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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS18 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2907.7
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
13821.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9566.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
9326.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
8737.4
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
8487.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
7929.2
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
7570.3
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
7512.8
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
7391.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7368.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
7285.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
7032.2
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
6983.9
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
6961.3
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6946.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
6844.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6799.8
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
6480.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6461.3
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
6425.9
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6271.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
6226.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
6176.2
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
6153.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
6041.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
5946.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
5945.2
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
5877.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
5779.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
5771.4
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
5732.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
5636.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
5631.9
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
5613.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
5607.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
5568.4
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5516.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
5473.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5404.2
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
5279.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
5262.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
5164.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5073.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5004.8
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
4966.1
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
4907.7
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
4821.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
4818.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
4790.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
4771.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4746.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
4701.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
4673.6
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
4663.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
4581.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
4562.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
4450.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
4418.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4350.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
4340.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
4332.8
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
4323.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
4272.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4243.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
4241.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
4161.9
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
4153.5
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
4113.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
4112.8
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
4021.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
4005.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
3985.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
3967.1
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
3900.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
3853.2
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
3850.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
3845.6
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
3832.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
3816.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
3814.3
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
3775.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
3749.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3744.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
3737.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
3688.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
3687.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
3681.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
3644.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
3608.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
3603.8
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
3602.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3602.1
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
3571.1
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3558.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3551.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
3516.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
3477.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
3457.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
3428.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
3410.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
3400.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
3359.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
3349.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
3312.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
3293.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
3293.5
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
3285.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
3275.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3260.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
3256.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
3244.6
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
3222.0
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
3156.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
3145.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
3138.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3122.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
3094.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
3086.3
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
3081.2
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
3053.2
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
3023.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
3017.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3013.2
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
3012.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
2998.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
2970.7
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
2964.2
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2955.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
2953.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
2938.1
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
2931.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
2921.8
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2917.9
