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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRCAP is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
4.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
33.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
16.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
12.9
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
11.4
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
11.0
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
10.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
10.3
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.7
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
8.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
8.3
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
7.6
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
7.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
7.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
7.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
6.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
6.1
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
5.8
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
5.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
5.5
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
5.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
5.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
5.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
4.6
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
4.4
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
3.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
3.0
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
3.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
2.9
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
2.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
2.3
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
2.3
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
2.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
2.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
2.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
1.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.8
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
1.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.7
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
1.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
1.5
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.3
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.3
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.9
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.9
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.8
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.7
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.5
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.4
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.3
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRCAP is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.7
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
138.2
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
132.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
132.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
121.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
117.7
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
112.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
111.4
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
97.8
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
96.5
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
92.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
88.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
88.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
85.5
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
84.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
83.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
82.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
82.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
82.3
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
77.3
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
76.4
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
75.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
74.5
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
74.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
73.5
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
73.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
73.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
72.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
71.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
71.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
68.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
67.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
66.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
65.0
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
64.0
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
63.6
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
63.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
63.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
62.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
61.4
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
60.9
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
60.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
59.7
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
59.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
58.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
58.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
58.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
58.5
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
58.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
57.7
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
57.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
57.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
56.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
56.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
55.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
55.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
54.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
54.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
53.3
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
52.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
51.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
51.0
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
50.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
49.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
49.5
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
48.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
47.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
47.4
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
47.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
47.0
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
46.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
46.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
45.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
45.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
45.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
44.9
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
44.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
44.4
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
44.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
43.5
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
42.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
41.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
41.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
40.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
40.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
39.9
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
39.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
39.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
39.3
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
39.1
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
39.1
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
39.1
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
38.8
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
38.5
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
37.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
37.3
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
36.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
36.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
36.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
36.4
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
36.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
36.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
36.3
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
36.2
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
35.8
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
35.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
35.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
34.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
34.7
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
34.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
34.0
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
33.9
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
33.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
33.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
33.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
33.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
32.9
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
32.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
32.6
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
32.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
32.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
31.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
31.2
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
31.1
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
30.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
30.6
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
30.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
30.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
30.0
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
29.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
29.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
29.5
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
29.5
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
29.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
29.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
29.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
29.1
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
28.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
28.7
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.5
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
28.4
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
27.8
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
27.7
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
27.7
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
27.5
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
27.3
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
27.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
26.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
26.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
26.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
26.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
26.1
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
26.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
25.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
25.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
25.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
25.3
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
25.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
25.2
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
25.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
25.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
25.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
24.7
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
24.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
24.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
24.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
24.2
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
24.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
24.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
23.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
23.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
23.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
23.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
23.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
22.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
22.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
22.7
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.6
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
22.3
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
22.3
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
21.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
21.9
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
21.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
