Expression of TMEM242 in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

TMEM242 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 3.86

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

4.3

Number of samples

362

Samples

Sample	Description	TPM
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	10.1
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	9.8
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	9.5
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	9.2
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	9.2
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	9.0
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	8.8
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	8.8
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	8.8
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	8.3
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	8.0
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	7.8
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	7.8
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	7.6
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	7.6
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	7.5
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	7.5
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	7.4
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	7.3
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	7.2
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	7.2
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	7.1
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	7.1
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	7.1
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	7.0
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	6.9
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	6.8
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	6.7
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	6.6
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	6.5
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	6.5
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	6.4
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	6.4
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	6.3
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	6.3
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	6.2
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	6.2
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	6.2
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	6.2
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	6.2
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	6.1
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	6.1
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	6.1
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	6.1
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	6.1
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	6.1
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	6.1
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	6.1
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	6.0
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	6.0
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	6.0
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	6.0
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	5.9
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	5.9
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	5.9
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	5.9
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	5.8
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	5.8
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	5.8
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	5.7
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	5.7
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	5.7
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	5.7
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	5.7
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	5.7
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	5.7
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	5.6
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	5.6
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	5.6
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	5.6
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	5.6
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	5.6
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	5.6
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	5.5
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	5.5
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	5.5
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	5.5
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	5.4
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	5.4
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	5.4
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	5.4
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	5.4
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	5.4
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	5.4
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	5.3
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	5.3
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	5.3
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	5.3
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	5.2
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	5.2
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	5.2
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	5.2
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	5.2
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	5.2
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	5.2
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	5.1
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	5.1
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	5.1
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	5.1
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	5.1
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	5.0
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	5.0
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	5.0
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	5.0
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	5.0
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	5.0
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	5.0
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	5.0
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	5.0
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	5.0
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	4.9
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	4.9
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	4.9
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	4.9
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	4.9
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	4.9
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	4.9
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	4.9
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	4.9
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	4.9
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	4.9
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	4.8
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	4.8
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	4.8
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	4.8
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	4.8
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	4.8
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	4.8
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	4.8
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	4.8
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	4.8
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	4.8
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	4.8
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	4.7
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	4.7
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	4.7
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	4.7
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	4.7
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	4.7
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	4.7
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	4.7
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	4.7
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	4.7
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	4.7
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	4.7
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	4.7
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	4.7
