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BRAIN HYPOTHALAMUS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX CHOROID PLEXUS HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN OLFACTORY BULB PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Hypothalamus
Brain methods
HYPOTHALAMUS - Expression summary
Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units. Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set. If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas HPA, Genotype-Tissue Expression GTEx portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets. The mRNA expression levels in pig brain are based on RNA-seq data generated by the Human Protein Atlas, and for mouse brain HPA data and in situ hybridization generated by the Allen brain atlas dataset are reported.

Scroll down to view mRNA expression data in more detail.

Consensus:448.6 nTPM
HPA Brain:410.5 nTPM
GTEx:448.6 nTPM
Pig:261.4 nTPM
Mouse:387.6 nTPM
Allen mouse:7.7 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION
Explore single cell type data

HYPOTHALAMUS - HPA Brain RNA-seq
Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

410.5
Sample id Sample description nTPM
Arcuate nucleus
nTPM: 410.5
2226 Male, age 75, left hemisphere 572.0
1961 Female, age 42, unknown 248.9
Dorsomedial nucleus
nTPM: 240.4
2041 Female, age 72, unknown 320.3
1989 Male, age 62, unknown 210.0
2017 Female, age 42, unknown 190.9
Lateral hypothalamic area
nTPM: 329.4
1791 Male, age 80, right hemisphere 391.0
2228 Male, age 66, unknown 351.1
2412 Male, age 62, unknown 301.5
2271 Male, age 75, both hemispheres 273.9
Mammillary body
nTPM: 249.9
1923 Female, age 72, unknown 318.9
1948 Female, age 72, unknown 260.7
2413 Male, age 66, unknown 238.2
1834 Female, age 42, unknown 225.4
1945 Male, age 80, right hemisphere 206.4
Paraventricular nucleus
nTPM: 319.5
2700 Male, age 62, unknown 319.5
Preoptic area
nTPM: 234.1
1907 Male, age 80, right hemisphere 271.9
1861 Female, age 42, unknown 225.9
2414 Female, age 72, unknown 204.4
Supraoptic nucleus
nTPM: 343.2
2835 Female, age 72, unknown 461.7
2043 Male, age 62, unknown 293.6
1894 Female, age 72, unknown 274.3
Ventromedial nucleus
nTPM: 236.9
1982 Female, age 72, unknown 240.5
1822 Female, age 42, unknown 233.3

