HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
RNA expressioni
Consensus:12.5 nTPM
HPA Brain:14.8 nTPM
GTEx:12.5 nTPM
FANTOM5:8.7 Scaled Tags Per Million
Pig:11.3 nTPM
Mouse:17.1 nTPM
Allen mouse:5.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA014711Antibody HPA070816
Glial cells LowNot detected
Neuronal cells LowNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 14.8
Sample id Sample description nTPM
Hippocampus
nTPM: 14.8
2529 Female, age 94, left hemisphere 18.3
1911 Female, age 85, right hemisphere 17.1
1855 Male, age 76, left hemisphere 14.5
2621 Female, age 67, right hemisphere 14.3
2148 Female, age 91, left hemisphere 13.0
1898 Male, age 80, left hemisphere 11.5
Dentate gyrus
nTPM: 14.3
2010 Male, age 76, both hemispheres 17.0
2530 Female, age 94, left hemisphere 15.9
2528 Male, age 74, both hemispheres 14.8
2246 Female, age 85, both hemispheres 13.6
2531 Female, age 67, both hemispheres 13.5
1927 Female, age 91, both hemispheres 10.9
Entorhinal gyrus
nTPM: 12.6
1787 Male, age 76, left hemisphere 14.9
2686 Male, age 75, right hemisphere 14.2
2117 Female, age 91, right hemisphere 13.7
1938 Female, age 85, left hemisphere 12.2
2764 Male, age 80, right hemisphere 10.5
2613 Female, age 94, left hemisphere 10.0
Hippocampus, CA1
nTPM: 13.5
2082 Female, age 91, right hemisphere 15.5
2527 Male, age 74, both hemispheres 15.1
2045 Male, age 76, both hemispheres 13.4
1873 Female, age 85, both hemispheres 13.0
2749 Male, age 80, left hemisphere 10.5
Hippocampus, CA2
nTPM: 14.0
2249 Male, age 74, both hemispheres 17.0
2437 Female, age 94, left hemisphere 16.1
2113 Female, age 91, right hemisphere 15.8
1940 Female, age 85, left hemisphere 13.7
1963 Male, age 80, left hemisphere 11.4
1892 Male, age 76, both hemispheres 10.1
Hippocampus, CA3
nTPM: 13.6
2436 Male, age 74, both hemispheres 15.6
2861 Female, age 67, both hemispheres 15.5
1891 Female, age 85, both hemispheres 14.2
1867 Male, age 76, both hemispheres 13.2
2137 Male, age 80, left hemisphere 12.1
2620 Female, age 94, left hemisphere 11.1
Parahippocampal cortex
nTPM: 13.1
2018 Male, age 76, both hemispheres 20.7
2622 Female, age 67, right hemisphere 14.7
2692 Male, age 74, both hemispheres 14.3
2250 Female, age 67, right hemisphere 12.8
2532 Female, age 72, left hemisphere 12.3
2245 Female, age 91, both hemispheres 12.2
1990 Female, age 91, right hemisphere 11.5
1933 Female, age 85, both hemispheres 11.2
1850 Male, age 80, both hemispheres 10.9
2693 Female, age 94, both hemispheres 10.4
Perirhinal gyrus
nTPM: 10.9
1841 Female, age 85, right hemisphere 13.0
2521 Female, age 94, right hemisphere 11.6
1794 Male, age 80, right hemisphere 10.3
1847 Female, age 91, left hemisphere 9.9
2848 Male, age 76, right hemisphere 9.7
Subiculum
nTPM: 14.6
2042 Male, age 76, both hemispheres 17.8
2729 Female, age 91, right hemisphere 16.7
2619 Male, age 74, both hemispheres 15.4
2438 Female, age 94, left hemisphere 13.5
1901 Male, age 80, both hemispheres 12.2
1977 Female, age 85, both hemispheres 11.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 12.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.5
Samples: 197

Max nTPM: 47.7
Min nTPM: 2.1
Std nTPM: 6.3
Median nTPM: 11.0
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 47.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 43.7
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 30.9
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 30.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 29.2
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 28.1
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 27.6
GTEX-13RTL-0011-R1a-SM-5PNZ8 40-49 years, male 25.4
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 24.9
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 24.5
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 23.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 8.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 8.7
FF:10153-102I9 76 years, female 14.4
FF:10169-103B7 60 years, female 3.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 11.3
Pig sample Sample description nTPM
Subiculum
nTPM: 8.7
Samples: 4

Max nTPM: 9.3
Min nTPM: 7.8
Sample A Female 8.8
Sample B Female 7.8
Sample C Male 9.0
Sample D Male 9.3
Dorsal hippocampus
nTPM: 7.3
Samples: 4

Max nTPM: 8.4
Min nTPM: 5.7
Sample A Female 5.7
Sample B Female 7.1
Sample C Male 8.4
Sample D Male 8.1
Entorhinal cortex
nTPM: 11.3
Samples: 4

Max nTPM: 12.1
Min nTPM: 10.8
Sample A Female 10.9
Sample B Female 10.8
Sample C Male 11.4
Sample D Male 12.1
Ventral hippocampus
nTPM: 8.5
Samples: 4

Max nTPM: 10.8
Min nTPM: 7.3
Sample A Female 7.3
Sample B Female 8.5
Sample C Male 10.8
Sample D Male 7.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 17.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.2
Samples: 4

Max nTPM: 18.5
Min nTPM: 16.0
Sample A Male 18.5
Sample B Male 16.0
Sample C Female 17.5
Sample D Female 16.6
Hippocampal formation
nTPM: 16.7
Samples: 4

Max nTPM: 18.0
Min nTPM: 14.5
Sample A Male 17.9
Sample B Male 16.5
Sample C Female 14.5
Sample D Female 18.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 5.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.4
69838242 Antisense, RP_050224_02_E09, Mouse strain C57BL/6J (56 days, male) 5.4

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