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	4.6
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	4.6
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	4.6
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	4.6
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	4.6
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	4.6
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	4.6
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	4.5
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	4.5
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	4.5
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	4.5
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	4.5
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	4.5
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	4.4
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	4.4
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	4.4
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	4.4
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	4.4
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	4.4
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	4.4
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	4.4
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	4.4
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	4.4
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	4.4
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	4.3
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	4.3
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	4.3
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	4.3
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	4.2
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	4.2
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	4.2
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	4.2
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	4.2
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	4.1
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	4.1
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	4.1
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	4.1
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	4.1
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	4.1
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	4.1
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	4.1
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	4.1
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	4.1
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	4.0
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	4.0
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	4.0
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	4.0
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	4.0
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	4.0
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	4.0
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	4.0
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	4.0
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	3.9
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	3.9
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	3.9
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	3.9
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	3.9
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	3.9
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	3.9
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	3.9
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	3.8
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	3.8
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	3.8
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	3.8
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	3.8
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	3.8
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	3.8
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	3.8
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	3.8
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	3.8
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	3.8
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	3.8
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	3.8
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	3.8
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	3.7
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	3.7
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	3.7
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	3.7
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	3.7
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	3.7
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	3.7
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	3.7
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	3.7
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	3.7
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	3.7
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	3.6
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	3.6
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	3.6
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	3.6
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	3.6
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	3.6
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	3.6
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	3.6
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	3.6
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	3.5
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	3.5
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	3.5
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	3.5
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	3.5
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	3.5
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	3.5
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	3.5
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	3.5
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	3.5
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	3.5
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	3.5
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	3.5
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	3.4
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	3.4
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	3.4
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	3.4
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	3.4
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	3.4
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	3.4
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	3.4
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	3.3
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	3.3
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	3.3
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	3.3
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	3.3
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	3.3
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	3.2
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	3.2
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	3.2
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	3.2
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	3.2
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	3.2
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	3.2
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	3.2
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	3.1
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	3.1
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	3.1
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	3.1
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	3.1
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	3.0
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	3.0
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	3.0
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	3.0
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	3.0
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	3.0
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	3.0
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	2.9
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	2.9
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	2.9
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	2.9
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	2.9
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	2.8
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	2.8
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	2.8
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	2.8
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	2.8