HYPOTHALAMUS - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

448.6
GTEx sample id Sample description nTPM
Brain - Hypothalamus
Average nTPM: 448.6
Samples: 257

Max nTPM: 907.2
Min nTPM: 213.7
Std nTPM: 123.1
Median nTPM: 434.5
GTEX-1RLM8-0011-R8a-SM-EYYXR 50-59 years, male 907.2
GTEX-1A3MX-0011-R8a-SM-7P8PI 60-69 years, male 882.0
GTEX-13NYB-0011-R8a-SM-5KM4R 40-49 years, male 834.3
GTEX-13PLJ-0011-R8a-SM-GJ3QG 60-69 years, female 802.7
GTEX-1O9I2-0011-R8a-SM-F2TAX 50-59 years, male 749.3
GTEX-117YW-0011-R8a-SM-GINAB 50-59 years, male 744.1
GTEX-1GN2E-0011-R8a-SM-CE6RK 60-69 years, male 743.6
GTEX-1B8L1-0011-R8b-SM-7P8ST 60-69 years, male 728.4
GTEX-1F88E-0011-R8a-SM-CJI2H 60-69 years, female 720.1
GTEX-X261-0011-R8A-SM-4E3I5 50-59 years, male 688.7
GTEX-1J8Q2-0011-R8b-SM-D4P2E 60-69 years, male 685.0
GTEX-13OVH-0011-R8b-SM-5MR35 70-79 years, male 681.8
GTEX-11GSO-0011-R8b-SM-GJ3PM 60-69 years, male 679.2
GTEX-13FXS-0011-R8a-SM-5J1MN 50-59 years, male 660.9
GTEX-1JMLX-0011-R8a-SM-G9EPQ 50-59 years, male 656.2
GTEX-117XS-0011-R8b-SM-GHWOD 60-69 years, male 641.9
GTEX-1I1CD-0011-R8b-SM-CJI3X 60-69 years, female 634.5
GTEX-145MH-0011-R8a-SM-5PNUL 50-59 years, male 628.8
GTEX-1GF9V-0011-R8b-SM-CE6RB 60-69 years, male 623.3
GTEX-1F6IF-0011-R8a-SM-9OSX5 60-69 years, male 617.0
GTEX-1JMOU-0011-R8b-SM-F2TA9 60-69 years, female 613.7
GTEX-1IKK5-0011-R8b-SM-CJI45 60-69 years, male 612.1
GTEX-1LKK1-0011-R8a-SM-F341O 50-59 years, female 601.4
GTEX-139TS-0011-R8a-SM-5J1NP 60-69 years, male 599.5
GTEX-11ZTS-0011-R8a-SM-57WDI 60-69 years, female 599.3
GTEX-1F75W-0011-R8a-SM-9QEI4 60-69 years, male 598.2
GTEX-WVLH-0011-R8A-SM-3MJFC 50-59 years, male 597.8
GTEX-11WQC-0011-R8b-SM-57WCH 60-69 years, male 596.0
GTEX-1F6I4-0011-R8a-SM-9QEIA 60-69 years, male 594.1
GTEX-144GL-0011-R8a-SM-5Q5B1 50-59 years, male 593.5
GTEX-11DXW-0011-R8a-SM-GIN8T 40-49 years, male 592.7
GTEX-1MJK2-0011-R8a-SM-F341I 50-59 years, male 592.3
GTEX-11DXY-0011-R8a-SM-DO11M 60-69 years, male 587.1
GTEX-1A8G6-0011-R8a-SM-7P8PD 60-69 years, male 585.9
GTEX-1JN1M-0011-R8b-SM-F6485 60-69 years, female 584.9
GTEX-11O72-0011-R8a-SM-GJ3R9 40-49 years, male 582.8
GTEX-Z93S-0011-R8a-SM-4RGNL 50-59 years, male 581.7
GTEX-QVUS-0011-R8A-SM-3GAD7 60-69 years, female 581.2
GTEX-1LG7Y-0011-R8b-SM-F3K5C 50-59 years, male 572.1
GTEX-13QIC-0011-R8b-SM-5O9CV 60-69 years, female 570.7
GTEX-13CIG-0011-R8b-SM-5LZX5 50-59 years, male 563.5
GTEX-1A8G7-0011-R8a-SM-7P8S6 60-69 years, male 560.2
GTEX-1P4AB-0011-R8a-SM-F341R 50-59 years, male 558.9
