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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYRM9 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
33.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
32.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
30.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
30.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
22.9
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
17.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
16.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
15.9
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
15.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
14.1
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
13.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.1
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
11.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
11.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
11.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
10.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
9.8
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.3
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
8.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.7
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
8.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
7.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
7.9
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
7.6
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
7.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
7.4
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.4
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
7.0
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
6.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
6.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
6.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
6.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
6.4
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
6.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
6.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.2
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
6.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
5.8
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
5.8
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
5.5
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
5.3
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
5.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
4.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
4.5
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
4.4
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
4.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
3.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
3.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
3.6
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
3.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
2.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
2.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYRM9 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
52.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
43.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
42.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
40.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
38.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
38.1
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
35.5
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
35.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
35.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
34.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
34.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
34.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
34.4
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
34.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
33.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
33.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
33.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
32.6
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
32.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
31.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
31.3
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
30.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
30.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
30.5
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
30.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
30.2
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
30.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
29.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
29.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
29.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
29.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
28.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
28.4
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
28.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
27.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
27.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
27.7
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
27.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
27.2
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
26.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
26.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
26.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
26.3
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
26.1
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
25.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
25.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
25.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
25.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
25.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
25.4
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
25.3
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
25.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
25.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
25.0
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
24.8
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
24.8
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
24.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
24.6
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
24.4
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
24.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
24.4
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
24.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
24.2
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
24.0
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
24.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
23.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
23.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
23.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
23.7
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
23.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
23.6
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
23.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
23.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
23.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
23.5
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
23.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
23.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
23.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
23.3
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
23.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
23.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
23.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
23.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
23.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
23.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
23.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
22.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
22.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
22.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
22.7
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
22.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
22.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
22.6
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
22.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
22.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
22.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
22.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
22.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.1
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
22.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
21.9
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.9
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
21.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
21.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
21.7
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
21.7
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.6
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
21.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
21.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.4
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
21.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
21.1
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
21.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
21.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
21.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
21.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
21.0
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
20.9
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
20.8
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
20.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
20.6
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
20.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
20.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
20.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
20.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
20.4
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
20.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
20.3
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
20.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
20.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
20.3
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
20.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
20.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
20.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
20.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
20.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
19.9
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
19.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
19.9
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
19.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
19.9
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
19.8
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
19.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
19.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
19.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
19.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
19.3
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
19.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
19.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
19.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
19.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
19.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
19.1
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
19.0
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.0
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
18.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
18.8
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
18.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
18.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
18.7
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
18.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
18.7
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
18.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
18.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
18.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
18.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
18.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
18.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.4
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
18.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
18.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
18.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
18.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
18.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
