HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:100.1 nTPM
HPA Brain:131.7 nTPM
GTEx:100.1 nTPM
FANTOM5:109.6 Scaled Tags Per Million
Pig:86.3 nTPM
Mouse:78.6 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 131.7
Sample id Sample description nTPM
Hippocampus
nTPM: 110.8
1911 Female, age 85, right hemisphere 126.7
2621 Female, age 67, right hemisphere 116.8
2148 Female, age 91, left hemisphere 114.5
1898 Male, age 80, left hemisphere 111.0
1855 Male, age 76, left hemisphere 108.2
2529 Female, age 94, left hemisphere 87.6
Dentate gyrus
nTPM: 100.8
1927 Female, age 91, both hemispheres 125.3
2531 Female, age 67, both hemispheres 118.2
2010 Male, age 76, both hemispheres 107.8
2246 Female, age 85, both hemispheres 94.2
2528 Male, age 74, both hemispheres 86.0
2530 Female, age 94, left hemisphere 73.4
Entorhinal gyrus
nTPM: 74.7
2764 Male, age 80, right hemisphere 95.4
1787 Male, age 76, left hemisphere 81.1
2117 Female, age 91, right hemisphere 77.4
2686 Male, age 75, right hemisphere 70.9
1938 Female, age 85, left hemisphere 69.8
2613 Female, age 94, left hemisphere 53.9
Hippocampus, CA1
nTPM: 131.7
2749 Male, age 80, left hemisphere 203.1
2045 Male, age 76, both hemispheres 133.0
1873 Female, age 85, both hemispheres 118.0
2527 Male, age 74, both hemispheres 110.5
2082 Female, age 91, right hemisphere 94.1
Hippocampus, CA2
nTPM: 98.9
1963 Male, age 80, left hemisphere 135.6
2113 Female, age 91, right hemisphere 103.6
1892 Male, age 76, both hemispheres 102.2
2249 Male, age 74, both hemispheres 87.1
1940 Female, age 85, left hemisphere 86.7
2437 Female, age 94, left hemisphere 78.3
Hippocampus, CA3
nTPM: 123.7
2137 Male, age 80, left hemisphere 209.2
2620 Female, age 94, left hemisphere 133.1
2861 Female, age 67, both hemispheres 132.7
1867 Male, age 76, both hemispheres 94.2
1891 Female, age 85, both hemispheres 91.1
2436 Male, age 74, both hemispheres 81.8
Parahippocampal cortex
nTPM: 83.3
2245 Female, age 91, both hemispheres 114.5
1933 Female, age 85, both hemispheres 107.2
2250 Female, age 67, right hemisphere 95.2
2693 Female, age 94, both hemispheres 93.8
2018 Male, age 76, both hemispheres 91.3
1850 Male, age 80, both hemispheres 76.7
2622 Female, age 67, right hemisphere 70.5
2532 Female, age 72, left hemisphere 70.3
1990 Female, age 91, right hemisphere 59.7
2692 Male, age 74, both hemispheres 54.1
Perirhinal gyrus
nTPM: 101.5
1794 Male, age 80, right hemisphere 110.8
1841 Female, age 85, right hemisphere 102.7
2521 Female, age 94, right hemisphere 99.5
1847 Female, age 91, left hemisphere 98.5
2848 Male, age 76, right hemisphere 95.9
Subiculum
nTPM: 80.7
1901 Male, age 80, both hemispheres 106.3
2729 Female, age 91, right hemisphere 93.3
2042 Male, age 76, both hemispheres 84.9
1977 Female, age 85, both hemispheres 80.7
2619 Male, age 74, both hemispheres 64.7
2438 Female, age 94, left hemisphere 54.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 100.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 100.1
Samples: 197

Max nTPM: 214.7
Min nTPM: 6.8
Std nTPM: 39.5
Median nTPM: 96.2
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 214.7
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 191.5
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 189.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 187.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 185.4
GTEX-1H3VE-0011-R1a-SM-A9G1K 40-49 years, male 184.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 183.0
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 181.7
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 180.3
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 177.5
GTEX-1A8G6-0011-R1a-SM-7P8PC 60-69 years, male 174.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 109.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 109.6
FF:10169-103B7 60 years, female 142.2
FF:10153-102I9 76 years, female 77.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 86.3
Pig sample Sample description nTPM
Subiculum
nTPM: 58.8
Samples: 4

Max nTPM: 67.7
Min nTPM: 53.2
Sample A Female 67.7
Sample B Female 53.2
Sample C Male 56.6
Sample D Male 57.8
Dorsal hippocampus
nTPM: 82.7
Samples: 4

Max nTPM: 100.4
Min nTPM: 54.0
Sample A Female 85.5
Sample B Female 100.4
Sample C Male 54.0
Sample D Male 91.0
Entorhinal cortex
nTPM: 58.0
Samples: 4

Max nTPM: 82.0
Min nTPM: 42.2
Sample A Female 57.1
Sample B Female 42.2
Sample C Male 82.0
Sample D Male 50.5
Ventral hippocampus
nTPM: 86.3
Samples: 4

Max nTPM: 110.1
Min nTPM: 67.9
Sample A Female 84.0
Sample B Female 67.9
Sample C Male 110.1
Sample D Male 83.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 78.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 73.2
Samples: 4

Max nTPM: 88.5
Min nTPM: 58.6
Sample A Male 63.3
Sample B Male 58.6
Sample C Female 82.2
Sample D Female 88.5
Hippocampal formation
nTPM: 78.6
Samples: 4

Max nTPM: 88.7
Min nTPM: 71.3
Sample A Male 88.7
Sample B Male 77.5
Sample C Female 77.0
Sample D Female 71.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
70795509 Antisense, RP_050712_01_F12, Mouse strain C57BL/6J (56 days, male) 1.7

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