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
2909.3
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
2905.3
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
2904.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
2890.7
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
2870.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
2849.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
2848.9
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
2847.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
2830.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2816.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
2781.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
2778.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
2777.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
2765.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
2730.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2717.3
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
2697.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
2661.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
2639.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2628.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2625.5
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
2597.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
2589.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2586.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
2583.1
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2581.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
2577.8
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
2572.1
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2565.1
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
2563.9
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
2546.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
2546.0
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
2533.6
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
2514.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
2507.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
2506.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
2487.3
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
2483.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
2469.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
2451.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
2437.2
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
2435.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2424.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
2412.4
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2412.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
2405.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2402.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
2387.1
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
2373.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
2370.7
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
2369.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
2360.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
2359.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
2358.4
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
2356.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
2348.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
2344.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
2338.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2334.2
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
2324.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2312.5
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
2299.6
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
2295.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2294.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2279.7
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
2266.6
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
2265.4
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
2261.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
2216.3
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
2207.5
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2197.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
2175.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
2165.1
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
2151.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
2134.9
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
2134.7
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
2132.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
2131.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
2122.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
2105.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
2099.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
2098.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
2085.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
2083.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
2062.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
2059.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
2048.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
2047.5
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
2047.3
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
2043.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
2042.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2038.6
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2033.9
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
2028.7
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1999.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1995.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1990.5
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
1989.4
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
1987.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
1986.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1982.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1969.2
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
1964.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
1963.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
1962.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
1949.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1933.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1932.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
1929.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
1922.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
1920.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
1895.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
1893.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
1890.7
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
1886.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1882.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
1876.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
1856.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
1843.4
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1827.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
1827.5
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
1824.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1822.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1817.6
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
1814.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
1805.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1803.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
1803.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
1797.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1796.7
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1790.8
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
1778.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
1769.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1769.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1765.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
1747.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1745.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
1730.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1724.8
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
1721.1
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
1719.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
1718.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
1706.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
1704.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
1696.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
1666.1
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
1653.5
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
1653.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
1642.8
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1637.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1623.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
1614.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
1610.4
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1609.9
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
1607.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
1602.0
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
1600.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
1556.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
1555.6
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
1555.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
1552.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
1539.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
1537.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
1529.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
1525.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
1517.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
1509.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1507.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1496.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
1493.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1460.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1458.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
1450.0
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
1441.1
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
1420.3
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
1418.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
1415.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
1404.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
1389.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1387.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1366.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1345.4
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
1327.1
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
1315.8
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
1312.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
1297.9
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
1288.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
1279.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1279.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1273.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1258.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1255.9
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1255.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
1249.4
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
1239.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
1227.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1220.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
1219.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
1210.9
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1210.7
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1206.6
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
1199.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1187.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
1166.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1164.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1163.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
1133.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1092.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1085.7
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1080.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1074.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
1072.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
1056.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1018.0
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
1016.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
1002.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
1001.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
986.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
960.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
952.5
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
939.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
904.8
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
898.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
876.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
866.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
812.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
803.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
759.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
RPS18 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
2408.1
Number of samples
231
Samples
Sample
Description
TPM
DO50785
0 years, male, NA, stage:4, dead, 90 days
12165.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
8319.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
7547.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
7540.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7336.2
DO45247
0 years, female, NA, stage:2, alive, 210 days
7208.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
6369.5
DO45189
0 years, female, NA, stage:2, alive, 1200 days
6206.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
5886.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
5799.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
5720.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
5426.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
5376.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
5277.2
DO45267
0 years, male, NA, stage:3, dead, 570 days
5234.5
DO23533
0 years, male, NA, stage:2, alive, 900 days
5187.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
5163.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
4889.7
DO45251
0 years, female, NA, stage:2, alive, 900 days
4870.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
4798.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
4691.1
DO45303
0 years, female, NA, stage:3, alive, 990 days
4641.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
4635.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
4562.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
4517.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
4381.7
DO50855
0 years, male, NA, stage:2, alive, 570 days
4279.9
DO45289
0 years, female, NA, stage:3, alive, 360 days
3979.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
3949.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
3913.2
DO48672
0 years, male, NA, stage:2, alive, 450 days
3892.1
DO45209
0 years, male, NA, stage:4, alive, 1350 days
3861.1
DO48706
0 years, male, NA, stage:2, alive, 870 days
3787.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
3713.5
DO45161
0 years, male, NA, stage:2, dead, 540 days
3661.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
3628.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
3601.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
3530.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
3520.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
3516.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
3510.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
3489.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
3478.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
3451.5
DO23530
0 years, male, NA, stage:4, dead, 180 days
3427.2
DO48747
0 years, male, NA, stage:3, alive, 540 days
3397.8
DO50783
0 years, male, NA, stage:3, alive, 480 days
3345.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
3323.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
3313.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
3294.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
3245.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
3241.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
3233.3
DO45219
0 years, male, NA, stage:2, alive, 1080 days
3210.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
3201.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
3177.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
3153.4
DO45211
0 years, male, NA, stage:3, alive, 240 days
3116.2
DO45301
0 years, male, NA, stage:2, dead, 1440 days
3081.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
3075.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
3068.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
2977.7
DO23511
0 years, female, NA, stage:3, dead, 180 days
2959.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
2922.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
2882.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
2791.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
2758.5
DO45141
0 years, male, NA, stage:2, alive, 1320 days
2757.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
2746.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
2725.8
DO45273
0 years, male, NA, stage:2, alive, 480 days
2713.6
DO48736
0 years, female, NA, stage:1, alive, 600 days
2687.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
2680.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
2680.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
2659.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
2657.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
2654.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
2580.9
DO45103
0 years, male, NA, stage:3, alive, 450 days
2578.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
2552.9
DO48741
0 years, male, NA, stage:3, alive, 240 days
2538.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
2514.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
2510.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
2501.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
2497.4
DO45135
0 years, male, NA, stage:1, alive, 1410 days
2482.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
2450.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
2441.4
DO45191
0 years, female, NA, stage:2, alive, 1200 days
2369.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
2337.6
DO48727
0 years, female, NA, stage:2, dead, 390 days
2323.0
DO45185
0 years, male, NA, stage:2, alive, 600 days
2297.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
2262.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
2253.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
2241.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
2239.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
2232.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
2225.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
2203.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
2190.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
2188.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
2175.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
2156.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
2138.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
2120.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
2119.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
2114.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
2101.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
2088.5
DO50844
0 years, male, NA, stage:4, alive, 300 days
2069.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
2045.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
2038.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
2024.2
DO45243
0 years, female, NA, stage:3, alive, 930 days
2007.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
2004.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1992.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
1988.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
1978.3
DO45253
0 years, male, NA, stage:2, alive, 870 days
1976.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
1957.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
1933.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
1926.8
DO45091
0 years, male, NA, stage:2, dead, 1320 days
1902.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
1895.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
1844.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
1843.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
1825.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
1822.3
DO45265
0 years, male, NA, stage:3, alive, 1020 days
1821.8
DO23548
0 years, female, NA, stage:1, alive, 840 days
1807.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
1794.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
1788.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
1786.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
1784.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
1777.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
1760.3
DO48720
0 years, female, NA, stage:2, alive, 570 days
1760.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
1745.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
1720.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
1702.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
1681.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
1674.4
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1670.7
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1670.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
1645.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
1644.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
1610.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
1592.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
1591.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
1590.6
DO50800
0 years, male, NA, stage:2, alive, 510 days
1576.9
DO45121
0 years, male, NA, stage:3, alive, 1530 days
1564.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
1550.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
1531.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
1523.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
1521.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
1498.1
DO45181
0 years, female, NA, stage:2, alive, 1200 days
1474.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
1449.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1445.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
1410.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1376.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
1364.4
DO48742
0 years, male, NA, stage:2, alive, 600 days
1360.8
DO45169
0 years, male, NA, stage:3, alive, 1350 days
1347.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
1344.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
1329.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
1323.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
1314.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
1314.7
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1314.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
1298.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
1293.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
1270.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
1269.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
1268.7
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1265.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
