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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
567.6
nTPM
GTEx:
567.6
nTPM
FANTOM5:
46.0
Scaled Tags Per Million
Mouse:
1696.9
nTPM
RETINA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
567.6
GTEx sample id
Sample description
nTPM
Retina Average nTPM: 567.6
Samples: 105
Max nTPM: 856.5
Min nTPM: 259.8
Std nTPM: 116.1
Median nTPM:
386_1
76 years, male
856.5
17_1
71 years, male
796.1
377_1
82 years, female
787.3
384_1
83 years, male
785.5
526_1
61 years, male
765.4
389_1
86 years, female
751.2
394_1
75 years, female
745.5
246_1
77 years, male
728.5
452_1
88 years, female
727.4
4_1
88 years, female
722.6
321_1
62 years, female
721.6
2_1
77 years, female
712.0
379_1
60 years, male
711.5
153_1
70 years, female
694.8
137_1
83 years, male
690.7
265_1
87 years, male
688.4
319_1
81 years, male
676.2
355_1
70 years, female
676.2
396_1
62 years, male
675.4
322_1
76 years, male
674.2
18_1
88 years, male
672.2
320_1
89 years, female
667.5
376_1
75 years, female
659.3
237_1
82 years, male
658.1
6_1
73 years, female
658.0
375_1
74 years, female
655.9
163_1
78 years, male
654.9
120_1
70 years, female
654.4
352_1
62 years, male
650.1
503_1
68 years, male
635.5
404_1
82 years, female
635.1
347_1
72 years, male
620.4
35_1
74 years, female
620.2
126_1
63 years, male
619.4
518_1
75 years, female
615.4
172_1
72 years, female
614.0
506_1
65 years, male
613.3
189_1
76 years, male
612.3
517_1
88 years, male
604.8
217_1
76 years, male
602.2
405_1
91 years, male
601.2
351_1
91 years, male
599.9
480_1
63 years, male
599.9
115_1
83 years, male
599.5
354_1
81 years, female
592.1
177_1
74 years, male
590.7
243_1
75 years, male
589.5
447_1
81 years, male
589.1
316_1
62 years, male
586.5
254_1
77 years, female
583.4
406_1
79 years, male
583.2
145_1
84 years, male
579.2
251_1
78 years, male
569.8
218_1
71 years, female
568.9
307_1
66 years, female
564.7
109_1
81 years, female
562.4
264_1
73 years, female
561.7
99_1
64 years, male
554.8
353_1
82 years, female
552.6
349_1
83 years, male
550.3
335_1
73 years, female
547.3
495_1
57 years, female
546.7
468_1
89 years, male
546.6
499_1
55 years, female
542.1
348_1
84 years, male
534.5
425_1
59 years, female
533.8
356_1
87 years, female
532.8
311_1
78 years, male
524.5
139_1
64 years, female
515.1
42_1
85 years, male
514.8
501_1
88 years, male
512.0
117_1
61 years, male
511.6
173_1
67 years, male
507.4
295_1
61 years, female
505.7
229_1
69 years, female
498.2
318_1
68 years, male
494.8
266_1
85 years, male
493.6
286_1
68 years, female
488.7
119_1
70 years, female
484.9
142_1
61 years, female
482.8
324_1
76 years, male
480.4
350_1
84 years, female
476.4
466_1
57 years, female
475.9
315_1
62 years, female
465.1
308_1
70 years, female
464.4
81_1
67 years, male
461.8
317_1
60 years, male
461.7
288_1
66 years, female
457.1
9_1
66 years, female
456.1
292_1
71 years, male
452.3
293_1
68 years, female
451.4
162_1
79 years, female
445.8
314_1
67 years, male
445.4
313_1
79 years, female
438.8
291_1
76 years, male
437.5
32_1
67 years, male
425.4
41_1
94 years, female
424.6
89_1
63 years, male
379.0
414_1
84 years, female
364.2
491_1
89 years, female
360.9
415_1
77 years, female
351.0
490_1
67 years, female
334.3
43_1
64 years, female
324.7
149_1
88 years, male
291.8
413_1
59 years, female
259.8
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RETINA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.