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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PET117 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
40.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
31.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
28.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
28.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
27.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
27.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
27.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
26.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
25.9
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
25.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
24.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
24.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
24.4
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
23.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
22.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
21.6
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
21.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
21.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
21.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
20.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
20.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
19.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
19.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
19.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
19.2
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
19.1
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
19.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
19.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
18.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
18.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
18.1
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
18.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
17.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
17.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
17.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
17.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
16.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
16.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
16.4
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
16.3
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
16.1
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
16.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
15.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
15.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
15.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
15.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
15.1
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
14.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
14.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
14.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
14.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
14.8
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
14.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
14.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
14.6
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
14.4
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
14.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
14.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
14.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
14.1
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
14.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.9
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
13.9
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
13.9
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
13.5
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
13.4
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
13.4
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
13.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
13.0
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
12.9
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
12.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
12.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
12.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
12.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
12.5
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
12.4
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
12.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
12.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
12.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
12.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
12.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
11.9
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
11.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
11.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
11.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
11.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
11.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
11.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
11.3
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
11.2
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
11.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
11.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
11.1
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
11.1
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
11.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
11.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
11.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
11.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
11.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
10.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
10.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
10.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
10.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
10.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
10.6
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
10.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
10.6
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
10.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
10.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
10.2
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
10.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
10.2
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
10.2
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
10.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.1
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
10.1
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
10.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
10.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
10.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
10.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
10.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
10.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
9.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
9.9
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
9.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
9.7
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
9.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
9.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
9.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
9.6
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
9.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
9.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
9.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
9.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
9.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
9.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
9.5
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
9.3
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
9.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
9.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
9.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
9.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
9.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
9.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
9.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
9.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
9.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
9.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
9.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
9.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