GTEX-145LU-0011-R8b-SM-5PNZG 50-59 years, male 558.3
GTEX-1GTWX-0011-R8a-SM-CE6RM 60-69 years, male 552.8
GTEX-13RTJ-0011-R8b-SM-5O9DL 60-69 years, male 552.6
GTEX-16YQH-0011-R8a-SM-7DUFB 30-39 years, male 552.1
GTEX-X585-0011-R8A-SM-46MUX 50-59 years, male 549.9
GTEX-1I1GQ-0011-R8a-SM-C1YRS 50-59 years, male 545.6
GTEX-1LH75-0011-R8b-SM-F2TB2 50-59 years, female 544.8
GTEX-WHSE-0011-R8A-SM-3P5Z1 20-29 years, male 544.5
GTEX-1C6VR-0011-R8b-SM-7MXUF 60-69 years, male 543.2
GTEX-17HG3-0011-R8a-SM-79OK7 30-39 years, female 543.0
GTEX-1LSVX-0011-R8a-SM-F2TB3 60-69 years, male 541.4
GTEX-13N1W-0011-R8a-SM-5MR56 70-79 years, male 541.3
GTEX-1KD4Q-0011-R8a-SM-F341N 40-49 years, male 540.9
GTEX-1C6WA-0011-R8b-SM-7P8S7 60-69 years, male 540.0
GTEX-1LSNL-0011-R8b-SM-F2TAH 50-59 years, male 537.5
GTEX-1BAJH-0011-R8a-SM-7MXUB 70-79 years, male 535.8
GTEX-1R9PO-0011-R8a-SM-F2TA3 60-69 years, female 535.4
GTEX-1399T-0011-R8b-SM-5IJD8 60-69 years, male 534.8
GTEX-14BMV-0011-R8a-SM-G9ERM 50-59 years, male 534.8
GTEX-15EO6-0011-R8a-SM-H6Q6R 50-59 years, male 533.2
GTEX-14DAQ-0011-R8a-SM-G9ERP 60-69 years, female 527.4
GTEX-11ZUS-0011-R8a-SM-5BC73 30-39 years, male 527.3
GTEX-1N2EE-0011-R8a-SM-F3K4X 60-69 years, male 524.8
GTEX-12ZZX-0011-R8a-SM-5DUW8 40-49 years, female 523.4
GTEX-1E1VI-0011-R8b-SM-ARU8E 50-59 years, male 521.5
GTEX-13O3Q-0011-R8b-SM-5KM2J 50-59 years, male 520.7
GTEX-11OF3-0011-R8b-SM-57WCS 60-69 years, male 520.0
GTEX-14PJO-0011-R8a-SM-6AJAL 60-69 years, male 519.1
GTEX-1B933-0011-R8a-SM-9QEGX 50-59 years, female 518.8
GTEX-1NV8Z-0011-R8b-SM-F3K3J 60-69 years, male 518.8
GTEX-131XH-0011-R8a-SM-5EGLL 50-59 years, male 517.1
GTEX-1HCVE-0011-R8a-SM-ARU7A 50-59 years, male 515.5
GTEX-17EVQ-0011-R8a-SM-7189T 70-79 years, male 515.4
GTEX-1HT8W-0011-R8b-SM-CM2SX 30-39 years, male 513.7
GTEX-1HGF4-0011-R8b-SM-CKZP9 60-69 years, male 511.1
GTEX-14753-0011-R8b-SM-5S2U1 60-69 years, male 498.6
GTEX-1KANB-0011-R8a-SM-F3K5N 50-59 years, male 498.1
GTEX-ZVZQ-0011-R8a-SM-51MR5 60-69 years, female 497.8
GTEX-13X6K-0011-R8b-SM-5PNZ4 60-69 years, female 497.4
GTEX-1F52S-0011-R8a-SM-9OSXA 60-69 years, female 495.9
GTEX-1MA7X-0011-R8a-SM-G9EQD 60-69 years, male 491.5
GTEX-1JMQJ-0011-R8a-SM-G8LKT 50-59 years, male 490.3
GTEX-1GN73-0011-R8b-SM-CKZNY 60-69 years, male 486.7
GTEX-13FLW-0011-R8b-SM-5J1MZ 50-59 years, male 485.7
GTEX-13PDP-0011-R8b-SM-5O9CS 60-69 years, male 484.4
GTEX-13OW5-0011-R8a-SM-5L3GQ 60-69 years, male 483.7
GTEX-1B8SG-0011-R8b-SM-7IGNW 50-59 years, male 482.2