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	2.8
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	2.7
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	2.7
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	2.7
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	2.7
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	2.7
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	2.7
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	2.7
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	2.7
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	2.7
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	2.6
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	2.6
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	2.6
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	2.6
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	2.5
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	2.5
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	2.5
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	2.5
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	2.5
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	2.4
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	2.4
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	2.4
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	2.4
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	2.4
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	2.4
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	2.4
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	2.4
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	2.4
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	2.4
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	2.3
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	2.3
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	2.3
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	2.3
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	2.3
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	2.3
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	2.3
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	2.2
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	2.2
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	2.2
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	2.2
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	2.1
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	2.1
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	2.1
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	2.0
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	2.0
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	2.0
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	2.0
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	1.9
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	1.9
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	1.9
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	1.9
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	1.9
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	1.8
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	1.8
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	1.8
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	1.8
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	1.8
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	1.8
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	1.6
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	1.5
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	1.5
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	1.4
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	1.2
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	0.8
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
925	Tumor	1.4
1032	Normal	1.1
967	Tumor	1.1
1026	Normal	1.0
965	Tumor	1.0
362	Normal	1.0
663	Tumor	1.0
332	Normal	0.9
1042	Normal	0.9
571	Tumor	0.8
864	Normal	0.8
866	Normal	0.8
1022	Normal	0.8
514	Normal	0.8
546	Normal	0.8
1028	Normal	0.8
982	Normal	0.7
1045	Tumor	0.7
815	Tumor	0.7
484	Normal	0.7
746	Normal	0.7
443	Tumor	0.7
227	Tumor	0.7
922	Normal	0.7
446	Normal	0.6
534	Normal	0.6
328	Normal	0.6
964	Normal	0.6
436	Normal	0.6
258	Normal	0.6
695	Tumor	0.6
432	Normal	0.6
314	Normal	0.6
473	Tumor	0.6
412	Normal	0.6
474	Normal	0.6
364	Normal	0.5
472	Normal	0.5
722	Normal	0.5
528	Normal	0.5
1014	Normal	0.5
526	Normal	0.5
368	Normal	0.5
278	Normal	0.5
112	Tumor	0.5
298	Normal	0.5
976	Normal	0.5
862	Normal	0.5
478	Normal	0.5
1016	Normal	0.5
756	Normal	0.5
926	Normal	0.5
563	Tumor	0.5
714	Normal	0.5
482	Normal	0.5
818	Normal	0.5
285	Tumor	0.5
1041	Tumor	0.5
481	Tumor	0.5
858	Normal	0.4
984	Normal	0.4
564	Normal	0.4
958	Normal	0.4
366	Normal	0.4
666	Normal	0.4
648	Normal	0.4
852	Normal	0.4
416	Normal	0.4
356	Normal	0.4
267	Tumor	0.4
128	Normal	0.4
462	Normal	0.4
517	Tumor	0.4
268	Normal	0.4
672	Normal	0.4
361	Tumor	0.4
1046	Normal	0.4
312	Normal	0.4
123	Tumor	0.4
272	Normal	0.3
978	Normal	0.3
664	Normal	0.3
554	Normal	0.3
487	Tumor	0.3
384	Normal	0.3
918	Normal	0.3
146	Normal	0.3
415	Tumor	0.3
127	Tumor	0.3
537	Tumor	0.3
786	Normal	0.3
426	Normal	0.3
1043	Tumor	0.3
513	Tumor	0.3
863	Tumor	0.3
113	Tumor	0.3
114	Normal	0.3
553	Tumor	0.3
286	Normal	0.3
132	Normal	0.3
662	Normal	0.3
951	Tumor	0.3
568	Normal	0.3
572	Normal	0.3
824	Normal	0.3
518	Normal	0.3
671	Tumor	0.2
535	Tumor	0.2
954	Normal	0.2
142	Normal	0.2
126	Normal	0.2
744	Normal	0.2
516	Normal	0.2
262	Normal	0.2
558	Normal	0.2
723	Tumor	0.2
145	Tumor	0.2
424	Normal	0.2
716	Normal	0.2
488	Normal	0.2
865	Tumor	0.2
365	Tumor	0.2
524	Normal	0.2
857	Tumor	0.2
111	Normal	0.2
363	Tumor	0.2
742	Normal	0.2
422	Normal	0.2
284	Normal	0.2
136	Normal	0.2
232	Normal	0.2
414	Normal	0.2
444	Normal	0.2
696	Normal	0.2
868	Normal	0.2
376	Normal	0.2
924	Normal	0.2
966	Normal	0.1
916	Normal	0.1
477	Tumor	0.1
231	Tumor	0.1
224	Normal	0.1
574	Normal	0.1
461	Tumor	0.1
538	Normal	0.1
738	Normal	0.1
327	Tumor	0.1
124	Normal	0.1
968	Normal	0.1
1044	Normal	0.1
212	Normal	0.1
874	Normal	0.1
665	Tumor	0.1
428	Normal	0.1
125	Tumor	0.1
816	Normal	0.1
271	Tumor	0.1
494	Normal	0.1
141	Tumor	0.1
311	Tumor	0.1
448	Normal	0.1
421	Tumor	0.1
957	Tumor	0.1
228	Normal	0.1
383	Tumor	0.1
728	Normal	0.1
851	Tumor	0.1
698	Normal	0.1
567	Tumor	0.1
953	Tumor	0.1
873	Tumor	0.1
938	Normal	0.1
527	Tumor	0.0
331	Tumor	0.0
497	Tumor	0.0
138	Normal	0.0
434	Normal	0.0
944	Normal	0.0
713	Tumor	0.0
411	Tumor	0.0
131	Tumor	0.0
367	Tumor	0.0
433	Tumor	0.0
313	Tumor	0.0
445	Tumor	0.0
277	Tumor	0.0
423	Tumor	0.0
491	Tumor	0.0
823	Tumor	0.0
956	Normal	0.0
785	Tumor	0.0
686	Normal	-0.1
492	Normal	-0.1
777	Tumor	-0.1
661	Tumor	-0.1
867	Tumor	-0.1
778	Normal	-0.1
743	Tumor	-0.1
1015	Tumor	-0.1
921	Tumor	-0.1
431	Tumor	-0.1
975	Tumor	-0.1
741	Tumor	-0.1
515	Tumor	-0.1
697	Tumor	-0.1
817	Tumor	-0.1
557	Tumor	-0.1
923	Tumor	-0.1
745	Tumor	-0.1
727	Tumor	-0.2
724	Normal	-0.2
257	Tumor	-0.2
981	Tumor	-0.2
525	Tumor	-0.2
917	Tumor	-0.2
737	Tumor	-0.2
135	Tumor	-0.2
963	Tumor	-0.2
814	Normal	-0.2
375	Tumor	-0.2
1031	Tumor	-0.2
533	Tumor	-0.3
915	Tumor	-0.3
861	Tumor	-0.3
943	Tumor	-0.3
952	Normal	-0.3
483	Tumor	-0.3
685	Tumor	-0.3
297	Tumor	-0.3
755	Tumor	-0.3
355	Tumor	-0.3
498	Normal	-0.3
647	Tumor	-0.3
261	Tumor	-0.4
447	Tumor	-0.4
536	Normal	-0.4
137	Tumor	-0.4
545	Tumor	-0.4
1013	Tumor	-0.4
813	Tumor	-0.4
955	Tumor	-0.4
937	Tumor	-0.5
1025	Tumor	-0.5
1027	Tumor	-0.5
493	Tumor	-0.5
573	Tumor	-0.5
435	Tumor	-0.5
721	Tumor	-0.5
715	Tumor	-0.6
283	Tumor	-0.7
223	Tumor	-0.7
471	Tumor	-0.7
523	Tumor	-0.8
211	Tumor	-0.8
427	Tumor	-0.8
983	Tumor	-0.8
977	Tumor	-0.9
1021	Tumor	-0.9
413	Tumor	-0.9
425	Tumor	-1.0
351	Tumor	N/A
352	Normal	N/A
353	Tumor	N/A
354	Normal	N/A
357	Tumor	N/A
358	Normal	N/A
911	Tumor	N/A
912	Normal	N/A
913	Tumor	N/A
914	Normal	N/A
385	Tumor	N/A
386	Normal	N/A
387	Tumor	N/A
388	Normal	N/A
147	Tumor	N/A
148	Normal	N/A
391	Tumor	N/A
392	Normal	N/A
393	Tumor	N/A
394	Normal	N/A
395	Tumor	N/A
396	Normal	N/A
161	Tumor	N/A
162	Normal	N/A
171	Tumor	N/A
172	Normal	N/A
615	Tumor	N/A
616	Normal	N/A
617	Tumor	N/A
618	Normal	N/A
185	Tumor	N/A
186	Normal	N/A
187	Tumor	N/A
188	Normal	N/A
627	Tumor	N/A
628	Normal	N/A
191	Tumor	N/A
192	Normal	N/A
195	Tumor	N/A
196	Normal	N/A
635	Tumor	N/A
877	Tumor	N/A
636	Normal	N/A
878	Normal	N/A
881	Tumor	N/A
882	Normal	N/A
641	Tumor	N/A
883	Tumor	N/A
642	Normal	N/A
884	Normal	N/A
451	Tumor	N/A
452	Normal	N/A
213	Tumor	N/A
455	Tumor	N/A
214	Normal	N/A
456	Normal	N/A
217	Tumor	N/A
218	Normal	N/A
341	Tumor	N/A
221	Tumor	N/A
342	Normal	N/A
463	Tumor	N/A
222	Normal	N/A
343	Tumor	N/A
464	Normal	N/A
344	Normal	N/A
465	Tumor	N/A
466	Normal	N/A
467	Tumor	N/A
468	Normal	N/A
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA025764
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS