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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC35F6 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
62.2
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
54.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
50.7
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
47.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
47.1
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
43.9
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
39.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
37.8
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
37.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
35.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
34.5
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
34.4
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
34.3
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
32.6
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
32.4
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
31.2
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
30.3
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
28.7
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
26.9
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
26.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
25.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
23.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
23.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
23.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
20.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
20.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
19.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
19.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
19.2
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
19.0
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
18.9
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
17.8
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
17.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
17.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
17.2
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
17.2
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
17.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
17.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
16.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
16.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
15.8
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
15.5
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
15.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
15.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
14.6
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.4
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
14.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
14.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
13.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
12.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
11.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
11.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
9.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
8.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
5.8
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
4.5
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC35F6 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
28.6
Number of samples
521
Samples
Sample
Description
TPM
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
191.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
130.5
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
130.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
112.1
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
108.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
105.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
103.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
88.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
88.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
85.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
82.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
82.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
74.0
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
72.8
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
70.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
68.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
66.7
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
66.4
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
65.6
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
64.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
63.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
61.6
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
61.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
60.9
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
59.6
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
58.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
57.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
57.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
56.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
55.7
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
55.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
54.9
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
54.2
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
52.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
51.9
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
51.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
50.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
50.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
49.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
49.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
47.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
47.2
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
47.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
46.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
46.8
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
46.8
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
46.3
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
46.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
46.0
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
45.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
45.6
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
45.5
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
45.5
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
45.4
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
45.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
44.7
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
44.3
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
44.0
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
43.8
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
43.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
43.0
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
42.9
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
42.5
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
42.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
42.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
42.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
41.9
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
41.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
41.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
41.4
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
41.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
41.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
41.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
41.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
40.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
40.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
40.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
40.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
40.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
40.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
39.6
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
39.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
39.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
39.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
39.2
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
39.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
38.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
38.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
38.4
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
38.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
38.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
38.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
38.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
38.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
37.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
37.8
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
37.7
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
37.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
37.6
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
37.5
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
37.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
37.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
37.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
37.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
37.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
37.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
36.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
36.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
36.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
36.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
36.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
36.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
36.4
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
36.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
35.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
35.6
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
35.3
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
35.3
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
35.3
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
35.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
35.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
34.8
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
34.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
34.8
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
34.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
34.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
34.7
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
34.7
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
34.7
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
34.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
34.6
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
34.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
33.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
33.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
33.9
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
33.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
33.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
33.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
33.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
33.2
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
33.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
33.1
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
33.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
33.0
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
33.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
32.8
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
32.7
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
32.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
32.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
32.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
32.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
32.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
32.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
32.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
32.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
32.2
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
32.0
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
32.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
31.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
31.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
31.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
31.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
31.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
31.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
31.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
31.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
31.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
31.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
31.0
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
31.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
31.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
31.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
30.7
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.7
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.7
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
30.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
30.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
30.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
30.3
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
30.3
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
30.1
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
30.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
30.0
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
29.9
