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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHB2 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
138.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
449.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
376.2
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
347.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
342.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
323.4
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
319.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
312.9
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
308.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
307.1
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
306.7
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
294.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
281.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
270.4
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
261.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
260.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
255.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
255.6
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
249.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
240.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
235.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
233.1
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
233.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
232.5
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
225.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
223.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
222.3
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
219.9
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
219.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
217.7
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
215.8
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
211.2
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
209.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
208.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
207.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
206.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
206.5
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
206.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
202.1
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
199.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
199.1
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
198.9
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
198.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
197.6
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
191.7
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
191.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
191.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
191.1
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
190.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
189.8
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
189.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
188.2
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
186.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
186.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
185.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
184.2
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
183.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
183.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
181.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
181.6
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
181.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
180.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
180.1
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
179.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
179.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
178.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
177.8
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
177.4
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
177.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
176.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
176.3
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
176.3
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
175.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
173.2
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
172.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
172.4
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
171.0
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
171.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
170.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
170.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
169.8
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
169.6
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
169.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
166.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
166.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
165.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
165.6
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
165.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
165.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
165.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
163.8
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
163.8
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
163.8
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
163.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
163.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
162.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
162.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
162.0
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
160.8
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
160.1
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
159.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
158.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
158.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
158.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
156.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
156.1
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
155.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
155.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
153.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
153.2
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
153.2
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
153.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
152.9
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
152.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
152.5
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
152.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
152.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
151.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
151.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
151.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
151.3
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
151.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
150.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
150.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
149.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
149.5
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
149.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
149.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
149.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
148.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
148.1
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
148.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
147.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