GTEX-S7SE-0011-R8A-SM-F649T 50-59 years, male 481.6
GTEX-15CHQ-0011-R8b-SM-CNPO4 60-69 years, male 478.8
GTEX-1RQEC-0011-R8b-SM-F648X 60-69 years, male 478.1
GTEX-YFC4-0011-R8a-SM-4SOK3 40-49 years, female 476.1
GTEX-11WQK-0011-R8a-SM-5BC7C 50-59 years, male 475.8
GTEX-16NPV-0011-R8a-SM-7EPH8 50-59 years, female 474.4
GTEX-1HCU6-0011-R8a-SM-CJI3R 60-69 years, female 473.2
GTEX-13OW8-0011-R8a-SM-5L3G5 60-69 years, male 468.8
GTEX-OXRN-0011-R8A-SM-E9TI1 50-59 years, male 468.2
GTEX-1GF9W-0011-R8b-SM-9QEIR 60-69 years, male 467.3
GTEX-ZUA1-0011-R8b-SM-51MST 40-49 years, male 466.6
GTEX-111FC-0011-R8b-SM-GI4VS 60-69 years, male 464.4
GTEX-13SLW-0011-R8b-SM-5SI64 70-79 years, male 463.8
GTEX-13SLX-0011-R8b-SM-5PNWZ 50-59 years, female 460.5
GTEX-1AX9I-0011-R8a-SM-7P8PJ 60-69 years, male 460.0
GTEX-1HFI6-0011-R8a-SM-ARZLP 40-49 years, male 459.0
GTEX-1R46S-0011-R8a-SM-F3K4Q 60-69 years, female 459.0
GTEX-1313W-0011-R8a-SM-5DUVM 50-59 years, female 458.3
GTEX-ZXG5-0011-R8a-SM-57WD1 60-69 years, male 458.2
GTEX-1N5O9-0011-R8a-SM-F649C 60-69 years, male 458.1
GTEX-1QMI2-0011-R8a-SM-F3429 60-69 years, male 457.6
GTEX-WZTO-0011-R8A-SM-4E3II 40-49 years, male 457.4
GTEX-1192X-0011-R8b-SM-DO11U 50-59 years, male 452.6
GTEX-14ASI-0011-R8b-SM-5S2UB 60-69 years, male 452.2
GTEX-15ER7-0011-R8a-SM-7KUL2 20-29 years, female 451.9
GTEX-1NV5F-0011-R8b-SM-F647Z 60-69 years, female 450.6
GTEX-1B8SF-0011-R8b-SM-7P8SX 60-69 years, male 450.1
GTEX-1MCQQ-0011-R8b-SM-F341H 60-69 years, male 450.0
GTEX-ZAK1-0011-R8a-SM-H7OGE 50-59 years, female 449.7
GTEX-1477Z-0011-R8b-SM-5S2RG 60-69 years, male 446.0
GTEX-1N2DW-0011-R8a-SM-EY5YD 50-59 years, male 443.7
GTEX-17HII-0011-R8a-SM-79OK6 50-59 years, male 441.6
GTEX-1GZ4I-0011-R8b-SM-9WG76 50-59 years, male 440.1
GTEX-1GMR8-0011-R8a-SM-CKZNX 50-59 years, female 439.7
GTEX-14BIL-0011-R8b-SM-69LQK 50-59 years, male 439.1
GTEX-12WSA-0011-R8a-SM-5P9EX 60-69 years, male 438.8
GTEX-1N2EF-0011-R8a-SM-F6481 60-69 years, male 438.8
GTEX-1HB9E-0011-R8b-SM-A9G1O 50-59 years, male 436.7
GTEX-13JVG-0011-R8a-SM-5KM3E 60-69 years, male 434.5
GTEX-NL4W-0011-R8a-SM-2I3G4 50-59 years, male 433.5
GTEX-13G51-0011-R8b-SM-5LZZ4 60-69 years, male 432.3
GTEX-13NZA-0011-R8b-SM-5KM2Q 60-69 years, male 432.3
GTEX-1LVAO-0011-R8a-SM-F3K5J 60-69 years, male 429.9
GTEX-1JJEA-0011-R8a-SM-F3419 60-69 years, male 429.3
GTEX-1J1OQ-0011-R8a-SM-ACKVE 40-49 years, female 426.6
GTEX-1HSKV-0011-R8a-SM-CL54X 60-69 years, male 424.1
GTEX-13NYS-0011-R8a-SM-5MR5H 60-69 years, male 422.4