1263.3
DO48716
0 years, male, NA, stage:2, alive, 720 days
1257.4
DO45149
0 years, female, NA, stage:2, alive, 1260 days
1233.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
1220.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
1190.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
1185.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
1182.5
DO50819
0 years, female, NA, stage:2, alive, 510 days
1181.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
1140.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
1128.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
1127.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
1120.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
1119.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
1118.1
DO50845
0 years, male, NA, stage:3, alive, 210 days
1110.5
DO50774
0 years, female, NA, stage:2, alive, 720 days
1063.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
1057.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
1054.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1045.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
977.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
965.6
DO23541
0 years, male, NA, stage:2, alive, 930 days
959.1
DO48761
0 years, male, NA, stage:2, alive, 870 days
952.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
948.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
943.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
937.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
933.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
922.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
898.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
895.5
DO45129
0 years, male, NA, stage:3, alive, 1470 days
873.1
DO45159
0 years, male, NA, stage:3, alive, 1470 days
870.1
DO45099
0 years, male, NA, stage:3, alive, 1590 days
857.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
855.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
851.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
838.8
DO50807
0 years, male, NA, stage:1, alive, 540 days
836.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
819.8
DO23509
0 years, male, NA, stage:3, dead, 780 days
815.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
808.8
DO23532
0 years, female, NA, stage:1, alive, 960 days
806.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
792.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
781.7
DO45111
0 years, male, NA, stage:2, alive, 1590 days
769.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
733.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
731.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
729.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
720.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
707.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
693.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
691.6
DO23552
0 years, female, NA, stage:1, alive, 810 days
534.1
DO45107
0 years, female, NA, stage:2, alive, 1710 days
519.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
504.2
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
557
Tumor
0.6
537
Tumor
0.6
327
Tumor
0.4
636
Normal
0.4
367
Tumor
0.4
285
Tumor
0.4
567
Tumor
0.4
413
Tumor
0.4
1021
Tumor
0.4
393
Tumor
0.4
661
Tumor
0.4
965
Tumor
0.3
113
Tumor
0.3
131
Tumor
0.3
851
Tumor
0.3
331
Tumor
0.3
494
Normal
0.3
467
Tumor
0.3
983
Tumor
0.3
473
Tumor
0.3
955
Tumor
0.3
815
Tumor
0.3
497
Tumor
0.3
523
Tumor
0.3
481
Tumor
0.3
865
Tumor
0.3
937
Tumor
0.3
957
Tumor
0.3
912
Normal
0.2
135
Tumor
0.2
524
Normal
0.2
568
Normal
0.2
172
Normal
0.2
616
Normal
0.2
493
Tumor
0.2
967
Tumor
0.2
944
Normal
0.2
353
Tumor
0.2
1014
Normal
0.2
727
Tumor
0.2
223
Tumor
0.2
864
Normal
0.2
514
Normal
0.2
488
Normal
0.2
186
Normal
0.2
1027
Tumor
0.2
484
Normal
0.2
162
Normal
0.2
376
Normal
0.2
492
Normal
0.2
572
Normal
0.2
136
Normal
0.2
414
Normal
0.2
951
Tumor
0.2
743
Tumor
0.2
723
Tumor
0.2
628
Normal
0.2
721
Tumor
0.2
267
Tumor
0.2
558
Normal
0.2
777
Tumor
0.2
571
Tumor
0.2
387
Tumor
0.2
212
Normal
0.2
395
Tumor
0.2
964
Normal
0.2
394
Normal
0.2
756
Normal
0.2
685
Tumor
0.2
824
Normal
0.2
356
Normal
0.2
526
Normal
0.2
385
Tumor
0.2
195
Tumor
0.2
443
Tumor
0.2
471
Tumor
0.2
786
Normal
0.2
648
Normal
0.2
314
Normal
0.2
913
Tumor
0.2
922
Normal
0.2
332
Normal
0.2
738
Normal
0.2
984
Normal
0.2
1025
Tumor
0.2
528
Normal
0.2
564
Normal
0.2
1046
Normal
0.2
518
Normal
0.2
866
Normal
0.2
462
Normal
0.2
545
Tumor
0.2
148
Normal
0.2
573
Tumor
0.2
368
Normal
0.2
953
Tumor
0.1
286
Normal
0.1
516
Normal
0.1
617
Tumor
0.1
852
Normal
0.1
696
Normal
0.1
926
Normal
0.1
966
Normal
0.1
424
Normal
0.1
114
Normal
0.1
1026
Normal
0.1
778
Normal
0.1
958
Normal
0.1
647
Tumor
0.1
412
Normal
0.1
615
Tumor
0.1
421
Tumor
0.1
882
Normal
0.1
392
Normal
0.1
191
Tumor
0.1
128
Normal
0.1
362
Normal
0.1
142
Normal
0.1
728
Normal
0.1
938
Normal
0.1
1032
Normal
0.1
451
Tumor
0.1
873
Tumor
0.1
517
Tumor
0.1
722
Normal
0.1
664
Normal
0.1
618
Normal
0.1
981
Tumor
0.1
533
Tumor
0.1
978
Normal
0.1
466
Normal
0.1
411
Tumor
0.1
426
Normal
0.1
436
Normal
0.1
671
Tumor
0.1
697
Tumor
0.1
918
Normal
0.1
396
Normal
0.1
785
Tumor
0.1
724
Normal
0.1
1044
Normal
0.1
968
Normal
0.1
672
Normal
0.1
211
Tumor
0.1
355
Tumor
0.1
298
Normal
0.1
884
Normal
0.1
422
Normal
0.1
428
Normal
0.1
448
Normal
0.1
1042
Normal
0.1
858
Normal
0.1
515
Tumor
0.1
698
Normal
0.1
525
Tumor
0.1
1022
Normal
0.1
278
Normal
0.1
384
Normal
0.1
388
Normal
0.1
312
Normal
0.1
171
Tumor
0.1
954
Normal
0.1
126
Normal
0.1
878
Normal
0.1
474
Normal
0.1
124
Normal
0.1
284
Normal
0.1
425
Tumor
0.1
818
Normal
0.1
427
Tumor
0.1
132
Normal
0.1
686
Normal
0.1
862
Normal
0.1
642
Normal
0.1
943
Tumor
0.1
227
Tumor
0.1
358
Normal
0.1
745
Tumor
0.1
666
Normal
0.1
662
Normal
0.1
187
Tumor
0.1
464
Normal
0.1
952
Normal
0.1
527
Tumor
0.1
214
Normal
0.1
366
Normal
0.1
535
Tumor
0.1
472
Normal
0.1
963
Tumor
0.1
714
Normal
0.1
342
Normal
0.1
112
Tumor
0.1
228
Normal
0.1
344
Normal
0.1
188
Normal
0.1
431
Tumor
0.1
452
Normal
0.1
196
Normal
0.1
665
Tumor
0.1
137
Tumor
0.1
423
Tumor
0.1
258
Normal
0.1
737
Tumor
0.1
536
Normal
0.1
916
Normal
0.1
232
Normal
0.1
534
Normal
0.1
138
Normal
0.1
817
Tumor
0.1
1015
Tumor
0.1
742
Normal
0.1
277
Tumor
0.1
574
Normal
0.1
483
Tumor
0.1
111
Normal
0.1
546
Normal
0.1
1016
Normal
0.1
482
Normal
0.0
463
Tumor
0.0
635
Tumor
0.0
445
Tumor
0.0
446
Normal
0.0
461
Tumor
0.0
218
Normal
0.0
976
Normal
0.0
487
Tumor
0.0
554
Normal
0.0
716
Normal
0.0
883
Tumor
0.0
145
Tumor
0.0
641
Tumor
0.0
468
Normal
0.0
982
Normal
0.0
447
Tumor
0.0
924
Normal
0.0
363
Tumor
0.0
861
Tumor
0.0
478
Normal
0.0
563
Tumor
0.0
432
Normal
0.0
221
Tumor
0.0
1013
Tumor
0.0
1028
Normal
0.0
755
Tumor
0.0
663
Tumor
0.0
923
Tumor
0.0
328
Normal
0.0
352
Normal
0.0
222
Normal
0.0
361
Tumor
0.0
746
Normal
0.0
433
Tumor
0.0
917
Tumor
0.0
416
Normal
0.0
283
Tumor
0.0
415
Tumor
0.0
477
Tumor
0.0
513
Tumor
0.0
498
Normal
0.0
351
Tumor
0.0
185
Tumor
0.0
695
Tumor
0.0
147
Tumor
0.0
538
Normal
0.0
881
Tumor
0.0
1031
Tumor
0.0
816
Normal
0.0
257
Tumor
0.0
386
Normal
0.0
146
Normal
0.0
161
Tumor
0.0
715
Tumor
0.0
915
Tumor
0.0
456
Normal
0.0
444
Normal
0.0
868
Normal
0.0
213
Tumor
0.0
975
Tumor
0.0
231
Tumor
0.0
262
Normal
0.0
465
Tumor
0.0
713
Tumor
0.0
125
Tumor
0.0
455
Tumor
0.0
364
Normal
0.0
141
Tumor
0.0
874
Normal
0.0
375
Tumor
0.0
391
Tumor
0.0
272
Normal
0.0
857
Tumor
0.0
297
Tumor
0.0
343
Tumor
0.0
127
Tumor
0.0
867
Tumor
0.0
914
Normal
0.0
365
Tumor
0.0
1043
Tumor
0.0
271
Tumor
-0.1
224
Normal
-0.1
217
Tumor
-0.1
268
Normal
-0.1
956
Normal
-0.1
313
Tumor
-0.1
354
Normal
-0.1
877
Tumor
-0.1
434
Normal
-0.1
311
Tumor
-0.1
435
Tumor
-0.1
123
Tumor
-0.1
261
Tumor
-0.1
744
Normal
-0.1
823
Tumor
-0.1
921
Tumor
-0.1
553
Tumor
-0.1
357
Tumor
-0.1
1041
Tumor
-0.1
814
Normal
-0.1
977
Tumor
-0.1
341
Tumor
-0.1
863
Tumor
-0.1
383
Tumor
-0.1
491
Tumor
-0.1
192
Normal
-0.1
925
Tumor
-0.1
911
Tumor
-0.2
813
Tumor
-0.2
627
Tumor
-0.2
1045
Tumor
-0.2
741
Tumor
-0.3
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.