147.7
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
147.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
146.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
146.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
146.7
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
146.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
146.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
145.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
145.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
144.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
144.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
144.6
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
144.4
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
144.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
144.1
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
143.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
143.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
143.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
142.9
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
142.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
142.3
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
142.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
142.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
141.9
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
141.8
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
141.7
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
141.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
141.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
141.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
140.5
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
139.7
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
139.1
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
138.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
138.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
138.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
137.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
137.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
137.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
137.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
136.6
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
136.4
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
136.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
135.5
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
135.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
134.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
134.4
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
133.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
133.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
133.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
132.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
132.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
131.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
131.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
131.2
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
131.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
130.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
130.6
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
130.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
130.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
129.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
129.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
128.8
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
128.7
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
128.5
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
128.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
127.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
127.5
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
127.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
127.2
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
127.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
126.6
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
126.6
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
126.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
126.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
125.8
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
125.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
125.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
124.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
124.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
124.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
124.0
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
124.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
123.8
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
123.4
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
122.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
121.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
121.3
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
120.9
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
120.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
120.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
120.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
120.5
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
119.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
119.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
119.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
119.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
119.1
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
118.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
118.4
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
118.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
117.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
117.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
117.6
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
116.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
116.9
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
116.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
116.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
115.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
115.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
115.3
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
114.9
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
113.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
113.3
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
112.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
111.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
111.3
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
110.6
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
110.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
110.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
110.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
109.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
109.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
109.2
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
108.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
108.5
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
108.4
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
108.4
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
108.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
108.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
107.6
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
107.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
107.2
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
107.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
106.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
106.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