21.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.6
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
21.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
21.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.4
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.2
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
21.1
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
21.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.0
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
20.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
20.8
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
20.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
20.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
20.3
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
20.1
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
20.1
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
20.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
19.9
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
19.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
19.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
19.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
19.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
19.4
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
19.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
19.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
19.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
19.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
19.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
19.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
19.1
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
18.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
18.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
18.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
18.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
18.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
18.6
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
18.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
18.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
18.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
18.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
17.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
17.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
17.9
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
17.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
17.8
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
17.7
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
17.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
17.3
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
17.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
17.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
17.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
17.1
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
16.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
16.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
16.6
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
16.6
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
16.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
16.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
16.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
16.4
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
16.4
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
16.2
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
16.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
16.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
16.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
16.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
16.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.0
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
15.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
15.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
15.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.6
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
15.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
15.6
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
15.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
15.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
15.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
15.3
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.3
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
15.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
15.1
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
15.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
15.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
15.1
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.9
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
14.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
14.9
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
14.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
14.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
14.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.4
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
14.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
14.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
14.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
14.3
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
14.2
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
14.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
14.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
14.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.9
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
13.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
13.8
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.8
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
13.8
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
13.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
13.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
13.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
13.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
13.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
13.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
13.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
13.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
13.3
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
13.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
13.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
13.3
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
13.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
13.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
12.9
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
12.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
12.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
12.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
12.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
12.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
12.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
12.5
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
12.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
12.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
12.3
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
12.2
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
12.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
12.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
12.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
12.1
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
12.1
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
12.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
12.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.0
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
11.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
11.9
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
11.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
11.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
11.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.6
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.6
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.4
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
11.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
11.3
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
11.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
11.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
11.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
11.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
11.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
11.0
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
11.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
11.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
10.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
10.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
10.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
10.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
10.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
10.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
10.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
10.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
10.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
10.6
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
10.6
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
10.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
10.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
10.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
10.4
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
10.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
10.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
10.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.1
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
10.0
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
9.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
9.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
9.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
9.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
9.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
9.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
9.8
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
9.7
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
9.7
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
9.6
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
9.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
9.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
9.2
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.2
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
9.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.0
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
8.9
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
8.8
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
8.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
8.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
8.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
8.5
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
8.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.4
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
8.4
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
8.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
8.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
8.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
8.2
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
8.1
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
8.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
8.1
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
8.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
8.0
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
7.9
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
7.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
7.9
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
7.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
7.5
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
7.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
7.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
7.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
7.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
7.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
7.2
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
7.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
7.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
6.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
6.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
6.9
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
6.8
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
6.8
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
6.8
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
6.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
6.8
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
6.7
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
6.5
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.5
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
6.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
6.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
6.3
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
6.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