8.8
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
8.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
8.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
8.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
8.7
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
8.7
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
8.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
8.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
8.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.5
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
8.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
8.4
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
8.4
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
8.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
8.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
8.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
8.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
8.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
8.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
8.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
8.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
8.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
8.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
8.0
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
7.9
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
7.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
7.8
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
7.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
7.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
7.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.7
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
7.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
7.7
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
7.7
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
7.7
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
7.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
7.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
7.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
7.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
7.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
7.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
7.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
7.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
7.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
7.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
7.3
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
7.3
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
7.2
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
7.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.1
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
7.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.1
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
7.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
7.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
7.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7.0
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
7.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
7.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
7.0
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
6.9
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
6.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.9
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
6.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
6.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
6.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
6.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
6.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
6.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
6.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
6.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
6.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
6.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
6.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
6.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
6.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
6.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
6.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
6.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.4
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
6.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6.3
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
6.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6.3
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
6.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
6.2
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.2
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
6.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
6.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
6.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
6.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
6.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
5.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
5.8
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
5.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
5.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
5.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
5.7
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
5.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
5.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
5.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
5.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
5.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
5.6
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
5.5
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.5
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
5.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
5.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
5.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
5.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
5.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
5.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
5.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.3
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
5.3
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
5.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
5.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.3
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.2
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
5.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
5.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
5.1
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
4.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
4.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
4.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
4.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
4.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
4.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
4.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
4.6
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4.5
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
4.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
4.5
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
4.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
4.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
4.4
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
4.4
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
4.4
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
4.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
4.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
4.3
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
4.3
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
4.2
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4.2
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
4.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
4.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
4.0
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
4.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
4.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
3.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
3.8
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
3.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
3.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
3.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
3.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
