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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
110.2
nTPM
HPA Brain:
254.3
nTPM
GTEx:
110.2
nTPM
FANTOM5:
142.9
Scaled Tags Per Million
Pig:
201.2
nTPM
Mouse:
457.7
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
254.3
Sample id
Sample description
nTPM
Amygdala nTPM: 110.4
2517
Female, age 94, left hemisphere
202.0
1987
Female, age 91, left hemisphere
156.3
2514
Male, age 75, right hemisphere
105.4
2695
Female, age 67, right hemisphere
53.1
2814
Male, age 76, right hemisphere
35.1
Basal amygdala nTPM: 254.3
2243
Female, age 91, right hemisphere
407.6
2685
Female, age 94, left hemisphere
366.6
2827
Female, age 67, right hemisphere
252.0
2110
Male, age 80, left hemisphere
199.4
2609
Male, age 75, right hemisphere
160.8
1955
Male, age 76, both hemispheres
139.7
Central amygdala nTPM: 118.0
2826
Female, age 94, left hemisphere
245.8
2239
Male, age 80, left hemisphere
158.3
2515
Male, age 75, right hemisphere
91.7
2701
Female, age 91, right hemisphere
61.5
1905
Male, age 76, both hemispheres
32.7
Corticomedial amygdala nTPM: 226.2
2242
Female, age 91, right hemisphere
393.2
2829
Male, age 80, left hemisphere
283.0
2535
Female, age 67, right hemisphere
216.3
2429
Female, age 94, left hemisphere
205.3
2428
Male, age 75, right hemisphere
134.0
2240
Male, age 76, both hemispheres
125.3
Lateral amygdala nTPM: 147.6
2534
Female, age 94, left hemisphere
304.9
2256
Male, age 80, left hemisphere
199.1
2830
Female, age 67, right hemisphere
119.9
2255
Female, age 91, right hemisphere
112.8
2516
Male, age 75, right hemisphere
82.1
1883
Male, age 76, both hemispheres
67.0
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
110.2
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 110.2
Samples: 152
Max nTPM: 335.0
Min nTPM: 2.7
Std nTPM: 68.9
Median nTPM: 95.5
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
335.0
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
316.6
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
293.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
276.4
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
273.8
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
268.2
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
267.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
266.7
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
241.3
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
240.4
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
212.7
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
209.1
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
206.4
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
203.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
200.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
199.8
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
199.2
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
197.2
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
190.3
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
187.0
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
184.0
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
178.8
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
176.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
174.1
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
173.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
172.1
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
171.3
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
168.1
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
166.2
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
165.4
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
164.3
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
163.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
163.0
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
162.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
160.6
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
159.9
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
159.6
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
158.1
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
156.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
155.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
153.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
152.9
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
151.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
151.5
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
147.8
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
147.0
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
144.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
139.8
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
138.5
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
137.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
136.2
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
134.8
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
134.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
132.0
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
131.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
129.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
124.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
124.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
121.4
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
121.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
119.0
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
118.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
117.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
112.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
112.7
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
112.3
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
110.3
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
109.7
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
108.4
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
105.0
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
104.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
99.9
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
98.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
98.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
98.2
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
96.2
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
94.8
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
94.1
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
93.2
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
92.0
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
88.9
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
88.0
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
86.0
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
85.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
84.8
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
84.8
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
84.3
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
76.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
76.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
74.0
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
73.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
72.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
71.9
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
71.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
70.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
68.7
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
66.5
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
64.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
64.0
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
63.8
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
63.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
63.0
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
62.8
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
62.0
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
61.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
61.5
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
60.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
60.1
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
59.7
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
57.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
57.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
56.8
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
54.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
54.0
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
52.7
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
51.8
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
51.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
50.9
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
50.8
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
50.6
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
50.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
49.3
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
47.9
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
47.7
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
46.6
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
45.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
44.8
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
43.2
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
43.2
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
42.7
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
41.2
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
40.8
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
40.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
39.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
39.4
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
39.4
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
39.3
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
37.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
35.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
34.9
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
34.5
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
34.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
33.2
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
31.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
31.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
28.9
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
28.5
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
16.2
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
14.9
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
12.1
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
8.9
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
2.7
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.