GTEX-1RDX4-0011-R8a-SM-G8LLT 50-59 years, female 422.4
GTEX-14C5O-0011-R8a-SM-5YYAG 60-69 years, male 422.2
GTEX-1EMGI-0011-R8b-SM-9QEID 60-69 years, male 422.1
GTEX-15SHU-0011-R8a-SM-H6Q7V 40-49 years, female 422.0
GTEX-QVJO-0011-R8A-SM-447C7 60-69 years, female 420.6
GTEX-1KWVE-0011-R8a-SM-F3K4V 30-39 years, male 416.6
GTEX-13OW7-0011-R8b-SM-5L3HR 50-59 years, male 416.5
GTEX-ZAJG-0011-R8a-SM-H6Q6K 50-59 years, female 415.2
GTEX-16Z82-0011-R8a-SM-7DUEX 60-69 years, male 414.9
GTEX-1F48J-0011-R8a-SM-9OSWW 50-59 years, female 414.3
GTEX-11DZ1-0011-R8b-SM-DNZZI 50-59 years, male 413.2
GTEX-11DYG-0011-R8a-SM-DO93F 60-69 years, male 413.0
GTEX-WL46-0011-R8B-SM-H7OHG 50-59 years, male 411.9
GTEX-X4XY-0011-R8A-SM-46MVC 60-69 years, male 410.8
GTEX-1I1GS-0011-R8b-SM-CKZPE 60-69 years, male 409.5
GTEX-14PJM-0011-R8b-SM-69LPD 50-59 years, female 406.8
GTEX-ZYY3-0011-R8a-SM-H7OHF 60-69 years, female 406.8
GTEX-11ONC-0011-R8b-SM-5NQ87 60-69 years, male 406.5
GTEX-14PN4-0011-R8a-SM-6EU1H 50-59 years, male 405.5
GTEX-1IY9M-0011-R8a-SM-EYYWW 60-69 years, male 405.5
GTEX-13VXU-0011-R8b-SM-GJ3RR 50-59 years, male 404.8
GTEX-18465-0011-R8b-SM-7LG6O 50-59 years, male 403.7
GTEX-132Q8-0011-R8b-SM-5DUWX 60-69 years, male 403.6
GTEX-1PPGY-0011-R8a-SM-F649R 60-69 years, male 401.7
GTEX-11NV4-0011-R8b-SM-GHWO4 60-69 years, male 399.8
GTEX-13X6I-0011-R8a-SM-5PNZF 60-69 years, male 399.7
GTEX-12126-0011-R8a-SM-GI4WV 20-29 years, male 399.3
GTEX-1GZHY-0011-R8b-SM-9OSWK 50-59 years, female 397.1
GTEX-12WSD-0011-R8b-SM-9QEGI 60-69 years, female 395.3
GTEX-14E7W-0011-R8b-SM-GQ1D6 70-79 years, male 394.9
GTEX-14JIY-0011-R8a-SM-6AJAP 60-69 years, male 393.7
GTEX-1RQED-0011-R8a-SM-G8LKO 60-69 years, male 392.3
GTEX-X4XX-0011-R8B-SM-46MWM 60-69 years, male 392.2
GTEX-1H3NZ-0011-R8a-SM-CKZP6 60-69 years, male 389.4
GTEX-1H1DG-0011-R8a-SM-CL54Z 70-79 years, male 387.6
GTEX-14LZ3-0011-R8b-SM-COH3M 60-69 years, female 384.9
GTEX-1H1ZS-0011-R8b-SM-A9SKA 70-79 years, male 384.8
GTEX-1GZ2Q-0011-R8a-SM-CE6RO 40-49 years, male 383.3
GTEX-13OW6-0011-R8a-SM-5L3GF 50-59 years, male 381.4
GTEX-1JMPZ-0011-R8b-SM-F341A 30-39 years, male 380.9
GTEX-131XW-0011-R8a-SM-5DUWY 50-59 years, female 379.8
GTEX-1I1HK-0011-R8b-SM-E8VN9 60-69 years, male 376.3
GTEX-1GN1U-0011-R8a-SM-CL537 50-59 years, female 376.1
GTEX-ZDXO-0011-R8a-SM-4WWD7 60-69 years, male 373.3
GTEX-Y8DK-0011-R8B-SM-EYYVQ 60-69 years, male 370.8
GTEX-1C64N-0011-R8b-SM-7MGXE 50-59 years, male 369.9
GTEX-12696-0011-R8a-SM-GINAP 60-69 years, male 369.8
GTEX-RVPV-0011-R8A-SM-F21II 60-69 years, male 369.8