6.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
6.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
6.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
5.9
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
5.8
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
5.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
5.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
5.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
5.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
5.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
5.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
5.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
5.5
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
5.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
5.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
5.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
5.4
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
5.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
5.3
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
5.3
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
5.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
5.2
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
5.2
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
4.8
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
4.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
4.7
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
4.6
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
4.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
4.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
4.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
4.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
4.1
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
3.9
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
3.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
3.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
3.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
3.5
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
3.3
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
3.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
3.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
3.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
3.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
3.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
2.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
2.7
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
2.2
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
2.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
1.9
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
1.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
1.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
1.5
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
1.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.4
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
1.0
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
1.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
0.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
0.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
0.6
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.4
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRCAP is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
26.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
138.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
113.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
100.0
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
85.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
80.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
76.5
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
75.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
65.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
64.6
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
61.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
59.7
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
53.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
50.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
50.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
44.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
44.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
44.4
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
42.1
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
41.4
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
41.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
41.1
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
39.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
38.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
36.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
36.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
34.8
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
34.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
33.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
32.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
32.0
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
31.9
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
30.8
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
30.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
29.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
28.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
27.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
26.0
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
24.6
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
24.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
24.4
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
23.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
23.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
22.7
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
21.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
20.8
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
20.4
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
18.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
17.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.8
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
16.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
16.5
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
16.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
16.2
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.9
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
15.9
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
14.5
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
13.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
13.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
12.7
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
12.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
11.8
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.5
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
11.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
11.0
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
10.9
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
10.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
10.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
10.4
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
10.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
9.3
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
9.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
9.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
9.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
8.4
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.3
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
6.5
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
6.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
6.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
6.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
6.2
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
5.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
5.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
5.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
5.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
5.1
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
4.7
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
3.6
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
3.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
3.4
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
3.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
1.8
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
1.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
1.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
1.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PTPRCAP is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
281.6
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
138.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
131.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
89.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
56.3
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
55.4
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
54.1
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
51.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
51.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
48.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
46.3
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
45.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
41.3
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
39.8
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
37.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
37.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
36.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
36.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
36.3
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
36.1
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
34.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
33.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
33.3
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
32.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
32.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
31.1
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
30.6
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
30.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
30.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
29.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
26.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
26.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
26.5
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
26.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
25.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
25.1
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
25.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
24.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
24.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
23.9
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
23.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
23.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
22.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
22.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
22.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
22.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
22.1
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
22.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
21.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
21.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
21.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
20.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
20.8
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
20.7
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
20.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
20.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
20.5
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
20.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
19.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.3
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
19.1
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
19.1
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
19.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
19.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
18.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.8
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
18.6
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
18.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
18.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
18.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
18.4
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
18.2
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
17.9
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
17.3
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
16.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
16.3
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
15.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
15.3
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
15.1
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
14.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
14.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