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
29.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
29.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
29.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
29.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
29.1
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
29.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
29.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
29.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
29.0
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
29.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
28.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
28.8
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
28.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
28.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
28.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
28.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
28.1
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
28.0
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
28.0
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
27.9
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
27.8
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
27.8
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
27.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
27.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
27.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
27.6
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
27.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
27.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
27.4
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
27.4
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
27.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
27.2
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
27.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
27.2
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
27.2
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
27.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
27.1
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
27.1
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
27.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
27.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
26.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
26.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
26.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
26.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
26.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
26.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
26.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
26.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
26.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.0
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
26.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
25.9
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
25.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
25.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
25.7
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
25.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
25.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
25.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
25.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
25.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
25.3
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
25.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
25.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
25.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
25.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
24.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
24.8
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
24.8
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.8
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
24.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
24.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
24.6
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
24.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
24.5
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
24.5
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
24.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
24.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
24.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
24.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
24.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
24.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
24.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
24.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
24.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
23.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
23.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
23.9
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
23.9
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
23.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
23.7
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
23.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
23.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.5
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
23.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
23.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
23.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
23.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
23.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
23.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
23.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
23.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
23.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
23.2
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
23.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.2
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
23.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
23.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
23.1
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
23.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
23.0
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
23.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
22.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
22.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
22.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.8
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
22.7
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.6
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
22.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
22.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
22.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.5
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
22.4
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
22.2
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
22.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
22.1
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
22.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
22.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
22.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
21.9
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
21.8
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
21.7
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
21.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
21.7
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
21.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
21.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
21.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
21.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
21.5
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
21.5
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
21.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
21.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
21.3
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
21.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
21.3
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
21.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
21.2
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
21.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
21.0
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
21.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
21.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
20.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
20.9
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
20.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
20.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
20.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
20.7
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
20.7
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
20.6
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
20.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
20.5
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
20.4
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
20.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
20.3
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
20.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
20.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
20.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
20.1
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.1
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
20.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.0
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
19.9
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
19.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
19.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
19.6
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
19.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
19.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
19.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
19.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
19.5
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
19.3
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
19.3
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
19.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
19.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
18.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
18.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
18.8
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
18.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
18.7
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
18.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
18.5
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
18.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
18.4
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
18.3
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
18.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
18.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
18.1
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
18.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
18.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
18.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
18.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
17.9
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
17.9
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
17.9
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
17.9
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
17.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
17.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
17.5
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
17.4
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
17.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
17.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
17.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
17.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
17.2
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
17.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
17.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
16.6
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
16.6
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
16.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
16.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
16.3
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
16.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
15.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
15.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
15.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
15.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
15.7
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
15.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.6
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
15.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
15.5
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
15.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
15.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.3
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
15.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
15.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.0
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
14.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
14.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
14.4
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
14.3
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
14.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
14.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
14.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
14.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
14.0
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.0