2.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
2.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
2.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
2.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
2.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
2.3
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
2.2
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
2.1
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PET117 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.9
Number of samples
231
Samples
Sample
Description
TPM
DO45127
0 years, male, NA, stage:3, dead, 420 days
98.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
31.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
27.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
24.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
23.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
22.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
22.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
21.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
21.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
20.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
20.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
19.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
19.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
18.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
18.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
18.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
18.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
18.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
18.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
18.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
17.7
DO45303
0 years, female, NA, stage:3, alive, 990 days
17.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
17.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
16.9
DO23508
0 years, female, NA, stage:2, alive, 390 days
16.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
16.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
16.3
DO48723
0 years, male, NA, stage:1, alive, 600 days
16.3
DO45285
0 years, male, NA, stage:3, alive, 480 days
16.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
16.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
15.9
DO23542
0 years, male, NA, stage:3, alive, 960 days
15.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
14.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
14.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
14.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
14.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
14.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
14.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
14.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
14.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
14.3
DO45211
0 years, male, NA, stage:3, alive, 240 days
14.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
14.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
14.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
13.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
13.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
13.7
DO50791
0 years, female, NA, stage:1, dead, 480 days
13.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
13.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
13.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
13.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
12.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
12.9
DO23511
0 years, female, NA, stage:3, dead, 180 days
12.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
12.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
12.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
12.7
DO45155
0 years, male, NA, stage:2, alive, 2160 days
12.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
12.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
12.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
12.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
12.5
DO45139
0 years, male, NA, stage:3, alive, 1320 days
12.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
12.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
12.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
12.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
12.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
12.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
12.2
DO23526
0 years, male, NA, stage:3, alive, 1050 days
12.2
DO45131
0 years, male, NA, stage:4, dead, 360 days
12.1
DO23521
0 years, male, NA, stage:3, alive, 1110 days
12.1
DO45259
0 years, male, NA, stage:3, alive, 330 days
11.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.9
DO50783
0 years, male, NA, stage:3, alive, 480 days
11.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
11.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
11.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
11.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
11.6
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
11.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
11.5
DO45245
0 years, female, NA, stage:2, dead, 240 days
11.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
11.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
11.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
11.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
11.1
DO45297
0 years, female, NA, stage:4, dead, 1260 days
11.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
10.9
DO50776
0 years, male, NA, stage:1, alive, 690 days
10.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
10.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
10.7
DO45163
0 years, male, NA, stage:2, alive, 960 days
10.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
10.6
DO50857
0 years, male, NA, stage:2, alive, 210 days
10.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
10.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
10.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
10.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
10.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
10.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
10.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
10.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
10.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
10.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
10.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
10.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
9.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
9.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
9.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
9.7
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.7
DO48736
0 years, female, NA, stage:1, alive, 600 days
9.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
9.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
9.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
9.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
9.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.5
DO45223
0 years, male, NA, stage:4, alive, 1020 days
9.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
9.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
9.4
DO45183
0 years, female, NA, stage:2, dead, 570 days
9.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
9.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
9.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
9.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
9.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
9.3
DO45125
0 years, male, NA, stage:3, alive, 1680 days
9.3
DO45169
0 years, male, NA, stage:3, alive, 1350 days
9.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
9.2
DO50778
0 years, male, NA, stage:4, alive, 630 days
9.2
DO50789
0 years, female, NA, stage:2, alive, 570 days
9.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
9.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
9.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
8.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
8.9
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
8.8
DO45095
0 years, male, NA, stage:2, alive, 1620 days
8.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
8.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
8.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
8.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
8.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
8.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
8.6
DO45221
0 years, female, NA, stage:4, dead, 390 days
8.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
8.5
DO45153