18.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
18.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
18.1
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
18.1
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
18.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
18.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
18.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
17.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
17.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
17.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
17.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
17.6
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
17.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
17.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
17.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.5
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
17.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
17.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
17.4
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
17.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
17.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
17.2
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
17.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
17.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
17.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
17.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
17.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
17.0
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
17.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
16.9
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
16.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.8
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
16.8
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
16.8
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
16.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
16.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
16.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
16.7
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
16.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
16.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
16.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
16.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
16.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
16.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
16.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
16.5
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
16.5
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
16.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
16.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
16.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
16.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
16.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
16.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
16.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
16.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
16.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
16.1
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
15.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
15.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
15.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
15.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
15.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.5
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
15.4
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
15.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
15.4
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
15.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
15.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
15.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
15.3
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
15.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.2
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
15.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
15.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
15.1
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
15.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
15.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
15.0
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.0
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
15.0
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
14.9
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
14.9
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
14.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
14.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
14.8
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
14.8
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
14.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
14.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
14.7
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
14.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
14.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
14.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
14.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
14.5
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
14.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
14.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
14.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.3
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
14.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
14.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
14.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
14.2
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
14.2
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.1
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
14.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
14.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
14.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
14.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
14.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
14.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.9
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
13.9
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
13.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
13.8
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
13.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
13.6
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
13.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
13.5
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
13.5
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
13.4
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.4
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
13.3
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
13.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
13.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
13.1
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
12.9
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
12.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
12.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.8
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
12.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.7
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
12.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
12.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
12.6
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
12.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
12.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
12.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
12.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
12.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
12.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
12.4
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
12.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
12.3
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
12.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
12.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
12.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
12.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
12.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
12.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
12.0
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.9
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.8
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
11.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
11.8
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
11.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
11.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
11.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
11.6
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
11.6
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
11.6
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
11.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
11.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
11.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
11.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
11.4
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
11.4
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
11.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
11.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
11.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.3
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
11.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
11.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.2
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
11.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
11.1
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
11.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
11.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
11.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
10.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
10.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
10.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
10.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
10.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
10.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.4
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
10.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
10.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
10.3
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.3
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
10.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
10.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
10.2
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
10.1
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
10.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
10.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.0
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.9
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.9
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
9.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.8
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
9.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
9.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.6
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
9.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
9.6
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
9.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
9.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.4
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
9.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
9.3
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
9.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
9.2
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.0
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
8.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
8.9
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.9
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
8.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
8.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
8.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
8.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
8.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
8.6
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
8.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.0
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
7.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
7.7
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
7.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
7.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
7.5
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
7.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
