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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
128.0
nTPM
HPA Brain:
136.8
nTPM
GTEx:
128.0
nTPM
FANTOM5:
117.6
Scaled Tags Per Million
Pig:
316.7
nTPM
Mouse:
456.4
nTPM
Allen mouse:
16.1
Expression energy
MIDBRAIN - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
136.8
Sample id
Sample description
nTPM
Cuneiform nucleus nTPM: 106.7
2019
Male, age 18, unknown
151.0
1827
Male, age 72, unknown
124.9
2411
Female, age 72, unknown
123.8
2219
Male, age 76, both hemispheres
105.4
1870
Female, age 42, unknown
97.3
2666
Male, age 74, left hemisphere
97.1
2828
Female, age 72, unknown
95.6
1833
Male, age 53, unknown
93.2
2586
Male, age 75, left hemisphere
92.3
1830
Male, age 51, unknown
86.0
Dorsal raphe nucleus nTPM: 122.6
2298
Female, age 72, unknown
149.6
2047
Male, age 72, unknown
130.1
1828
Male, age 53, unknown
128.7
2750
Male, age 76, both hemispheres
117.8
2016
Female, age 72, unknown
86.8
Inferior colliculus nTPM: 115.5
2097
Female, age 72, unknown
148.6
1890
Male, age 53, unknown
124.8
1848
Female, age 42, unknown
103.1
2849
Male, age 72, unknown
85.4
Median raphe nucleus nTPM: 135.8
2220
Male, age 76, midline
135.8
Periaquaductal grey, anterior nTPM: 111.1
1947
Male, age 18, unknown
117.9
1795
Male, age 51, unknown
112.6
2502
Female, age 75, unknown
102.6
Periaquaductal grey, dorsal nTPM: 97.3
1831
Male, age 72, unknown
106.5
2850
Male, age 76, both hemispheres
101.0
1840
Male, age 53, unknown
91.9
2464
Female, age 72, unknown
89.8
Periaquaductal grey, lateral nTPM: 100.3
2272
Male, age 74, both hemispheres
123.8
2140
Male, age 76, both hemispheres
89.4
2053
Male, age 18, unknown
87.6
Pretectal area nTPM: 135.8
1816
Male, age 51, unknown
180.1
1817
Female, age 42, unknown
179.8
2007
Male, age 72, unknown
174.8
1944
Female, age 72, unknown
167.6
1815
Male, age 53, unknown
140.7
2667
Female, age 75, unknown
133.6
2273
Male, age 74, both hemispheres
124.0
2224
Female, age 72, unknown
116.5
2407
Male, age 75, both hemispheres
96.6
2825
Male, age 18, unknown
90.5
2316
Male, age 76, right hemisphere
89.9
Red nucleus nTPM: 120.8
1821
Female, age 72, unknown
171.4
2785
Male, age 18, unknown
135.7
2725
Female, age 75, unknown
132.8
1954
Female, age 42, unknown
131.6
2823
Male, age 76, right hemisphere
123.2
1904
Male, age 53, unknown
119.3
1865
Male, age 51, unknown
118.8
2503
Female, age 72, unknown
107.2
2769
Male, age 72, unknown
105.7
2227
Male, age 72, unknown
105.6
2584
Male, age 75, left hemisphere
99.3
2588
Male, age 74, left hemisphere
99.0
Substantia nigra nTPM: 136.8
1916
Female, age 42, unknown
178.7
1889
Female, age 72, unknown
165.8
2241
Male, age 72, unknown
159.2
1941
Male, age 53, unknown
150.5
1851
Male, age 51, unknown
146.8
2409
Female, age 72, unknown
129.5
2590
Female, age 75, unknown
121.3
2699
Male, age 18, unknown
109.2
2665
Male, age 74, both hemispheres