106.0
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
105.8
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
105.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
105.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
105.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
104.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
104.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
103.6
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
103.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
102.9
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
102.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
100.3
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
99.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
98.8
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
98.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
97.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
97.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
96.8
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
96.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
95.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
95.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
95.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
94.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
94.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
94.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
94.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
93.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
92.8
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
92.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
92.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
91.8
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
91.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
90.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
90.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
89.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
89.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
89.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
88.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
88.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
86.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
86.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
85.6
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
83.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
83.6
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
83.2
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
82.6
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
80.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
79.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
79.6
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
79.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
78.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
78.1
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
77.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
77.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
76.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
76.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
75.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
75.8
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
75.1
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
74.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
74.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
73.6
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
73.5
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
73.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
71.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
71.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
66.9
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
66.5
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
64.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
63.8
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
63.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
63.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
63.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
63.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
63.0
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
62.3
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
59.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
58.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
57.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
57.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
53.5
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
52.7
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
52.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
51.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
43.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
41.4
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
39.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
35.9
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
33.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
32.8
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
30.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
23.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
23.9
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PHB2 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
117.3
Number of samples
231
Samples
Sample
Description
TPM
DO45211
0 years, male, NA, stage:3, alive, 240 days
288.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
270.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
269.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
266.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
248.9
DO48695
0 years, male, NA, stage:2, alive, 720 days
243.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
240.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
234.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
218.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
214.7
DO23526
0 years, male, NA, stage:3, alive, 1050 days
209.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
202.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
201.8
DO50791
0 years, female, NA, stage:1, dead, 480 days
201.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
200.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
196.8
DO23540
0 years, male, NA, stage:1, alive, 750 days
194.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
190.4
DO23515
0 years, male, NA, stage:2, alive, 1230 days
189.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
189.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
187.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
185.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
183.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
182.6
DO50802
0 years, male, NA, stage:2, alive, 930 days
181.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
178.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
176.3
DO50806
0 years, male, NA, stage:4, alive, 540 days
172.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
168.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
166.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
164.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
163.3
DO23519
0 years, male, NA, stage:3, alive, 630 days
163.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
162.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
161.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
160.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
159.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
158.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
155.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
154.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
151.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
