We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BBIP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.6
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
34.1
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
29.5
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
29.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
28.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
27.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
25.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
24.3
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
23.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
22.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
21.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
19.7
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
19.7
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
19.4
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
18.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
17.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
17.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
16.7
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
15.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
14.5
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.0
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
14.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
13.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
13.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.7
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
12.6
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
12.1
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
11.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
11.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
11.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
11.1
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
10.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.4
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
10.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
10.1
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
9.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
9.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
9.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
8.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
8.2
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
8.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.1
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
8.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
7.9
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
7.8
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
7.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
7.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
7.2
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
7.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.9
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.8
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BBIP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
16.9
Number of samples
521
Samples
Sample
Description
TPM
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
47.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
37.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
33.1
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
31.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
31.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
30.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
30.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
30.2
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
29.8
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
29.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
29.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.0
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
29.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
28.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
27.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
27.5
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
27.2
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
27.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
26.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
26.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
26.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
26.3
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
26.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
26.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
26.0
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
26.0
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
25.7
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
25.5
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
25.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
25.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
25.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
25.2
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
25.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
25.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
24.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
24.9
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
24.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
24.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
24.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
24.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
24.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
24.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
24.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
24.2
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
24.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
24.0
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
23.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
23.9
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
23.8
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
23.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
23.5
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
23.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
23.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
23.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
23.3
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
23.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
23.1
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
23.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
23.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.9
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
22.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
22.7
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
22.7
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
22.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
22.6
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
22.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
22.6
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
22.6
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
22.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
22.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
22.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
22.3
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
22.3
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
22.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
22.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
22.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
22.2
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
22.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
22.2
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
22.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
22.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
21.9
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
21.9
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
21.9
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
21.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
21.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
21.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
21.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.6
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
21.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
21.6
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
21.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
21.4
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
21.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
21.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
21.3
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
21.3
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
21.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
21.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
21.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
21.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.0
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
21.0
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
20.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
20.9
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
20.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
20.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
20.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
20.7
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
20.7
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
20.7
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
20.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
20.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
20.6
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
20.5
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
20.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
20.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
20.3
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
20.3
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
20.3
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
20.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.2
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
20.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
20.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
20.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
20.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
20.0
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
20.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
20.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
19.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
19.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
19.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
19.9
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
19.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
19.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
19.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
19.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
19.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
19.6
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
19.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
19.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
19.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.5
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
19.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
19.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
19.4
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
19.4
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
19.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
19.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
19.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
19.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
19.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
19.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
19.3
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
19.3
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
19.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
19.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
19.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
19.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
19.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
19.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
19.2
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
19.2
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
19.1
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
19.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
19.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
19.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
18.9
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
18.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
18.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
18.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