0 years, female, NA, stage:2, alive, 1380 days
8.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
8.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.4
DO48700
0 years, female, NA, stage:2, alive, 810 days
8.4
DO50818
0 years, male, NA, stage:2, alive, 510 days
8.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
8.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
8.3
DO48701
0 years, male, NA, stage:2, alive, 780 days
8.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
8.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
8.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
8.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
8.2
DO23529
0 years, male, NA, stage:4, alive, 930 days
8.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
8.0
DO45157
0 years, male, NA, stage:2, alive, 1980 days
8.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
8.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
7.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
7.8
DO45133
0 years, male, NA, stage:3, dead, 660 days
7.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
7.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
7.7
DO45233
0 years, male, NA, stage:3, alive, 900 days
7.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
7.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
7.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
7.3
DO23528
0 years, female, NA, stage:2, alive, 1020 days
7.2
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
7.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
7.1
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.0
DO50808
0 years, male, NA, stage:2, alive, 570 days
7.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
6.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
6.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
6.8
DO45195
0 years, male, NA, stage:1, alive, 390 days
6.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
6.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
6.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
6.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
6.6
DO45181
0 years, female, NA, stage:2, alive, 1200 days
6.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
6.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
6.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
6.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
6.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
6.5
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.4
DO45247
0 years, female, NA, stage:2, alive, 210 days
6.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6.2
DO23546
0 years, male, NA, stage:2, alive, 1050 days
6.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
6.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
6.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
6.0
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.0
DO23534
0 years, male, NA, stage:2, alive, 840 days
6.0
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6.0
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.9
DO48733
0 years, male, NA, stage:2, alive, 600 days
5.7
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
5.6
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.6
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
5.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
5.3
DO45215
0 years, male, NA, stage:2, alive, 1170 days
5.3
DO45103
0 years, male, NA, stage:3, alive, 450 days
5.3
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
4.8
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
4.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
4.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
4.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
4.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.8
DO48727
0 years, female, NA, stage:2, dead, 390 days
3.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
2.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
2.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
698
Normal
1.2
815
Tumor
1.1
867
Tumor
1.0
484
Normal
0.9
411
Tumor
0.8
868
Normal
0.8
915
Tumor
0.7
488
Normal
0.7
648
Normal
0.7
171
Tumor
0.7
981
Tumor
0.7
1015
Tumor
0.7
746
Normal
0.7
944
Normal
0.6
494
Normal
0.6
955
Tumor
0.6
526
Normal
0.6
1045
Tumor
0.6
513
Tumor
0.6
862
Normal
0.5
452
Normal
0.5
286
Normal
0.5
464
Normal
0.5
483
Tumor
0.5
756
Normal
0.5
414
Normal
0.5
172
Normal
0.5
342
Normal
0.5
498
Normal
0.5
664
Normal
0.4
466
Normal
0.4
212
Normal
0.4
456
Normal
0.4
954
Normal
0.4
518
Normal
0.4
148
Normal
0.4
956
Normal
0.4
514
Normal
0.4
424
Normal
0.4
861
Tumor
0.4
413
Tumor
0.4
953
Tumor
0.4
284
Normal
0.4
716
Normal
0.4
534
Normal
0.4
666
Normal
0.4
426
Normal
0.4
952
Normal
0.4
468
Normal
0.3
423
Tumor
0.3
186
Normal
0.3
662
Normal
0.3
714
Normal
0.3
351
Tumor
0.3
686
Normal
0.3
525
Tumor
0.3
416
Normal
0.3
745
Tumor
0.3
755
Tumor
0.3
1013
Tumor
0.3
938
Normal
0.3
388
Normal
0.3
978
Normal
0.3
554
Normal
0.3
344
Normal
0.3
493
Tumor
0.2
616
Normal
0.2
568
Normal
0.2
354
Normal
0.2
427
Tumor
0.2
721
Tumor
0.2
722
Normal
0.2
428
Normal
0.2
228
Normal
0.2
524
Normal
0.2
352
Normal
0.2
778
Normal
0.2
392
Normal
0.2
866
Normal
0.2
864
Normal
0.2
672
Normal
0.2
227
Tumor
0.2
356
Normal
0.2
937
Tumor
0.2
358
Normal
0.2
824
Normal
0.2
357
Tumor
0.2
523
Tumor
0.2
162
Normal
0.2
328
Normal
0.1
663
Tumor
0.1
617
Tumor
0.1
696
Normal
0.1
394
Normal
0.1
863
Tumor
0.1
546
Normal
0.1
922
Normal
0.1
1016
Normal
0.1
516
Normal
0.1
618
Normal
0.1
422
Normal
0.1
112
Tumor
0.1
857
Tumor
0.1
858
Normal
0.1
537
Tumor
0.1
465
Tumor
0.0
1014
Normal
0.0
364
Normal
0.0
224
Normal
0.0
445
Tumor
0.0
818
Normal
0.0
533
Tumor
0.0
786
Normal
0.0
567
Tumor
0.0
573
Tumor
0.0
984
Normal
0.0
977
Tumor
0.0
314
Normal
0.0
147
Tumor
0.0
491
Tumor
0.0
627
Tumor
0.0
492
Normal
0.0
553
Tumor
0.0
943
Tumor
0.0
851
Tumor
0.0
353
Tumor
0.0
188
Normal
0.0
823
Tumor
0.0
628
Normal
0.0
412
Normal
0.0
951
Tumor
0.0
538
Normal
0.0
396
Normal
0.0
852
Normal
-0.1
415
Tumor
-0.1
983
Tumor
-0.1
285
Tumor
-0.1
312
Normal
-0.1
874
Normal
-0.1
297
Tumor
-0.1
635
Tumor
-0.1
421
Tumor
-0.1
636
Normal
-0.1
647
Tumor
-0.1
363
Tumor
-0.1
873
Tumor
-0.1
341
Tumor
-0.1
785
Tumor
-0.1
327
Tumor
-0.1
925
Tumor
-0.1
343
Tumor
-0.1
816
Normal
-0.1
425
Tumor
-0.1
433
Tumor
-0.1
386
Normal
-0.1
128
Normal
-0.1
161
Tumor
-0.1
331
Tumor
-0.1
912
Normal
-0.1
777
Tumor
-0.1
517
Tumor
-0.1
1046
Normal
-0.2
432
Normal
-0.2
451
Tumor
-0.2
1044
Normal
-0.2
661
Tumor
-0.2
113
Tumor
-0.2
615
Tumor
-0.2
558
Normal
-0.2
278
Normal
-0.2
125
Tumor
-0.2
187
Tumor
-0.2
355
Tumor
-0.2
914
Normal
-0.2
446
Normal
-0.2
444
Normal
-0.2
185
Tumor
-0.2
572
Normal
-0.2
545
Tumor
-0.2
865
Tumor
-0.2
126
Normal
-0.2
463
Tumor
-0.3
455
Tumor
-0.3
926
Normal
-0.3
665
Tumor
-0.3
528
Normal
-0.3
671
Tumor
-0.3
111
Normal
-0.3
391
Tumor
-0.3
387
Tumor
-0.3
982
Normal
-0.3
916
Normal
-0.3
114
Normal
-0.3
877
Tumor
-0.3
642
Normal
-0.3
434
Normal
-0.3
911
Tumor
-0.3
436
Normal
-0.4
641
Tumor
-0.4
123
Tumor
-0.4
127
Tumor
-0.4
515
Tumor
-0.4
124
Normal
-0.4
431
Tumor
-0.4
448
Normal
-0.4
564
Normal
-0.4
467
Tumor
-0.4
924
Normal
-0.4
713
Tumor
-0.4
283
Tumor
-0.4
311
Tumor
-0.4
884
Normal
-0.5
695
Tumor
-0.5
563
Tumor
-0.5
878
Normal
-0.5
882
Normal
-0.5
527
Tumor
-0.5
395
Tumor
-0.5
298
Normal
-0.5
393
Tumor
-0.5
883
Tumor
-0.5
913
Tumor
-0.5
435
Tumor
-0.5
1043
Tumor
-0.5
487
Tumor
-0.5
497
Tumor
-0.6
571
Tumor
-0.6
685
Tumor
-0.6
918
Normal
-0.6
923
Tumor
-0.7
277
Tumor
-0.7
332
Normal
-0.7
211
Tumor
-0.7
715
Tumor
-0.7
443
Tumor
-0.7
223
Tumor
-0.7
535
Tumor
-0.8
817
Tumor
-0.9
574
Normal
-0.9
536
Normal
-0.9
313
Tumor
-0.9
881
Tumor
-0.9
385
Tumor
-1.0
557
Tumor
-1.1
921
Tumor
-1.1
814
Normal
-1.2
447
Tumor
-1.3
697
Tumor
-1.3
917
Tumor
-1.5
813
Tumor
-1.5
471
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
473
Tumor
N/A
232
Normal
N/A
474
Normal
N/A
477
Tumor
N/A
478
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
365
Tumor
N/A
366
Normal
N/A
367
Tumor
N/A
368
Normal
N/A
131
Tumor
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
135
Tumor
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
145
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
268
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
271
Tumor
N/A
272
Normal
N/A
957
Tumor
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
963
Tumor
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1042
Normal
N/A
1041
Tumor
N/A
975
Tumor
N/A
976
Normal
N/A
737
Tumor
N/A
738
Normal
N/A
741
Tumor
N/A
742
Normal
N/A
743
Tumor
N/A
744
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
213
Tumor
N/A
214
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
222
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