151.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
150.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
150.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
148.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
143.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
140.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
139.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
139.4
DO23528
0 years, female, NA, stage:2, alive, 1020 days
139.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
138.8
DO50819
0 years, female, NA, stage:2, alive, 510 days
136.7
DO48757
0 years, female, NA, stage:3, alive, 480 days
135.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
134.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
134.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
133.5
DO45235
0 years, female, NA, stage:1, alive, 900 days
132.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
132.6
DO45107
0 years, female, NA, stage:2, alive, 1710 days
132.3
DO48715
0 years, female, NA, stage:2, dead, 690 days
131.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
130.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
130.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
130.4
DO48723
0 years, male, NA, stage:1, alive, 600 days
129.5
DO50855
0 years, male, NA, stage:2, alive, 570 days
128.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
128.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
127.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
127.5
DO48732
0 years, male, NA, stage:3, alive, 630 days
127.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
127.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
127.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
126.8
DO45237
0 years, male, NA, stage:2, alive, 900 days
126.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
126.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
126.3
DO50805
0 years, male, NA, stage:2, alive, 690 days
124.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
123.7
DO45277
0 years, male, NA, stage:3, alive, 600 days
123.4
DO50822
0 years, male, NA, stage:2, alive, 510 days
123.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
123.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
123.1
DO45193
0 years, female, NA, stage:4, dead, 120 days
122.7
DO23549
0 years, male, NA, stage:3, alive, 990 days
122.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
121.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
120.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
119.8
DO45249
0 years, male, NA, stage:1, alive, 630 days
118.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
118.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
117.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
117.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
117.4
DO45241
0 years, male, NA, stage:1, alive, 1080 days
117.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
117.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
116.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
116.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
116.1
DO45215
0 years, male, NA, stage:2, alive, 1170 days
115.7
DO50829
0 years, male, NA, stage:3, alive, 570 days
114.6
DO45101
0 years, male, NA, stage:2, alive, 1680 days
114.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
113.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
113.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
112.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
112.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
112.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
111.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
111.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
111.7
DO45185
0 years, male, NA, stage:2, alive, 600 days
111.6
DO48746
0 years, male, NA, stage:3, alive, 570 days
110.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
109.9
DO50844
0 years, male, NA, stage:4, alive, 300 days
109.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
109.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
106.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
105.7
DO48716
0 years, male, NA, stage:2, alive, 720 days
105.0
DO45094
0 years, male, NA, stage:3, alive, 1650 days
104.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
104.7
DO45203
0 years, female, NA, stage:2, alive, 1170 days
104.6
DO48725
0 years, male, NA, stage:1, alive, 780 days
104.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
104.0
DO50800
0 years, male, NA, stage:2, alive, 510 days
103.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
103.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
102.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
102.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
102.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
102.6
DO50825
0 years, male, NA, stage:2, alive, 390 days
102.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
101.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
101.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
100.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
100.2
DO23510
0 years, female, NA, stage:2, alive, 870 days
100.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
99.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
99.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
99.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
99.0
DO227643
0 years, male, NA, stage:2, alive, 1260 days
99.0
DO23533
0 years, male, NA, stage:2, alive, 900 days
98.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
98.6
DO45111
0 years, male, NA, stage:2, alive, 1590 days
98.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
98.4
DO23518
0 years, male, NA, stage:2, alive, 1320 days
98.0
DO45181
0 years, female, NA, stage:2, alive, 1200 days
97.8
DO23527
0 years, male, NA, stage:1, alive, 1050 days
97.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
97.6
DO48760
0 years, female, NA, stage:2, alive, 690 days
96.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
96.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
96.4
DO50787
0 years, male, NA, stage:3, alive, 480 days
96.4
DO50820
0 years, female, NA, stage:3, alive, 510 days
96.3
DO23531
0 years, female, NA, stage:3, alive, 900 days
95.7
DO45169
0 years, male, NA, stage:3, alive, 1350 days
95.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
95.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
94.5
DO45191
0 years, female, NA, stage:2, alive, 1200 days
94.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
93.9
DO45201
0 years, male, NA, stage:1, alive, 900 days
93.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
93.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
93.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
93.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
92.9
DO48677
0 years, male, NA, stage:3, alive, 1140 days
92.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
91.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
91.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
91.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
91.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
90.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
90.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
90.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
89.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
89.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
89.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
89.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
89.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
88.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
88.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
87.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
87.8
DO23538
0 years, male, NA, stage:2, alive, 450 days
87.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