18.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
18.8
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
18.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
18.8
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
18.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
18.7
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
18.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.6
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.5
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
18.5
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
18.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
18.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
18.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
18.2
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.2
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
18.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
18.1
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
18.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
18.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
18.1
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
18.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
18.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
18.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
18.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
18.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
18.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
17.9
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
17.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
17.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
17.7
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
17.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
17.7
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
17.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
17.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
17.5
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
17.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
17.5
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
17.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.5
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
17.4
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
17.4
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
17.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
17.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
17.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
17.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
17.3
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
17.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
17.3
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
17.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
17.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
17.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
17.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
17.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
17.0
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.0
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
17.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
17.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
16.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
16.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
16.8
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.8
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
16.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
16.8
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
16.6
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
16.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
16.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
16.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
16.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
16.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
16.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
16.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
16.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
16.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
16.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
16.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.2
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
16.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
16.2
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
16.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
16.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
16.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.1
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
16.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
16.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
16.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
16.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.9
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
15.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
15.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
15.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
15.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
15.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
15.8
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
15.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
15.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
15.7
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
15.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
15.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
15.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
15.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.5
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
15.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
15.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
15.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
15.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
15.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
15.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
15.3
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
15.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
15.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.0
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
15.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
15.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
15.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
14.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
14.9
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
14.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
14.8
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
14.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
14.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.8
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
14.8
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
14.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
14.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
14.7
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
14.6
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
14.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
14.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
14.5
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
14.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
14.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
14.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
14.3
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
14.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
14.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
14.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
14.1
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
14.1
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
14.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
14.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
14.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
13.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.9
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
13.9
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
13.9
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
13.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
13.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
13.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
13.8
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
13.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
13.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.7
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
13.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
13.7
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
13.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
13.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
13.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
13.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
13.5
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
13.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
13.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
13.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
13.4
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
13.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
13.3
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
13.2
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
13.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
13.2
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
13.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
13.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
13.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
13.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
13.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.1
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
13.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
13.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
13.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
12.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.9
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
12.9
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
12.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
12.9
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
12.8
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
12.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
12.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
12.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
12.7
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
12.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
12.6
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12.6
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.5
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
12.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
12.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
12.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
12.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.4
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.4
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
12.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
12.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
12.0
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.0
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
11.9
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
11.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
11.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
11.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
11.8
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
11.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
11.7
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
11.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
11.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
11.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.5
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.4
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
11.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
11.4
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
11.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
11.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
11.1
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
11.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
11.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
11.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
11.1
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.0
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
11.0
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
10.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
10.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
10.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
10.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
10.8