104.8
2583
Male, age 75, right hemisphere
101.6
Superior colliculus nTPM: 104.7
2087
Female, age 72, unknown
142.4
2261
Male, age 18, unknown
119.7
1796
Male, age 53, unknown
114.5
2587
Male, age 74, left hemisphere
109.6
2668
Female, age 75, unknown
109.1
1895
Male, age 76, right hemisphere
105.4
1839
Male, age 51, unknown
93.4
1913
Female, age 42, unknown
89.4
2664
Male, age 75, both hemispheres
84.5
1995
Male, age 72, unknown
78.5
Ventral tegmental area nTPM: 124.0
2410
Female, age 72, unknown
156.9
2218
Male, age 76, both hemispheres
145.7
1915
Female, age 42, unknown
136.6
1942
Male, age 51, unknown
108.4
2223
Female, age 72, unknown
103.7
2021
Male, age 53, unknown
92.5
MIDBRAIN - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
128.0
GTEx sample id
Sample description
nTPM
Brain - Substantia nigra Average nTPM: 128.0
Samples: 139
Max nTPM: 319.6
Min nTPM: 56.9
Std nTPM: 45.4
Median nTPM: 114.9
GTEX-Z93S-0011-R2a-SM-4RGNG
50-59 years, male
319.6
GTEX-15ER7-0011-R2a-SM-6M46O
20-29 years, female
292.9
GTEX-1B8L1-0011-R2a-SM-9OSVL
60-69 years, male
260.9
GTEX-1313W-0011-R2a-SM-5EGLF
50-59 years, female
255.0
GTEX-1B933-0011-R2b-SM-7IGNM
50-59 years, female
224.8
GTEX-1EMGI-0011-R2b-SM-9OSVS
60-69 years, male
215.3
GTEX-1LH75-0011-R2b-SM-EYYWQ
50-59 years, female
212.4
GTEX-14BIM-0011-R2b-SM-69LQ6
60-69 years, female
206.8
GTEX-1HB9E-0011-R2b-SM-A96RW
50-59 years, male
202.7
GTEX-1HT8W-0011-R2a-SM-CMKH9
30-39 years, male
200.1
GTEX-13O3Q-0011-R2b-SM-5KM3K
50-59 years, male
198.3
GTEX-11DZ1-0011-R2a-SM-DNZZM
50-59 years, male
185.9
GTEX-14C5O-0011-R2a-SM-5ZZV2
60-69 years, male
185.8
GTEX-13OW6-0011-R2a-SM-5L3HG
50-59 years, male
184.4
GTEX-13NYS-0011-R2b-SM-5MR4G
60-69 years, male
183.7
GTEX-11GSP-0011-R2b-SM-9QEGE
60-69 years, female
182.8
GTEX-X585-0011-R2B-SM-46MVF
50-59 years, male
180.0
GTEX-1MA7X-0011-R2b-SM-EZ6MT
60-69 years, male
176.7
GTEX-13SLX-0011-R2b-SM-5S2VP
50-59 years, female
176.1
GTEX-WHSE-0011-R2A-SM-3P5ZL
20-29 years, male
175.8
GTEX-1LVAO-0011-R2a-SM-EYYX1
60-69 years, male
175.2
GTEX-1399T-0011-R2b-SM-5DUXM
60-69 years, male
173.8
GTEX-1CB4G-0011-R2a-SM-9QEGQ
60-69 years, male
171.2
GTEX-1HFI6-0011-R2a-SM-CMKH5
40-49 years, male
170.4
GTEX-N7MS-0011-R2a-SM-2HML6
60-69 years, male
169.5
GTEX-1IY9M-0011-R2a-SM-D4P29
60-69 years, male
169.5
GTEX-15CHQ-0011-R2b-SM-6AJAD
60-69 years, male
167.2
GTEX-12ZZX-0011-R2a-SM-5EGLG
40-49 years, female
167.0
GTEX-1E1VI-0011-R2a-SM-9QEGS
50-59 years, male
164.0
GTEX-1A3MX-0011-R2b-SM-7EWFL
60-69 years, male
161.6
GTEX-1GN73-0011-R2a-SM-CJI2V
60-69 years, male
160.8
GTEX-QDT8-0011-R2A-SM-32PKQ
30-39 years, female
159.4
GTEX-1EKGG-0011-R2a-SM-CE6R8
60-69 years, male
156.7
GTEX-14PN4-0011-R2a-SM-6EU2Y
50-59 years, male
150.9
GTEX-1445S-0011-R2b-SM-5PNUH
60-69 years, male
150.4
GTEX-13G51-0011-R2b-SM-5LZXS
60-69 years, male
149.0
GTEX-1H1ZS-0011-R2b-SM-CL54Q
70-79 years, male