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
14.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
14.0
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
14.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
14.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
13.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
13.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
13.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
13.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
13.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
13.5
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
13.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
13.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
13.0
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
12.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
12.8
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
12.8
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
12.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
12.7
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
12.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
12.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
12.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
12.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
12.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
12.3
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
12.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
12.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
12.0
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
11.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
11.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
11.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
11.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
11.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
11.3
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.2
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
11.2
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
11.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
10.6
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
10.6
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.3
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
10.2
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
10.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
9.5
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
9.4
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
9.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
9.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
8.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
8.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
6.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
6.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
6.0
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
5.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.6
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
3.6
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC35F6 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
74.5
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
68.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
55.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
54.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
50.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
48.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
44.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
43.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
40.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
39.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
37.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
37.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
36.6
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
36.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
35.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
34.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
34.6
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
34.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
33.4
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
32.8
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
32.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
32.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
31.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
30.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
30.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
30.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
30.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
30.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
29.8
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
29.8
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
29.3
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
28.2
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
27.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
27.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
27.3
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
26.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
26.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
26.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
26.0
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
26.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
25.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.5
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
25.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
24.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
24.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
24.3
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
24.1
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
23.6
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
23.0
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
22.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
22.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
22.3
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
22.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
22.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
21.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
21.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
20.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
20.8
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
20.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
20.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
19.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
19.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
19.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
19.5
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
19.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
19.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
19.1
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
19.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
18.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
18.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
18.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
18.6
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
18.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
18.5
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
18.2
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
18.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
17.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
17.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
16.8
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
16.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
16.2
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
15.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
15.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
15.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.3
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
13.7
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.7
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
13.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
10.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SLC35F6 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
38.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
163.6
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
156.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
147.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
130.3
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
123.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
115.5
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
105.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
104.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
99.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
98.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
96.1
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
95.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
92.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
92.3
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
90.6
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
88.9
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
88.3
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
87.4
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
81.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
78.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
76.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
74.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
74.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
72.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
71.3
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
71.0
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
69.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
67.3
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
67.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
67.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
67.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
66.3
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
66.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
65.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
65.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
65.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
63.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
62.3
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
62.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
61.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
60.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
60.1
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
59.4
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
59.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
59.0
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
58.9
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
58.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
58.3
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
57.8
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
57.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
57.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
57.3
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
57.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
56.6
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
56.5
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
55.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
55.8
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
55.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
55.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
54.9
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
54.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
54.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
54.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
54.1
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
54.1
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
53.8
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
53.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
52.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
52.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
52.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
52.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
51.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
51.0
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
50.9
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
50.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
50.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
49.3
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
48.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
48.4
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
48.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
47.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
47.5
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
47.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
47.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
47.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
45.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
45.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
45.2
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
45.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
45.0
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
45.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
44.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
44.1
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
44.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
43.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
43.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
43.7
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
43.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
43.6
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
43.6
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