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
10.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
10.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
10.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
10.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
10.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
10.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
10.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
10.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
10.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
10.1
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
10.1
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
10.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
10.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
9.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
9.8
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
9.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
9.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
9.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.6
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
9.5
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
9.3
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.2
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
9.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
8.9
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.7
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
8.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
8.5
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.5
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
8.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
8.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.3
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
8.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.8
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
7.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
7.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
7.5
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.5
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.4
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
5.9
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
5.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BBIP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
40.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
39.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
38.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
37.6
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
36.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
35.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
34.9
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
34.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
32.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
32.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
32.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
31.9
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
31.8
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
30.8
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
30.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
30.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
30.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
30.3
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
30.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
30.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
29.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
29.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
29.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
29.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
29.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
28.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.5
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
28.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
28.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
27.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
27.6
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
27.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
27.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
27.3
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
27.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
27.0
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
26.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
26.4
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
26.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
25.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
25.3
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
25.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
25.2
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
24.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
24.3
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
23.8
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
23.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
23.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
23.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
22.5
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
22.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
22.1
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
21.3
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
21.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.0
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
21.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
20.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
20.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
20.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
20.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
20.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
20.1
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
20.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
19.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
19.6
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
19.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
19.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
19.0
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
18.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
18.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
18.7
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
18.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
17.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
16.6
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.1
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
14.9
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
14.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
14.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
14.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
14.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
14.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.0
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
13.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
13.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
10.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
8.9
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
BBIP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
89.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
71.9
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
63.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
47.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
45.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
45.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
44.3
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
42.6
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
40.7
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
39.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
36.2
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
36.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
35.9
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
31.8
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
30.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
29.3
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
28.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
28.4
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
28.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
27.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
27.3
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
27.1
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
26.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
26.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
25.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
25.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
24.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
24.5
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
23.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
23.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
23.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
23.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
23.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
22.5
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
22.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
22.4
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
22.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
22.4
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
22.3
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.3
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
22.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
22.1
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
21.6
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
21.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
20.9
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
20.8
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
20.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
20.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
20.6
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
20.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
20.4
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
20.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
20.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
20.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
19.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
19.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
19.8
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
19.7
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
19.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
19.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
19.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
19.5
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
19.5
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
19.4
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
19.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
19.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
19.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
19.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
19.2
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.2
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.1
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
19.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
18.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
18.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
18.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
18.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
18.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
18.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
18.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
17.8
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
17.8
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
17.7
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
17.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
17.6
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
17.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
17.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
17.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
17.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
17.2
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
17.0
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.9
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
16.7
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
16.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
16.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
16.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
16.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
16.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
16.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
16.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