14.5
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
14.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
14.2
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.9
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
13.8
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
13.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
13.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
13.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
13.6
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
13.4
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
13.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.9
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
12.8
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
12.7
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
12.7
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
12.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
12.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
11.9
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.8
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
11.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
11.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
11.7
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
11.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
11.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
11.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
11.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
11.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
11.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
11.4
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
11.3
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
11.2
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
11.1
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.8
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
10.7
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
10.1
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
10.0
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
10.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
9.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
9.6
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
9.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
9.4
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.3
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
9.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
9.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
8.9
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
8.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
8.6
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
8.3
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
8.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
8.2
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
8.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
8.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
8.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
7.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
7.8
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
7.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
7.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
7.6
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
7.6
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
7.5
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
7.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
7.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
7.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
7.2
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
7.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.9
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
6.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
6.8
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
6.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
6.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
6.5
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
6.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
6.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
6.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
6.4
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
6.4
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
6.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
6.3
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
6.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
6.2
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.1
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
6.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
6.0
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
6.0
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
6.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
6.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.9
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
5.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
5.8
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
5.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
5.6
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
5.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
5.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
5.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
5.4
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
5.3
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
5.2
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
5.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
5.1
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
5.1
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
5.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
5.0
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
5.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
5.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
4.9
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
4.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
4.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
4.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
4.5
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
4.5
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
4.5
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
4.5
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
4.4
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
4.4
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
4.3
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
4.1
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
4.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
3.8
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
3.8
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
3.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
3.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
3.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
3.6
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
3.5
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
3.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
3.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
3.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
3.2
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
3.2
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
3.2
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.1
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
3.1
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
3.1
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
3.1
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.0
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.0
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
2.9
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
2.9
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
2.8
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
2.8
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
2.7
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
2.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
2.6
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
2.6
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
2.6
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
2.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
2.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
2.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
2.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
2.4
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
2.4
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
2.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.3
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
2.3
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
2.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
2.1
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
1.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
1.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
1.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
1.8
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
1.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
1.6
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
1.5
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.4
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
1.4
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
1.3
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
1.2
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.1
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.1
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
1.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
0.9
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.6
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0012180003
Tumor
2.6
CPT0088550004
Tumor
2.5
CPT0078990003
Tumor
2.2
CPT0023690003
Tumor
1.4
CPT0086360003
Tumor
1.3
CPT0092730003
Tumor
1.2
CPT0025290003
Tumor
1.1
CPT0075560003
Tumor
1.1
CPT0010110003
Tumor
1.0
CPT0023350003
Tumor
1.0
CPT0012280003
Tumor
1.0
CPT0065430003
Tumor
0.9
CPT0065870003
Tumor
0.9
CPT0092790003
Tumor
0.9
CPT0001500009
Tumor
0.8
CPT0087040003
Tumor
0.8
CPT0001260009
Tumor
0.8
CPT0002350011
Tumor
0.8
CPT0088690003
Tumor
0.8
CPT0001540009
Tumor
0.8
CPT0065690003
Tumor
0.7
CPT0066480003
Tumor
0.7
CPT0077320001
Normal
0.7
CPT0065810003
Tumor
0.6
CPT0088570001
Normal
0.6
CPT0012670003
Tumor
0.6
CPT0078930003
Tumor
0.5
CPT0081880003
Tumor
0.5
CPT0025170003
Tumor
0.4
CPT0079410003
Tumor
0.4
CPT0081600003
Tumor
0.3
CPT0007860003
Tumor
0.3
CPT0076330003
Tumor
0.3
CPT0012290003
Normal
0.3
CPT0009060003
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0017410003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0025880003
Tumor
0.2
CPT0079270003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0088760003
Tumor
0.1
CPT0069000003
Tumor
0.0
CPT0021240003
Tumor
0.0
CPT0009000003
Tumor
0.0
CPT0011410003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0065820001
Normal
0.0
CPT0014370004
Tumor
0.0
CPT0017850003
Tumor
0.0
CPT0066520001
Normal
0.0
CPT0075720003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0019130003
Tumor
-0.1
CPT0089460004
Tumor
-0.1
CPT0001270001
Normal
-0.1
CPT0088630003
Tumor
-0.2
CPT0018250001
Normal
-0.2
CPT0077110003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0084590001
Normal
-0.2
CPT0006630003
Tumor
-0.2
CPT0000890001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0081620001
Normal
-0.3
CPT0025110003
Tumor
-0.3
CPT0000780007
Tumor
-0.3
CPT0086370003
Normal
-0.3
CPT0063630003
Tumor
-0.3
CPT0001510001
Normal
-0.4
CPT0025580004
Tumor
-0.4
CPT0000660001
Normal
-0.4
CPT0078830003
Tumor
-0.4
CPT0014470001
Normal
-0.4
CPT0023360001
Normal
-0.4
CPT0065930003
Tumor
-0.4
CPT0086820003
Tumor
-0.4
CPT0002370001
Normal
-0.5
CPT0025610001
Normal
-0.5
CPT0012900004
Tumor
-0.5
CPT0075570001
Normal
-0.5
CPT0012920003
Normal
-0.5
CPT0017450001
Normal
-0.5
CPT0002270011
Tumor
-0.5
CPT0089480003
Normal
-0.5
CPT0063640001
Normal
-0.5
CPT0077490003
Tumor
-0.5
CPT0092800003
Normal
-0.6
CPT0077500001
Normal
-0.6
CPT0078940001
Normal
-0.6
CPT0001550001
Normal
-0.6
CPT0069190001
Normal
-0.7
CPT0009020003
Normal
-0.7
CPT0087050003
Normal
-0.7
CPT0023710001
Normal
-0.7
CPT0012090003
Normal
-0.8
CPT0010120001
Normal
-0.8
CPT0014450004
Tumor
-0.8
CPT0077140001
Normal
-0.8
CPT0006950001
Normal
-0.8
CPT0078840001
Normal
-0.8
CPT0007320003
Tumor
-0.8
CPT0014350001
Normal
-0.8
CPT0076350001
Normal
-0.8
CPT0000790001
Normal
-0.9
CPT0019160001
Normal
-1.0
CPT0009080003
Normal
-1.0
CPT0012080003
Tumor
-1.0
CPT0079430001
Normal
-1.0
CPT0079000001
Normal
-1.0
CPT0065450001
Normal
-1.0
CPT0088920001
Normal
-1.1
CPT0084560003
Tumor
-1.1
CPT0088640003
Normal
-1.2
CPT0069010001
Normal
-1.2
CPT0086830003
Normal
-1.4
CPT0079300001
Normal
-1.4
CPT0012640003
Normal
-1.4
CPT0006730001
Normal
-1.6
CPT0007870001
Normal
-1.7
CPT0025920001
Normal
-1.9
CPT0092740003
Normal
-2.0
CPT0007470001
Normal
-2.0
CPT0000640003
Tumor
-2.4
CPT0026410003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0064370003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0092190003
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0019990003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088500001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0086950003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0001190001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0086030003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0010160003
Tumor
N/A
CPT0015730003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