147.3
GTEX-1H3VE-0011-R2a-SM-CE6SA
40-49 years, male
147.2
GTEX-1GZ2Q-0011-R2b-SM-9OSWO
40-49 years, male
146.3
GTEX-15EO6-0011-R2a-SM-6M46R
50-59 years, male
145.3
GTEX-T5JC-0011-R2A-SM-32PLZ
20-29 years, male
144.9
GTEX-13RTJ-0011-R2a-SM-5PNW9
60-69 years, male
143.7
GTEX-14JG1-0011-R2a-SM-5ZZVE
40-49 years, male
141.5
GTEX-P44G-0011-R2A-SM-2XCD2
30-39 years, male
141.5
GTEX-QMR6-0011-R2A-SM-32PKV
50-59 years, male
141.4
GTEX-13OVJ-0011-R2b-SM-5L3GP
50-59 years, female
140.5
GTEX-15DYW-0011-R2b-SM-7KUKY
60-69 years, female
140.1
GTEX-1F6I4-0011-R2a-SM-CL536
60-69 years, male
136.9
GTEX-145LS-0011-R2a-SM-5PNZI
60-69 years, female
136.7
GTEX-RU72-0011-R2A-SM-2TF6O
50-59 years, female
136.1
GTEX-1LSNL-0011-R2a-SM-EZ6MK
50-59 years, male
134.6
GTEX-13SLW-0011-R2b-SM-5O9C6
70-79 years, male
133.1
GTEX-S7SE-0011-R2A-SM-2XCDC
50-59 years, male
132.9
GTEX-1GMR8-0011-R2a-SM-CE6RD
50-59 years, female
129.0
GTEX-XLM4-0011-R2B-SM-4AT5Z
60-69 years, male
127.7
GTEX-12WSF-0011-R2a-SM-5DUVU
70-79 years, male
126.7
GTEX-Q2AG-0011-R2A-SM-2HMIT
40-49 years, female
126.4
GTEX-NL4W-0011-R2a-SM-2I5GV
50-59 years, male
124.5
GTEX-1IGQW-0011-R2b-SM-D4P26
60-69 years, male
121.6
GTEX-1F48J-0011-R2a-SM-CL535
50-59 years, female
121.1
GTEX-13X6I-0011-R2b-SM-5PNWQ
60-69 years, male
120.8
GTEX-13O3O-0011-R2b-SM-5P9H1
60-69 years, female
120.4
GTEX-1I1GS-0011-R2b-SM-CMKHG
60-69 years, male
120.0
GTEX-13N2G-0011-R2a-SM-5MR4Q
60-69 years, male
119.9
GTEX-13OW8-0011-R2a-SM-5L3G2
60-69 years, male
119.8
GTEX-13FXS-0011-R2b-SM-5K7XX
50-59 years, male
117.8
GTEX-15RJE-0011-R2b-SM-79OMP
40-49 years, male
117.4
GTEX-R55E-0011-R2A-SM-EYYV9
20-29 years, male
116.8
GTEX-T6MN-0011-R2A-SM-32QOW
50-59 years, male
115.5
GTEX-12WSH-0011-R2a-SM-5GU68
50-59 years, male
114.9
GTEX-13PDP-0011-R2b-SM-5O9DH
60-69 years, male
114.4
GTEX-1J1OQ-0011-R2b-SM-ARU88
40-49 years, female
114.3
GTEX-147GR-0011-R2b-SM-5S2RQ
60-69 years, male
113.7
GTEX-13X6K-0011-R2b-SM-5P9K3
60-69 years, female
113.0
GTEX-14BIN-0011-R2a-SM-5S2RJ
50-59 years, female
113.0
GTEX-11TUW-0011-R2b-SM-DO92T
60-69 years, male
112.6
GTEX-11GS4-0011-R2a-SM-DO942
60-69 years, male
112.0
GTEX-1HSMO-0011-R2a-SM-CL553
60-69 years, male
111.7
GTEX-16Z82-0011-R2b-SM-79OK9
60-69 years, male
110.9
GTEX-11GSO-0011-R2a-SM-57WDF
60-69 years, male
109.6
GTEX-17EVP-0011-R2a-SM-7LG4W
40-49 years, male
108.9
GTEX-NPJ8-0011-R2a-SM-2TC6M
40-49 years, male
108.3
GTEX-1EU9M-0011-R2b-SM-9QEH7
60-69 years, male
108.0
GTEX-1RLM8-0011-R2a-SM-EZ6N4
50-59 years, male
107.5
GTEX-1B996-0011-R2a-SM-7IGON
60-69 years, male
106.5
GTEX-1IKJJ-0011-R2b-SM-ARZLJ
60-69 years, male
106.4
GTEX-OXRO-0011-R2A-SM-3NB1W
60-69 years, female
106.3
GTEX-1LVA9-0011-R2a-SM-EZ6MJ
50-59 years, male
106.3
GTEX-1F6IF-0011-R2b-SM-9QEHB
60-69 years, male
106.0
GTEX-1B8SG-0011-R2b-SM-79OOT
50-59 years, male
105.8
GTEX-1GN1U-0011-R2a-SM-CL53A
50-59 years, female
105.8
