
9.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
9.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
9.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
9.4
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.3
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
9.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
9.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
9.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
8.9
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
8.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
8.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
8.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
8.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
8.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
8.3
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
8.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
8.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
8.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
8.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
7.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
7.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
7.6
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
7.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
7.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
7.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
7.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
6.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
6.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
6.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
6.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
6.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
5.9
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
5.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
5.5
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
5.3
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
5.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
5.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
4.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
4.3
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
4.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
3.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
1.8
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