GTEX-RNOR-0011-R8A-SM-EZ6MN 50-59 years, female 369.2
GTEX-13OVJ-0011-R8b-SM-5L3FS 50-59 years, female 368.9
GTEX-16GPK-0011-R8a-SM-79OMQ 60-69 years, male 368.0
GTEX-12WSM-0011-R8a-SM-5DUWJ 60-69 years, male 367.3
GTEX-1B996-0011-R8b-SM-79OOS 60-69 years, male 366.8
GTEX-13FLV-0011-R8a-SM-5LZZE 50-59 years, male 365.8
GTEX-14PQA-0011-R8b-SM-6AJAB 50-59 years, female 365.3
GTEX-16XZZ-0011-R8b-SM-7LT8S 60-69 years, male 364.5
GTEX-1LVA9-0011-R8a-SM-F3K5G 50-59 years, male 361.9
GTEX-1CB4H-0011-R8b-SM-CJI26 60-69 years, female 360.9
GTEX-T6MN-0011-R8A-SM-32QP3 50-59 years, male 359.3
GTEX-13OVL-0011-R8a-SM-5L3HH 50-59 years, male 357.0
GTEX-1CAV2-0011-R8a-SM-GRR24 40-49 years, female 356.5
GTEX-17EVP-0011-R8b-SM-7DUF9 40-49 years, male 356.3
GTEX-15RJE-0011-R8a-SM-H7OGM 40-49 years, male 355.0
GTEX-13O3O-0011-R8b-SM-5LUAL 60-69 years, female 354.5
GTEX-1ICLZ-0011-R8b-SM-ACKX4 60-69 years, male 353.7
GTEX-1CB4J-0011-R8a-SM-9QEHU 60-69 years, male 350.7
GTEX-1H3O1-0011-R8a-SM-CL555 60-69 years, male 349.9
GTEX-11EI6-0011-R8a-SM-DO93M 60-69 years, male 347.1
GTEX-1IDJH-0011-R8b-SM-ARZLL 70-79 years, male 346.8
GTEX-1HBPH-0011-R8b-SM-CL556 40-49 years, female 345.5
GTEX-1RAZS-0011-R8a-SM-F2TBI 50-59 years, male 343.6
GTEX-1CB4G-0011-R8b-SM-9WG7H 60-69 years, male 341.8
GTEX-1R9K4-0011-R8b-SM-F649L 60-69 years, male 338.5
GTEX-WWYW-0011-R8A-SM-3NB3S 50-59 years, female 336.2
GTEX-NPJ8-0011-R8a-SM-2HMLG 40-49 years, male 335.6
GTEX-11EMC-0011-R8b-SM-DO91Z 60-69 years, female 335.1
GTEX-15DCD-0011-R8b-SM-7KUEF 70-79 years, female 332.6
GTEX-13CF2-0011-R8b-SM-5IJCX 60-69 years, male 332.1
GTEX-1445S-0011-R8a-SM-5PNWX 60-69 years, male 332.0
GTEX-T5JC-0011-R8A-SM-32PLM 20-29 years, male 329.0
GTEX-11GS4-0011-R8b-SM-GI4XA 60-69 years, male 328.9
GTEX-1H1CY-0011-R8b-SM-CJI31 60-69 years, female 328.0
GTEX-1POEN-0011-R8b-SM-F647O 30-39 years, female 322.6
GTEX-147F4-0011-R8b-SM-5S2UN 50-59 years, male 321.2
GTEX-13X6J-0011-R8b-SM-5PNUA 50-59 years, male 320.1
GTEX-17F97-0011-R8a-SM-7DUET 50-59 years, male 318.5
GTEX-PWO3-0011-R8A-SM-2I5GD 60-69 years, female 317.8
GTEX-ZVT3-0011-R8b-SM-57WDJ 60-69 years, female 315.3
GTEX-15DYW-0011-R8b-SM-GRR3B 60-69 years, female 308.3
GTEX-ZAB4-0011-R8b-SM-4SOKF 40-49 years, male 306.1
GTEX-ZF28-0011-R8a-SM-4WWFW 60-69 years, male 305.7
GTEX-11ZU8-0011-R8b-SM-GHWOM 60-69 years, male 303.2
GTEX-11H98-0011-R8a-SM-5NQ8V 50-59 years, male 300.8
GTEX-11TTK-0011-R8b-SM-DO111 60-69 years, female 300.8
GTEX-1JN6P-0011-R8a-SM-F6499 60-69 years, male 298.1
