HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:338.1 nTPM
HPA Brain:231.5 nTPM
GTEx:338.1 nTPM
FANTOM5:596.3 Scaled Tags Per Million
Pig:246.2 nTPM
Mouse:423.7 nTPM
Allen mouse:10.3 Expression energy
BRAIN - SINGLE CELL RNA EXPRESSION

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044708
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 231.5
Sample id Sample description nTPM
Hippocampus
nTPM: 207.2
1898 Male, age 80, left hemisphere 246.3
1855 Male, age 76, left hemisphere 229.4
2621 Female, age 67, right hemisphere 225.4
2529 Female, age 94, left hemisphere 205.5
2148 Female, age 91, left hemisphere 176.8
1911 Female, age 85, right hemisphere 159.4
Dentate gyrus
nTPM: 189.5
1927 Female, age 91, both hemispheres 219.1
2530 Female, age 94, left hemisphere 219.1
2010 Male, age 76, both hemispheres 208.8
2246 Female, age 85, both hemispheres 189.6
2531 Female, age 67, both hemispheres 153.7
2528 Male, age 74, both hemispheres 146.4
Entorhinal gyrus
nTPM: 185.9
2764 Male, age 80, right hemisphere 219.0
1938 Female, age 85, left hemisphere 203.4
1787 Male, age 76, left hemisphere 196.7
2117 Female, age 91, right hemisphere 171.3
2686 Male, age 75, right hemisphere 165.5
2613 Female, age 94, left hemisphere 159.6
Hippocampus, CA1
nTPM: 212.4
2749 Male, age 80, left hemisphere 308.8
2045 Male, age 76, both hemispheres 230.5
1873 Female, age 85, both hemispheres 189.1
2527 Male, age 74, both hemispheres 178.0
2082 Female, age 91, right hemisphere 155.7
Hippocampus, CA2
nTPM: 193.1
1892 Male, age 76, both hemispheres 252.1
1963 Male, age 80, left hemisphere 212.9
2437 Female, age 94, left hemisphere 193.8
1940 Female, age 85, left hemisphere 179.2
2249 Male, age 74, both hemispheres 168.1
2113 Female, age 91, right hemisphere 152.7
Hippocampus, CA3
nTPM: 205.2
2137 Male, age 80, left hemisphere 234.2
2436 Male, age 74, both hemispheres 224.8
1867 Male, age 76, both hemispheres 222.9
2620 Female, age 94, left hemisphere 189.8
2861 Female, age 67, both hemispheres 186.0
1891 Female, age 85, both hemispheres 173.5
Parahippocampal cortex
nTPM: 191.1
1850 Male, age 80, both hemispheres 249.6
2245 Female, age 91, both hemispheres 217.8
2532 Female, age 72, left hemisphere 194.7
1933 Female, age 85, both hemispheres 190.3
1990 Female, age 91, right hemisphere 188.1
2018 Male, age 76, both hemispheres 182.3
2250 Female, age 67, right hemisphere 182.2
2692 Male, age 74, both hemispheres 176.1
2622 Female, age 67, right hemisphere 167.3
2693 Female, age 94, both hemispheres 163.0
Perirhinal gyrus
nTPM: 231.5
1794 Male, age 80, right hemisphere 269.6
1847 Female, age 91, left hemisphere 264.6
1841 Female, age 85, right hemisphere 226.3
2848 Male, age 76, right hemisphere 207.3
2521 Female, age 94, right hemisphere 189.6
Subiculum
nTPM: 183.8
2438 Female, age 94, left hemisphere 209.5
1901 Male, age 80, both hemispheres 202.4
1977 Female, age 85, both hemispheres 184.9
2042 Male, age 76, both hemispheres 182.9
2619 Male, age 74, both hemispheres 181.5
2729 Female, age 91, right hemisphere 141.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 338.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 338.1
Samples: 255

Max nTPM: 611.6
Min nTPM: 141.3
Std nTPM: 74.0
Median nTPM: 332.6
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 611.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 588.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 540.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 540.2
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 534.0
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 524.3
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 519.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 513.1
GTEX-12126-0011-R1a-SM-GJ3Q8 20-29 years, male 494.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 491.7
GTEX-1O9I2-0011-R1a-SM-F2TAW 50-59 years, male 489.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 596.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 596.3
FF:10169-103B7 60 years, female 872.4
FF:10153-102I9 76 years, female 320.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 246.2
Pig sample Sample description nTPM
Subiculum
nTPM: 233.5
Samples: 4

Max nTPM: 302.1
Min nTPM: 199.9
Sample A Female 302.1
Sample B Female 199.9
Sample C Male 219.9
Sample D Male 212.2
Dorsal hippocampus
nTPM: 243.4
Samples: 4

Max nTPM: 317.5
Min nTPM: 192.6
Sample A Female 317.5
Sample B Female 232.7
Sample C Male 230.8
Sample D Male 192.6
Entorhinal cortex
nTPM: 218.9
Samples: 4

Max nTPM: 250.0
Min nTPM: 185.2
Sample A Female 250.0
Sample B Female 225.7
Sample C Male 214.7
Sample D Male 185.2
Ventral hippocampus
nTPM: 246.2
Samples: 4

Max nTPM: 317.6
Min nTPM: 164.5
Sample A Female 250.4
Sample B Female 164.5
Sample C Male 317.6
Sample D Male 252.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 423.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 402.7
Samples: 4

Max nTPM: 420.8
Min nTPM: 383.7
Sample A Male 407.0
Sample B Male 383.7
Sample C Female 399.3
Sample D Female 420.8
Hippocampal formation
nTPM: 423.7
Samples: 4

Max nTPM: 461.4
Min nTPM: 406.8
Sample A Male 411.6
Sample B Male 406.8
Sample C Female 414.9
Sample D Female 461.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 10.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.3
75934529 Antisense, RP_060530_01_E05, Mouse strain C57BL/6J (56 days, male) 13.6
68499398 Antisense, RP_050118_01_E02, Mouse strain C57BL/6J (56 days, male) 6.9

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