GTEX-YFC4-0011-R2a-SM-4V6DZ
40-49 years, female
105.5
GTEX-1H3O1-0011-R2b-SM-CKZOT
60-69 years, male
104.9
GTEX-131XH-0011-R2b-SM-5DUVY
50-59 years, male
104.0
GTEX-UTHO-0011-R2A-SM-3GIKC
60-69 years, male
102.6
GTEX-ZV68-0011-R2a-SM-4YCDK
50-59 years, female
102.6
GTEX-1GTWX-0011-R2b-SM-ADEH5
60-69 years, male
101.8
GTEX-1JMQK-0011-R2a-SM-EYYXQ
60-69 years, male
101.7
GTEX-1A8G7-0011-R2a-SM-7IGQI
60-69 years, male
99.7
GTEX-11WQC-0011-R2a-SM-DO927
60-69 years, male
99.7
GTEX-NPJ7-0011-R2a-SM-2I3GF
60-69 years, female
98.4
GTEX-ZAB4-0011-R2a-SM-4RGNP
40-49 years, male
98.0
GTEX-T2IS-0011-R2A-SM-32QPF
20-29 years, female
97.5
GTEX-132Q8-0011-R2b-SM-5EQ5Z
60-69 years, male
96.9
GTEX-PWO3-0011-R2A-SM-2S1OX
60-69 years, female
96.8
GTEX-15DCD-0011-R2b-SM-6LPIE
70-79 years, female
95.7
GTEX-11EMC-0011-R2b-SM-DO114
60-69 years, female
95.6
GTEX-13QJC-0011-R2b-SM-5PNUN
60-69 years, female
94.6
GTEX-1H1DG-0011-R2a-SM-ADEIQ
70-79 years, male
93.7
GTEX-1F75B-0011-R2a-SM-ARL8I
50-59 years, male
93.0
GTEX-14PJO-0011-R2a-SM-5ZZVF
60-69 years, male
91.4
GTEX-14ASI-0011-R2b-SM-5YY9H
60-69 years, male
91.2
GTEX-1C6VR-0011-R2a-SM-7RHGZ
60-69 years, male
90.8
GTEX-13CF2-0011-R2a-SM-5L3DC
60-69 years, male
90.4
GTEX-13NYB-0011-R2a-SM-5MR3C
40-49 years, male
88.0
GTEX-1J8Q2-0011-R2b-SM-EAZ2X
60-69 years, male
87.5
GTEX-1H23P-0011-R2a-SM-CKZP3
60-69 years, male
86.9
GTEX-17HG3-0011-R2a-SM-7MGVX
30-39 years, female
86.7
GTEX-1I1CD-0011-R2a-SM-CM2T3
60-69 years, female
86.7
GTEX-1HR98-0011-R2a-SM-ARL7A
60-69 years, male
85.9
GTEX-11UD1-0011-R2b-SM-5BC6O
40-49 years, female
85.3
GTEX-1GN2E-0011-R2a-SM-9WG7D
60-69 years, male
85.1
GTEX-1IKOH-0011-R2a-SM-CMKHO
60-69 years, female
84.5
GTEX-XMD1-0011-R2B-SM-4AT5N
60-69 years, male
84.4
GTEX-11PRG-0011-R2a-SM-69LQ5
50-59 years, male
84.1
GTEX-ZE9C-0011-R2a-SM-4WKGH
60-69 years, male
82.2
GTEX-12WSD-0011-R2a-SM-5LZWB
60-69 years, female
82.0
GTEX-YJ89-0011-R2b-SM-4RGLT
60-69 years, male
80.7
GTEX-X4XX-0011-R2A-SM-3P623
60-69 years, male
79.1
GTEX-1I1GV-0011-R2a-SM-ARZLF
60-69 years, male
78.9
GTEX-N7MT-0011-R2a-SM-2I3GI
60-69 years, female
78.8
GTEX-11ZTS-0011-R2b-SM-5BC75
60-69 years, female
75.5
GTEX-ZDXO-0011-R2b-SM-4WKFG
60-69 years, male
74.3
GTEX-18464-0011-R2a-SM-731AL
50-59 years, male
71.3
GTEX-12WSA-0011-R2a-SM-57WDK
60-69 years, male
69.3
GTEX-1LB8K-0011-R2a-SM-EZ6MQ
50-59 years, male
65.6
GTEX-1IL2U-0011-R2a-SM-ARU6V
60-69 years, male
62.0
GTEX-OHPN-0011-R2A-SM-2I5FB
60-69 years, female
58.5
GTEX-139TS-0011-R2b-SM-5J1MX
60-69 years, male
56.9
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MIDBRAIN - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
456.4
Mouse sample
Sample description
nTPM
Midbrain nTPM: 456.4
Samples: 4
Max nTPM: 463.2
Min nTPM: 449.7
Sample A
Male
454.9
Sample B
Male
463.2
Sample C
Female
457.9
Sample D
Female
449.7
MIDBRAIN - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.