7.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
6.9
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
6.8
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
6.7
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
6.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
6.1
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
6.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
5.9
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
5.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
5.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
5.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
5.7
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.6
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
5.6
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
5.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
5.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
5.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
5.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
4.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
4.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
4.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
4.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
4.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
3.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
2.7
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
2.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
1.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYRM9 is validated prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
39.4
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
33.6
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
32.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
31.3
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
30.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
29.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
28.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
27.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
27.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
25.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
25.4
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
23.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
23.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
22.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
21.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
21.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
21.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
21.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
20.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
20.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
20.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
20.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
20.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
19.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
19.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
19.4
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
19.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
18.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
18.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
18.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
18.1
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
18.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
18.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
17.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.9
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.7
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
17.6
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
17.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
17.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
16.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
16.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
16.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
15.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
15.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
15.4
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
15.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
15.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
15.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
14.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
14.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
14.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
14.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
14.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
13.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.2
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
13.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.9
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
12.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.8
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
12.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
11.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
11.9
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
11.9
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
11.7
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
11.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
11.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
10.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.6
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
10.4
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
10.3
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
9.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
9.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
8.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
8.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
8.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
7.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
7.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
7.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
7.0
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
6.7
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
6.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
6.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
5.7
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
4.1
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
LYRM9 is potential prognostic, high expression is favorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.8
Number of samples
282
Samples
Sample
Description
TPM
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
91.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
85.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
65.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
64.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
59.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
58.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
58.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
56.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
54.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
54.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
53.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
52.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
52.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
51.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
50.8
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
49.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
46.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
46.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
46.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
46.3
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
45.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
45.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
45.2
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
44.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
44.7
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
44.4
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
44.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
43.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
43.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
42.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
42.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
42.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
42.1
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
42.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
41.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
41.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
41.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
40.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
40.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
40.1
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
40.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
39.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
39.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
38.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
38.7
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
38.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
38.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
38.4
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
38.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
38.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
38.0
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
37.7
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
37.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
37.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
36.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
36.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
36.4
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
36.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
35.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
35.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
35.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
35.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
35.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
34.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
34.4
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
34.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
33.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
33.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
33.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
33.5
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
33.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
33.0
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
32.3
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
32.2
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
32.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
32.1
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
31.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
31.9
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
31.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
31.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
31.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
31.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
31.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
31.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
30.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
30.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
30.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
30.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
30.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
30.2
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
30.1
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
30.1
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
29.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
29.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
29.5
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
29.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
29.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
29.0
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
28.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
28.9
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
28.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
28.6
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
28.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
28.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
28.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
27.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
27.7
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
27.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
27.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
27.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
27.3
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
27.2
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
27.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