GTEX-YJ89-0011-R8b-SM-4SOK8 60-69 years, male 296.3
GTEX-ZZPT-0011-R8a-SM-GQ1CW 50-59 years, male 296.1
GTEX-13PVQ-0011-R8a-SM-GJ3PT 50-59 years, male 293.1
GTEX-11GSP-0011-R8b-SM-5NQ79 60-69 years, female 291.9
GTEX-1QP6S-0011-R8a-SM-F649M 40-49 years, male 289.2
GTEX-1E2YA-0011-R8a-SM-CKZNG 50-59 years, male 285.9
GTEX-1CAMQ-0011-R8a-SM-ARU85 40-49 years, male 281.9
GTEX-1F75A-0011-R8a-SM-CL539 50-59 years, male 281.1
GTEX-13QJC-0011-R8b-SM-5S2U6 60-69 years, female 280.3
GTEX-1JMQK-0011-R8a-SM-G8LMS 60-69 years, male 277.7
GTEX-1GN1V-0011-R8a-SM-CKZNV 60-69 years, male 277.1
GTEX-1IKOH-0011-R8a-SM-A9SKG 60-69 years, female 276.1
GTEX-145LS-0011-R8b-SM-5PNXA 60-69 years, female 274.0
GTEX-P44H-0011-R8A-SM-2XCEL 40-49 years, male 270.9
GTEX-1PWST-0011-R8a-SM-F3K5P 70-79 years, male 254.1
GTEX-1QEPI-0011-R8a-SM-G8LLI 60-69 years, female 247.7
GTEX-1HBPI-0011-R8a-SM-A9G1S 50-59 years, male 247.0
GTEX-N7MS-0011-R8a-SM-2YUMK 60-69 years, male 244.5
GTEX-13112-0011-R8b-SM-664OV 50-59 years, male 241.2
GTEX-QDT8-0011-R8A-SM-G8W63 30-39 years, female 240.7
GTEX-XMD1-0011-R8A-SM-4AT48 60-69 years, male 240.0
GTEX-15G19-0011-R8b-SM-7KUL1 60-69 years, male 228.8
GTEX-1H23P-0011-R8b-SM-A9G1G 60-69 years, male 224.4
GTEX-1OJC4-0011-R8a-SM-F3K5B 50-59 years, female 220.4
GTEX-QMR6-0011-R8A-SM-32PKJ 50-59 years, male 213.7
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HYPOTHALAMUS - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

261.4
Pig sample Sample description nTPM
Hypothalamus
nTPM: 261.4
Samples: 4

Max nTPM: 311.2
Min nTPM: 234.2
Sample A Female 311.2
Sample B Female 246.6
Sample C Male 253.7
Sample D Male 234.2

HYPOTHALAMUS - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM. Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.

Max subtype nTPMi

Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.

387.6
Mouse sample Sample description nTPM
Hypothalamus
nTPM: 387.6
Samples: 4

Max nTPM: 439.8
Min nTPM: 354.5
Sample A Male 395.5
Sample B Male 439.8
Sample C Female 360.6
Sample D Female 354.5

HYPOTHALAMUS - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Max subtype Expression energyi

Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.

7.7
Allen experiment id Experiment description Expression energy
Hypothalamus
Expression energy: 7.7
75934529 Antisense, RP_060530_01_E05, Mouse strain C57BL/6J (56 days, male) 10.6
68499398 Antisense, RP_050118_01_E02, Mouse strain C57BL/6J (56 days, male) 4.7

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