16.1
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
16.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
16.1
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
16.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
15.8
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
15.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
15.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
15.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
15.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
15.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
15.3
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
15.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
15.2
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
15.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.1
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
14.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
14.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
14.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
14.8
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
14.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
14.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
14.6
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
14.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
14.4
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
14.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
14.3
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
14.3
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
14.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
14.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
14.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
14.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
14.0
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
14.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
13.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
13.7
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
13.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
13.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
13.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
13.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
13.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
13.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.5
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
13.4
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
13.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
13.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
13.2
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
13.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
13.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
13.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
12.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
12.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
12.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
12.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
12.8
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
12.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.7
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
12.7
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
12.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
12.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
12.5
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
12.4
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
12.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
12.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
12.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.2
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
12.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
11.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
11.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.9
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
11.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
11.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
11.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
11.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
11.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
11.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
11.8
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
11.7
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
11.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
11.5
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
11.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
11.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
11.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.3
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
11.3
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
11.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
11.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
10.9
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
10.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
10.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
10.8
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
10.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
10.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
10.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
10.6
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
10.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
10.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
10.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
10.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
10.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
10.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
10.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
9.8
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
9.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
9.7
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
9.6
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
9.6
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
9.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
9.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
9.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
8.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
8.9
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.8
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
8.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
8.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
8.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
8.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
8.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
8.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.4
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
8.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
8.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
8.4
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
8.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
7.8
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
7.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
7.5
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
7.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
7.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
7.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
7.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
7.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
6.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
6.4
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
6.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.8
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
5.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
5.2
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
5.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
5.0
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
4.4
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
3.5
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
2.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0023710001
Normal
0.8
CPT0069000003
Tumor
0.7
CPT0000660001
Normal
0.7
CPT0078940001
Normal
0.6
CPT0023360001
Normal
0.6
CPT0088500001
Normal
0.6
CPT0006950001
Normal
0.5
CPT0079000001
Normal
0.5
CPT0065820001
Normal
0.5
CPT0014350001
Normal
0.5
CPT0010120001
Normal
0.5
CPT0079270003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0024680001
Normal
0.5
CPT0092800003
Normal
0.5
CPT0086370003
Normal
0.4
CPT0025610001
Normal
0.4
CPT0025170003
Tumor
0.4
CPT0013790003
Normal
0.4
CPT0007470001
Normal
0.4
CPT0011410003
Tumor
0.4
CPT0078990003
Tumor
0.4
CPT0077320001
Normal
0.4
CPT0078530001
Normal
0.4
CPT0001230001
Normal
0.4
CPT0012570003
Normal
0.4
CPT0014450004
Tumor
0.4
CPT0088640003
Normal
0.4
CPT0079230003
Tumor
0.4
CPT0079300001
Normal
0.4
CPT0075720003
Tumor
0.4
CPT0079510001
Normal
0.4
CPT0025110003
Tumor
0.4
CPT0066520001
Normal
0.4
CPT0078800003
Tumor
0.4
CPT0014130001
Normal
0.4
CPT0063640001
Normal
0.4
CPT0066470004
Tumor
0.4
CPT0014470001
Normal
0.3
CPT0092310003
Normal
0.3
CPT0001510001
Normal
0.3
CPT0065450001
Normal
0.3
CPT0069010001
Normal
0.3
CPT0078840001
Normal
0.3
CPT0012770003
Normal
0.3
CPT0079430001
Normal
0.3
CPT0086870003
Tumor
0.3
CPT0075570001
Normal
0.3
CPT0089480003
Normal
0.3
CPT0002350011
Tumor
0.3
CPT0066480003
Tumor
0.3
CPT0077500001
Normal
0.3
CPT0025920001
Normal
0.3
CPT0019160001
Normal
0.3
CPT0082010001
Normal
0.3
CPT0015810003
Tumor
0.2
CPT0010170001
Normal
0.2
CPT0025880003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0025290003
Tumor
0.2
CPT0084590001
Normal
0.2
CPT0001190001
Normal
0.2
CPT0077140001
Normal
0.2
CPT0063330001
Normal
0.2
CPT0087050003
Normal
0.2
CPT0002370001
Normal
0.2
CPT0088710001
Normal
0.2
CPT0089040001
Normal
0.2
CPT0065930003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0006730001
Normal
0.2
CPT0079380003
Tumor
0.2
CPT0025060001
Normal
0.2
CPT0001550001
Normal
0.2
CPT0088780001
Normal
0.2
CPT0001350001
Normal
0.2
CPT0001270001
Normal
0.2
CPT0012900004
Tumor
0.2
CPT0007870001
Normal
0.2
CPT0069190001
Normal
0.2
CPT0086830003
Normal
0.2
CPT0063630003
Tumor
0.2
CPT0086950003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0076350001
Normal
0.1
CPT0019990003
Tumor
0.1
CPT0026420001
Normal
0.1
CPT0086890003
Normal
0.1
CPT0000790001
Normal
0.1
CPT0077490003
Tumor
0.1
CPT0075170001
Normal
0.1
CPT0000640003
Tumor
0.1
CPT0020130001
Normal
0.1
CPT0025230003
Tumor
0.1
CPT0088900003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0088920001
Normal
0.1
CPT0007860003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0088570001
Normal
0.1
CPT0086970003
Normal
0.1
CPT0012090003
Normal
0.1
CPT0000870016
Tumor
0.1
CPT0001540009
Tumor
0.1
CPT0021240003
Tumor
0.1
CPT0000890001
Normal
0.1
CPT0065870003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0078660003
Tumor
0.0
CPT0006440003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0006630003
Tumor
0.0
CPT0065750003
Tumor
0.0
CPT0020020001
Normal
0.0
CPT0088760003
Tumor
0.0
CPT0000780007
Tumor
0.0
CPT0017450001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0078830003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0089020003
Tumor
-0.1
CPT0092740003
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0064370003
Tumor
-0.1
CPT0092190003
Normal
-0.1
CPT0088970003
Tumor
-0.1
CPT0071150004
Tumor
-0.1
CPT0012640003
Normal
-0.1
CPT0001180009
Tumor
-0.1
CPT0092290003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0063320003
Tumor
-0.2
CPT0012290003
Normal
-0.2
CPT0006530001
Normal
-0.2
CPT0009000003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0086820003
Tumor
-0.2
CPT0017850003
Tumor
-0.2
CPT0023690003
Tumor
-0.2
CPT0088630003
Tumor
-0.2
CPT0092790003
Tumor
-0.2
CPT0025580004
Tumor
-0.2
CPT0006900003
Tumor
-0.2
CPT0077110003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0085670003
Tumor
-0.2
CPT0001260009
Tumor
-0.2
CPT0081990003
Tumor
-0.2
CPT0075130003
Tumor
-0.2
CPT0075560003
Tumor
-0.3
CPT0009020003
Normal
-0.3
CPT0087040003
Tumor
-0.3
CPT0007320003
Tumor
-0.3
CPT0081600003
Tumor
-0.3
CPT0009060003
Tumor
-0.3
CPT0065430003
Tumor
-0.3
CPT0079410003
Tumor
-0.3
CPT0065810003
Tumor
-0.3
CPT0078930003
Tumor
-0.4
CPT0011240003
Tumor
-0.4
CPT0026410003
Tumor
-0.4
CPT0076330003
Tumor
-0.4
CPT0010110003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0002270011
Tumor
-0.4
CPT0020120003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0019130003
Tumor
-0.5
CPT0015730003
Tumor
-0.5
CPT0077310003
Tumor
-0.6
CPT0014160003
Tumor
-0.6
CPT0086030003
Tumor
-0.6
CPT0086360003
Tumor
-0.6
CPT0069160003
Tumor
-0.6
CPT0001340003
Tumor
-0.6
CPT0012670003
Tumor
-0.6
CPT0081880003
Tumor
-0.6
CPT0012370003
Tumor
-0.7
CPT0012180003
Tumor
-0.8
CPT0088550004
Tumor
-0.8
CPT0023350003
Tumor
-0.8
CPT0079180003
Tumor
-0.8
CPT0078510003
Tumor
-0.9
CPT0024670003
Tumor
-1.0
CPT0012080003
Tumor
-1.0
CPT0088480003
Tumor
-1.0
CPT0012280003
Tumor
-1.0
CPT0012550003
Tumor
-1.2
Show allShow less
RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