26.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
26.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
26.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
26.7
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
26.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
26.2
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
26.1
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
25.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
25.6
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
25.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
25.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
25.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
25.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
25.1
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
25.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
24.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
24.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
24.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
24.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
24.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
23.9
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
23.9
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
23.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
23.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
23.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
23.5
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
23.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
23.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
23.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
23.1
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
22.8
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
22.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
22.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
22.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
22.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
22.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
22.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
22.2
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
22.1
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
22.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
22.0
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
21.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
21.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
21.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
21.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
21.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
21.5
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
21.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
21.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
21.3
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
21.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
20.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
20.8
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
20.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
20.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
20.7
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
20.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
20.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
20.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
20.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
20.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
20.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
20.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
20.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
20.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
20.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
20.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
20.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
19.9
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
19.9
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
19.9
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
19.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
19.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
19.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
18.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.3
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
18.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
18.0
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
17.7
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.6
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
17.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
17.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
17.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
17.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.8
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
16.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
16.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
16.1
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
16.0
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
16.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
15.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
15.9
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.9
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
15.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
15.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
15.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.1
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
15.1
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
14.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
14.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
14.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
14.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
14.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
13.3
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
13.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
13.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
12.3
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
12.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.8
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
11.8
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
11.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
11.6
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
11.5
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
11.4
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
11.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
11.1
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
10.7
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
10.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
10.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
9.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
9.5
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
9.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
9.4
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
9.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
8.9
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.9
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
8.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
8.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
8.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
7.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
7.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
7.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
7.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
7.0
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
6.9
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
6.0
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
5.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
5.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
5.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
4.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
3.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
3.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
3.2
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
3.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0002270011
Tumor
3.0
CPT0078660003
Tumor
1.2
CPT0007870001
Normal
0.8
CPT0088970003
Tumor
0.8
CPT0001180009
Tumor
0.8
CPT0064400001
Normal
0.7
CPT0079410003
Tumor
0.7
CPT0078800003
Tumor
0.7
CPT0086950003
Tumor
0.7
CPT0078530001
Normal
0.7
CPT0000780007
Tumor
0.7
CPT0078940001
Normal
0.6
CPT0078670001
Normal
0.6
CPT0077140001
Normal
0.6
CPT0092310003
Normal
0.6
CPT0086370003
Normal
0.6
CPT0081620001
Normal
0.6
CPT0011410003
Tumor
0.6
CPT0025920001
Normal
0.6
CPT0087040003
Tumor
0.5
CPT0010170001
Normal
0.5
CPT0079430001
Normal
0.5
CPT0086820003
Tumor
0.5
CPT0000790001
Normal
0.5
CPT0085670003
Tumor
0.5
CPT0092740003
Normal
0.5
CPT0002370001
Normal
0.5
CPT0023360001
Normal
0.4
CPT0025060001
Normal
0.4
CPT0088920001
Normal
0.4
CPT0026410003
Tumor
0.4
CPT0012770003
Normal
0.4
CPT0014350001
Normal
0.4
CPT0088900003
Tumor
0.4
CPT0088640003
Normal
0.3
CPT0001230001
Normal
0.3
CPT0012640003
Normal
0.3
CPT0089480003
Normal
0.3
CPT0001500009
Tumor
0.3
CPT0066430001
Normal
0.3
CPT0086870003
Tumor
0.3
CPT0026420001
Normal
0.3
CPT0086970003
Normal
0.3
CPT0010110003
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0079300001
Normal
0.3
CPT0012570003
Normal
0.2
CPT0063330001
Normal
0.2
CPT0010160003
Tumor
0.2
CPT0012090003
Normal
0.2
CPT0079000001
Normal
0.2
CPT0092800003
Normal
0.2
CPT0082010001
Normal
0.2
CPT0001550001
Normal
0.2
CPT0009080003
Normal
0.2
CPT0006440003
Tumor
0.2
CPT0019160001
Normal
0.2
CPT0065820001
Normal
0.2
CPT0020020001
Normal
0.2
CPT0077500001
Normal
0.2
CPT0063640001
Normal
0.2
CPT0009020003
Normal
0.1
CPT0075570001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0010120001
Normal
0.1
CPT0079480003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0025110003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0013790003
Normal
0.1
CPT0006950001
Normal
0.1
CPT0020130001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0001350001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0001510001
Normal
0.1
CPT0079180003
Tumor
0.0
CPT0001540009
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0088630003
Tumor
0.0
CPT0075720003
Tumor
0.0
CPT0078830003
Tumor
0.0
CPT0000890001
Normal
0.0
CPT0006530001
Normal
0.0
CPT0015730003
Tumor
0.0
CPT0025880003
Tumor
-0.1
CPT0023710001
Normal
-0.1
CPT0000870016
Tumor
-0.1
CPT0007320003
Tumor
-0.1
CPT0069000003
Tumor
-0.1
CPT0012180003
Tumor
-0.1
CPT0092160003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0014370004
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0002350011
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0089040001
Normal
-0.2
CPT0014130001
Normal
-0.2
CPT0086890003
Normal
-0.2
CPT0088500001
Normal
-0.2
CPT0088690003
Tumor
-0.2
CPT0018250001
Normal
-0.2
CPT0081600003
Tumor
-0.2
CPT0084560003
Tumor
-0.2
CPT0001260009
Tumor
-0.3
CPT0012920003
Normal
-0.3
CPT0012900004
Tumor
-0.3
CPT0017410003
Tumor
-0.3
CPT0086030003
Tumor
-0.3
CPT0011240003
Tumor
-0.3
CPT0086830003
Normal
-0.3
CPT0065750003
Tumor
-0.3
CPT0025050003
Tumor
-0.3
CPT0079270003
Tumor
-0.4
CPT0015810003
Tumor
-0.4
CPT0076350001
Normal
-0.4
CPT0025350003
Tumor
-0.4
CPT0001190001
Normal
-0.4
CPT0088760003
Tumor
-0.4
CPT0079230003
Tumor
-0.4
CPT0066480003
Tumor
-0.4
CPT0009060003
Tumor
-0.4
CPT0065430003
Tumor
-0.4
CPT0064370003
Tumor
-0.4
CPT0086360003
Tumor
-0.4
CPT0075130003
Tumor
-0.4
CPT0012370003
Tumor
-0.4
CPT0019130003
Tumor
-0.5
CPT0012290003
Normal
-0.5
CPT0006630003
Tumor
-0.5
CPT0076330003
Tumor
-0.5
CPT0017850003
Tumor
-0.5
CPT0065870003
Tumor
-0.5
CPT0019990003
Tumor
-0.5
CPT0025580004
Tumor
-0.5
CPT0088710001
Normal
-0.5
CPT0088570001
Normal
-0.5
CPT0001340003
Tumor
-0.5
CPT0000660001
Normal
-0.5
CPT0078990003
Tumor
-0.5
CPT0007470001
Normal
-0.5
CPT0012670003
Tumor
-0.5
CPT0075170001
Normal
-0.5
CPT0063630003
Tumor
-0.6
CPT0077320001
Normal
-0.6
CPT0065810003
Tumor
-0.6
CPT0065930003
Tumor
-0.6
CPT0014450004
Tumor
-0.6
CPT0063320003
Tumor
-0.6
CPT0000640003
Tumor
-0.6
CPT0084590001
Normal
-0.7
CPT0023690003
Tumor
-0.7
CPT0077110003
Tumor
-0.7
CPT0001220008
Tumor
-0.7
CPT0089020003
Tumor
-0.7
CPT0025610001
Normal
-0.7
CPT0075560003
Tumor
-0.8
CPT0024670003
Tumor
-0.8
CPT0092730003
Tumor
-0.8
CPT0024680001
Normal
-0.8
CPT0079380003
Tumor
-0.8
CPT0006900003
Tumor
-0.8
CPT0088550004
Tumor
-0.8
CPT0012280003
Tumor
-0.9
CPT0012550003
Tumor
-0.9
CPT0081990003
Tumor
-0.9
CPT0077310003
Tumor
-0.9
CPT0092190003
Normal
-0.9
CPT0092790003
Tumor
-0.9
CPT0017450001
Normal
-0.9
CPT0007860003
Tumor
-1.0
CPT0012080003
Tumor
-1.0
CPT0092290003
Tumor
-1.1
CPT0069160003
Tumor
-1.1
CPT0020120003
Tumor
-1.1
CPT0015910003
Tumor
-1.2
CPT0001270001
Normal
-1.2
CPT0089460004
Tumor
-1.2
CPT0065690003
Tumor
-1.2
CPT0025170003
Tumor
-1.3
CPT0088480003
Tumor
-1.3
CPT0078510003
Tumor
-1.3
CPT0021240003
Tumor
-1.4
CPT0081880003
Tumor
-1.4
CPT0066470004
Tumor
-1.4
CPT0078930003
Tumor
-1.5
CPT0025290003
Tumor
-1.6
CPT0071150004
Tumor
-1.8
CPT0014160003
Tumor
-2.0
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