87.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
87.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
87.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
86.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
86.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
86.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
86.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
86.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
85.5
DO23543
0 years, male, NA, stage:2, alive, 1020 days
81.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
81.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
80.6
DO23548
0 years, female, NA, stage:1, alive, 840 days
80.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
79.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
78.8
DO227801
0 years, female, NA, stage:1, alive, 660 days
78.3
DO23523
0 years, male, NA, stage:3, alive, 1080 days
78.1
DO23517
0 years, male, NA, stage:2, alive, 1200 days
77.9
DO50808
0 years, male, NA, stage:2, alive, 570 days
77.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
77.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
77.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
77.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
76.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
76.8
DO48728
0 years, female, NA, stage:2, alive, 150 days
76.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
76.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
75.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
74.4
DO50857
0 years, male, NA, stage:2, alive, 210 days
74.0
DO50818
0 years, male, NA, stage:2, alive, 510 days
73.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
73.5
DO45275
0 years, male, NA, stage:3, dead, 10 days
73.2
DO50845
0 years, male, NA, stage:3, alive, 210 days
73.0
DO50803
0 years, female, NA, stage:1, alive, 540 days
72.2
DO50774
0 years, female, NA, stage:2, alive, 720 days
70.4
DO50804
0 years, male, NA, stage:2, alive, 720 days
69.9
DO23547
0 years, male, NA, stage:1, alive, 1020 days
68.2
DO48721
0 years, female, NA, stage:1, alive, 900 days
66.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
66.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
65.4
DO23532
0 years, female, NA, stage:1, alive, 960 days
65.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
62.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
60.7
DO45105
0 years, male, NA, stage:1, alive, 1680 days
56.4
DO45263
0 years, male, NA, stage:3, dead, 270 days
54.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
54.1
DO45113
0 years, male, NA, stage:3, alive, 1560 days
51.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
49.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
49.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
43.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
42.0
DO23544
0 years, male, NA, stage:2, alive, 960 days
36.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
627
Tumor
0.9
571
Tumor
0.9
635
Tumor
0.9
513
Tumor
0.8
465
Tumor
0.8
695
Tumor
0.7
615
Tumor
0.7
423
Tumor
0.6
361
Tumor
0.6
1045
Tumor
0.6
925
Tumor
0.6
937
Tumor
0.5
172
Normal
0.5
755
Tumor
0.5
452
Normal
0.5
873
Tumor
0.5
636
Normal
0.5
227
Tumor
0.5
745
Tumor
0.5
365
Tumor
0.4
392
Normal
0.4
128
Normal
0.4
411
Tumor
0.4
824
Normal
0.4
477
Tumor
0.4
342
Normal
0.4
162
Normal
0.4
882
Normal
0.4
328
Normal
0.4
922
Normal
0.4
466
Normal
0.4
358
Normal
0.4
864
Normal
0.4
394
Normal
0.4
222
Normal
0.4
867
Tumor
0.4
912
Normal
0.4
746
Normal
0.4
756
Normal
0.4
488
Normal
0.4
1032
Normal
0.4
648
Normal
0.3
868
Normal
0.3
534
Normal
0.3
723
Tumor
0.3
938
Normal
0.3
332
Normal
0.3
911
Tumor
0.3
515
Tumor
0.3
884
Normal
0.3
186
Normal
0.3
127
Tumor
0.3
484
Normal
0.3
738
Normal
0.3
786
Normal
0.3
572
Normal
0.3
436
Normal
0.3
354
Normal
0.3
112
Tumor
0.3
341
Tumor
0.3
422
Normal
0.3
618
Normal
0.3
944
Normal
0.3
862
Normal
0.3
393
Tumor
0.3
431
Tumor
0.3
388
Normal
0.3
1046
Normal
0.3
568
Normal
0.3
344
Normal
0.3
298
Normal
0.3
954
Normal
0.3
443
Tumor
0.3
563
Tumor
0.3
462
Normal
0.3
564
Normal
0.3
426
Normal
0.3
376
Normal
0.3
1026
Normal
0.3
616
Normal
0.3
314
Normal
0.3
984
Normal
0.3
981
Tumor
0.3
414
Normal
0.3
472
Normal
0.3
741
Tumor
0.3
964
Normal
0.3
483
Tumor
0.3
1022
Normal
0.3
858
Normal
0.3
448
Normal
0.3
424
Normal
0.3
742
Normal
0.3
352
Normal
0.2
367
Tumor
0.2
818
Normal
0.2
698
Normal
0.2
464
Normal
0.2
428
Normal
0.2
356
Normal
0.2
148
Normal
0.2
744
Normal
0.2
686
Normal
0.2
664
Normal
0.2
267
Tumor
0.2
714
Normal
0.2
113
Tumor
0.2
482
Normal
0.2
446
Normal
0.2
915
Tumor
0.2
1043
Tumor
0.2
665
Tumor
0.2
124
Normal
0.2
722
Normal
0.2
412
Normal
0.2
728
Normal
0.2
1014
Normal
0.2
878
Normal
0.2
494
Normal
0.2
713
Tumor
0.2
528
Normal
0.2
351
Tumor
0.2
866
Normal
0.2
196
Normal
0.2
416
Normal
0.2
432
Normal
0.2
642
Normal
0.2
132
Normal
0.2
357
Tumor
0.2
145
Tumor
0.2
214
Normal
0.2
278
Normal
0.2
982
Normal
0.2
1027
Tumor
0.2
232
Normal
0.2
918
Normal
0.2
1015
Tumor
0.2
666
Normal
0.2
926
Normal
0.2
924
Normal
0.2
958
Normal
0.2
978
Normal
0.2
364
Normal
0.2
976
Normal
0.2
716
Normal
0.2
258
Normal
0.2
396
Normal
0.2
228
Normal
0.2
816
Normal
0.2
114
Normal
0.2
957
Tumor
0.2
478
Normal
0.2
662
Normal
0.2
142
Normal
0.2
546
Normal
0.2
628
Normal
0.2
138
Normal
0.1
1016
Normal
0.1
968
Normal
0.1
218
Normal
0.1
366
Normal
0.1
558
Normal
0.1
955
Tumor
0.1
362
Normal
0.1
137
Tumor
0.1
435
Tumor
0.1
1041
Tumor
0.1
1042
Normal
0.1
368
Normal
0.1
284
Normal
0.1
286
Normal
0.1
696
Normal
0.1
527
Tumor
0.1
363
Tumor
0.1
514
Normal
0.1
526
Normal
0.1
785
Tumor
0.1
518
Normal
0.1
685
Tumor
0.1
1028
Normal
0.1
123
Tumor
0.1
136
Normal
0.1
574
Normal
0.1
387
Tumor
0.1
272
Normal
0.1
353
Tumor
0.1
952
Normal
0.1
914
Normal
0.1
262
Normal
0.1
474
Normal
0.1
146
Normal
0.1
386
Normal
0.1
212
Normal
0.1
111
Normal
0.1
672
Normal
0.1
778
Normal
0.1
1044
Normal
0.1
451
Tumor
0.1
538
Normal
0.1
224
Normal
0.1
456
Normal
0.1
261
Tumor
0.1
874
Normal
0.1
916
Normal
0.1
524
Normal
0.1
554
Normal
0.1
573
Tumor
0.1
126
Normal
0.1
777
Tumor
0.1
956
Normal
0.1
852
Normal
0.1
383
Tumor
0.1
967
Tumor
0.1
516
Normal
0.0
567
Tumor
0.0
966
Normal
0.0
312
Normal
0.0
461
Tumor
0.0
468
Normal
0.0
557
Tumor
0.0
231
Tumor
0.0
384
Normal
0.0
865
Tumor
0.0
433
Tumor
0.0
268
Normal
0.0
327
Tumor
0.0
857
Tumor
0.0
1025
Tumor
0.0
663
Tumor
0.0
492
Normal
0.0
965
Tumor
0.0
444
Normal
0.0
434
Normal
0.0
188
Normal
0.0
861
Tumor
0.0
135
Tumor
0.0
415
Tumor
0.0
421
Tumor
0.0
553
Tumor
0.0
217
Tumor
-0.1
737
Tumor
-0.1
491
Tumor
-0.1
537
Tumor
-0.1
191
Tumor
-0.1
213
Tumor
-0.1
721
Tumor
-0.1
331
Tumor
-0.1
523
Tumor
-0.1
983
Tumor
-0.1
297
Tumor
-0.1
641
Tumor
-0.1
195
Tumor
-0.1
171
Tumor
-0.1
727
Tumor
-0.1
815
Tumor
-0.1
481
Tumor
-0.2
697
Tumor
-0.2
498
Normal
-0.2
355
Tumor
-0.2
455
Tumor
-0.2
313
Tumor
-0.2
493
Tumor
-0.2
715
Tumor
-0.2
187
Tumor
-0.2
1013
Tumor
-0.2
425
Tumor
-0.2
391
Tumor
-0.2
953
Tumor
-0.2
525
Tumor
-0.2
913
Tumor
-0.2
823
Tumor
-0.2
221
Tumor
-0.2
536
Normal
-0.2
192
Normal
-0.2
851
Tumor
-0.2
883
Tumor
-0.2
923
Tumor
-0.2
385
Tumor
-0.2
671
Tumor
-0.2
951
Tumor
-0.2
963
Tumor
-0.3
285
Tumor
-0.3
445
Tumor
-0.3
647
Tumor
-0.3
661
Tumor
-0.3
617
Tumor
-0.3
471
Tumor
-0.3
487
Tumor
-0.3
473
Tumor
-0.3
413
Tumor
-0.3
185
Tumor
-0.3
147
Tumor
-0.3
223
Tumor
-0.3
813
Tumor
-0.4
877
Tumor
-0.4
131
Tumor
-0.4
161
Tumor
-0.4
427
Tumor
-0.4
814
Normal
-0.4
863
Tumor
-0.4
517
Tumor
-0.4
277
Tumor
-0.4
141
Tumor
-0.4
447
Tumor
-0.4
1021
Tumor
-0.5
881
Tumor
-0.5
467
Tumor
-0.5
975
Tumor
-0.5
271
Tumor
-0.5
977
Tumor
-0.5
743
Tumor
-0.5
545
Tumor
-0.5
921
Tumor
-0.5
724
Normal
-0.6
311
Tumor
-0.6
375
Tumor
-0.6
535
Tumor
-0.6
395
Tumor
-0.6
463
Tumor
-0.6
917
Tumor
-0.6
943
Tumor
-0.6
125
Tumor
-0.7
211
Tumor
-0.7
343
Tumor
-0.7
257
Tumor
-0.7
1031
Tumor
-0.7
533
Tumor
-0.8
497
Tumor
-0.9
817
Tumor
-0.9
283
Tumor
-1.0
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.