43.5
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
43.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
42.3
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
42.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
42.1
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
42.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
42.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
41.6
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
41.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
41.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
41.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
40.4
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
40.1
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
40.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
39.5
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
39.4
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
38.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
38.9
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
38.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
38.3
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
38.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
38.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
38.0
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
38.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
37.6
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
37.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
36.7
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
36.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
36.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
36.1
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
36.0
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
35.9
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
35.7
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
35.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
35.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
35.6
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
35.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
34.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
34.4
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
34.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
33.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
33.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
33.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
33.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
33.0
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
32.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
32.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
32.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
32.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
32.5
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
32.3
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
32.2
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
32.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
32.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
31.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
31.7
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
31.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
31.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
31.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
30.8
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
30.8
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
30.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
30.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
30.2
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
30.1
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
29.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
29.9
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
29.6
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
29.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
28.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
28.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
28.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
28.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
27.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
27.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
26.7
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
26.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
26.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
26.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
26.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
25.9
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
25.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
25.2
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
25.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
25.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
24.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
24.8
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
24.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
24.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
23.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
23.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
23.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
23.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
22.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
22.6
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
22.6
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
22.5
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
22.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
22.3
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
22.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
22.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
21.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
21.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
21.6
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
21.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
21.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
21.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
21.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
20.9
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
20.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
20.4
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
19.9
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
19.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
19.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
19.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
18.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
18.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
18.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
18.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
18.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
18.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
18.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
18.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
18.5
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
18.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
18.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
18.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
17.8
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
17.8
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
17.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
17.6
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
17.5
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.7
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
16.6
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
16.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
16.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
15.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.6
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
15.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
15.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
15.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
15.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
14.5
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
14.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
14.4
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
14.3
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
14.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
13.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
13.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
13.5
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
13.4
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
13.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.1
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
11.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
11.3
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
10.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
7.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.7
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.1
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078800003
Tumor
2.1
CPT0007320003
Tumor
1.9
CPT0019130003
Tumor
1.3
CPT0076350001
Normal
1.2
CPT0092160003
Tumor
1.1
CPT0086950003
Tumor
0.9
CPT0001190001
Normal
0.9
CPT0064370003
Tumor
0.9
CPT0001270001
Normal
0.8
CPT0002270011
Tumor
0.8
CPT0086970003
Normal
0.8
CPT0092740003
Normal
0.8
CPT0012550003
Tumor
0.8
CPT0079410003
Tumor
0.8
CPT0025060001
Normal
0.8
CPT0084590001
Normal
0.7
CPT0001340003
Tumor
0.7
CPT0065430003
Tumor
0.7
CPT0014130001
Normal
0.6
CPT0088550004
Tumor
0.6
CPT0078660003
Tumor
0.6
CPT0088690003
Tumor
0.6
CPT0088710001
Normal
0.6
CPT0001350001
Normal
0.6
CPT0092790003
Tumor
0.5
CPT0079430001
Normal
0.5
CPT0075170001
Normal
0.5
CPT0023350003
Tumor
0.5
CPT0063640001
Normal
0.5
CPT0078830003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0086820003
Tumor
0.4
CPT0063330001
Normal
0.4
CPT0010110003
Tumor
0.4
CPT0086360003
Tumor
0.4
CPT0006530001
Normal
0.4
CPT0065870003
Tumor
0.4
CPT0001180009
Tumor
0.3
CPT0063320003
Tumor
0.3
CPT0026420001
Normal
0.3
CPT0023360001
Normal
0.3
CPT0066520001
Normal
0.3
CPT0086890003
Normal
0.3
CPT0065930003
Tumor
0.3
CPT0011410003
Tumor
0.2
CPT0010120001
Normal
0.2
CPT0014160003
Tumor
0.2
CPT0087040003
Tumor
0.2
CPT0000640003
Tumor
0.2
CPT0000890001
Normal
0.2
CPT0075130003
Tumor
0.2
CPT0001500009
Tumor
0.2
CPT0089040001
Normal
0.2
CPT0014450004
Tumor
0.1
CPT0088640003
Normal
0.1
CPT0087050003
Normal
0.1
CPT0086830003
Normal
0.1
CPT0006730001
Normal
0.1
CPT0025050003
Tumor
0.1
CPT0078530001
Normal
0.1
CPT0077140001
Normal
0.1
CPT0088480003
Tumor
0.0
CPT0077110003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0088780001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0092800003
Normal
0.0
CPT0075570001
Normal
0.0
CPT0066470004
Tumor
0.0
CPT0065690003
Tumor
0.0
CPT0023690003
Tumor
0.0
CPT0065810003
Tumor
-0.1
CPT0001510001
Normal
-0.1
CPT0019990003
Tumor
-0.1
CPT0025580004
Tumor
-0.1
CPT0025170003
Tumor
-0.1
CPT0081880003
Tumor
-0.1
CPT0079380003
Tumor
-0.1
CPT0078930003
Tumor
-0.1
CPT0064400001
Normal
-0.1
CPT0088920001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0092310003
Normal
-0.1
CPT0020120003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0089480003
Normal
-0.2
CPT0079480003
Tumor
-0.2
CPT0088500001
Normal
-0.2
CPT0000790001
Normal
-0.2
CPT0077310003
Tumor
-0.2
CPT0066430001
Normal
-0.2
CPT0076330003
Tumor
-0.2
CPT0010170001
Normal
-0.2
CPT0075720003
Tumor
-0.2
CPT0012290003
Normal
-0.2
CPT0006900003
Tumor
-0.2
CPT0001220008
Tumor
-0.2
CPT0014350001
Normal
-0.2
CPT0001550001
Normal
-0.3
CPT0079230003
Tumor
-0.3
CPT0077320001
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0002350011
Tumor
-0.3
CPT0078990003
Tumor
-0.3
CPT0069190001
Normal
-0.3
CPT0025290003
Tumor
-0.3
CPT0014370004
Tumor
-0.3
CPT0089020003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0015810003
Tumor
-0.3
CPT0020130001
Normal
-0.3
CPT0081600003
Tumor
-0.3
CPT0026410003
Tumor
-0.3
CPT0078670001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0012090003
Normal
-0.4
CPT0000870016
Tumor
-0.4
CPT0023710001
Normal
-0.4
CPT0066480003
Tumor
-0.4
CPT0001540009
Tumor
-0.4
CPT0082010001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0014470001
Normal
-0.4
CPT0065750003
Tumor
-0.4
CPT0086870003
Tumor
-0.4
CPT0025920001
Normal
-0.4
CPT0079270003
Tumor
-0.4
CPT0092730003
Tumor
-0.4
CPT0089460004
Tumor
-0.4
CPT0069160003
Tumor
-0.5
CPT0002370001
Normal
-0.5
CPT0006440003
Tumor
-0.5
CPT0065450001
Normal
-0.5
CPT0077500001
Normal
-0.5
CPT0025110003
Tumor
-0.5
CPT0006950001
Normal
-0.5
CPT0025350003
Tumor
-0.6
CPT0009060003
Tumor
-0.6
CPT0000780007
Tumor
-0.6
CPT0079000001
Normal
-0.6
CPT0012280003
Tumor
-0.6
CPT0020020001
Normal
-0.6
CPT0013790003
Normal
-0.6
CPT0081620001
Normal
-0.6
CPT0001260009
Tumor
-0.6
CPT0078840001
Normal
-0.6
CPT0071150004
Tumor
-0.6
CPT0010160003
Tumor
-0.6
CPT0012180003
Tumor
-0.6
CPT0088630003
Tumor
-0.6
CPT0088900003
Tumor
-0.6
CPT0017450001
Normal
-0.7
CPT0025610001
Normal
-0.7
CPT0079300001
Normal
-0.7
CPT0085670003
Tumor
-0.7
CPT0077490003
Tumor
-0.7
CPT0092190003
Normal
-0.8
CPT0015730003
Tumor
-0.8
CPT0012920003
Normal
-0.8
CPT0012570003
Normal
-0.8
CPT0001230001
Normal
-0.8
CPT0079180003
Tumor
-0.9
CPT0025230003
Tumor
-0.9
CPT0086030003
Tumor
-0.9
CPT0007860003
Tumor
-0.9
CPT0081990003
Tumor
-0.9
CPT0088760003
Tumor
-0.9
CPT0092290003
Tumor
-0.9
CPT0025880003
Tumor
-0.9
CPT0012370003
Tumor
-0.9
CPT0017850003
Tumor
-0.9
CPT0012670003
Tumor
-0.9
CPT0018250001
Normal
-1.0
CPT0009000003
Tumor
-1.0
CPT0024680001
Normal
-1.0
CPT0075560003
Tumor
-1.0
CPT0012640003
Normal
-1.1
CPT0009020003
Normal
-1.1
CPT0084560003
Tumor
-1.1
CPT0012770003
Normal
-1.2
CPT0079510001
Normal
-1.2
CPT0069010001
Normal
-1.2
CPT0006630003
Tumor
-1.2
CPT0078510003
Tumor
-1.3
CPT0012900004
Tumor
-1.3
CPT0012080003
Tumor
-1.4
CPT0069000003
Tumor
-1.4
CPT0024670003
Tumor
-1.5
CPT0015910003
Tumor
-1.5
CPT0009080003
Normal
-1.6
CPT0017410003
Tumor
-1.7
CPT0021240003
Tumor
-1.8
CPT0011240003
Tumor
-1.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.