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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
QTRT1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
21.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
55.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
52.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
52.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
52.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
52.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
50.8
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
50.5
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
49.7
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
49.7
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
48.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
47.3
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
46.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
46.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
45.1
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
42.9
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
42.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
41.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
41.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
40.8
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
40.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
40.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
39.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
39.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
39.2
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
38.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
37.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
36.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
36.8
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
36.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
36.4
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
36.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
35.9
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
35.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
35.5
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
35.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
35.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
34.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
34.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
34.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
34.5
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
33.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
33.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
33.4
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
33.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
33.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
32.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
32.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
32.7
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
32.7
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
32.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
32.4
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
32.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
32.1
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
31.6
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
31.6
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
30.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
30.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
30.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
30.7
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
30.4
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
29.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
29.6
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
29.4
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
29.2
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
29.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
29.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
28.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
28.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
28.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
28.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
28.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
28.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
27.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
27.7
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
27.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
27.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
27.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
27.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
27.5
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
27.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
27.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
27.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
27.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
27.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
26.9
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
26.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
26.6
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
26.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
26.5
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
26.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
26.4
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
26.3
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
26.3
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
26.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
26.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
26.1
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
26.1
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
26.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
26.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
25.7
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
25.7
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
25.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
25.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
25.5
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
25.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
25.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
25.2
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
25.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
25.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
25.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
25.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
25.0
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
24.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
24.9
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
24.8
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
24.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
24.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
24.4
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
24.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
24.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
23.8
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
23.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
23.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
23.6
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
23.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
23.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
23.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
23.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
23.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
23.3
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
23.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
23.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
22.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
22.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
22.6
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
22.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
22.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
22.5
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
22.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
22.5
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
22.5
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
22.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
22.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
22.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
22.1
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
22.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
21.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
21.9
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
21.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
21.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
21.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
21.6
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
21.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
21.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
21.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
21.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
21.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
21.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
21.3
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
21.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
21.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
21.2
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
21.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
21.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
21.1
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
21.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
21.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
20.9
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
20.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
20.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
20.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
20.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
20.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
20.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
20.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
20.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
20.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
20.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
20.2
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
20.2
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
20.1
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
20.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
20.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
20.0
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
20.0
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
19.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
19.9
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
19.8
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
19.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
19.8
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
19.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
19.6
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
19.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
19.5
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
19.4
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
19.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
19.4
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
19.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
19.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
19.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
19.3
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
19.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
19.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
19.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
19.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
19.0
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
18.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
18.9
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
18.6
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
18.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
18.4
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
18.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
18.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
18.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
18.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
18.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
18.1
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
18.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
17.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
17.8
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
17.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
17.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
17.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
17.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
17.7
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
17.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
17.6
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
17.5
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
17.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
17.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
17.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
17.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
17.3
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
17.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
17.3
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
17.3
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
17.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
17.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
17.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
17.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
17.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
17.0
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
17.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
17.0
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
17.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
17.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
16.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
16.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
16.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
16.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
16.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
16.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
16.7
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
16.6
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
16.6
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
16.6
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
16.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
16.4
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
16.4
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
16.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
16.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
16.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
15.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
15.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
15.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
15.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
15.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
15.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
15.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
15.7
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
15.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
15.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
15.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
15.4
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
15.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
15.2
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
15.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
14.9
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
14.9
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
14.9
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
14.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
14.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
14.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
14.7
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
14.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
14.7
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
14.6
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
14.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
14.3
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
14.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
14.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
13.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
13.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
13.7
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
13.7
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
13.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
13.5
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
13.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
13.3
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
13.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
13.1
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
13.1
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
13.1
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
13.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
12.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
12.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
12.8
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
12.8
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
12.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
12.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
12.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
12.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
12.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
12.2
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
12.2
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
12.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
12.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
12.0
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
11.8
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
11.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
11.5
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
11.4
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
11.4
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
11.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
11.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
11.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
11.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
10.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
10.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
10.2
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
10.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
10.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
9.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
9.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
9.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
9.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
9.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
9.1
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
9.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
9.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
8.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
8.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.4
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
8.4
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
7.6
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
7.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
6.4
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
6.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
5.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
5.5
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
QTRT1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.5
Number of samples
231
Samples
Sample
Description
TPM
DO45149
0 years, female, NA, stage:2, alive, 1260 days
118.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
116.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
102.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
96.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
94.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
92.4
DO50845
0 years, male, NA, stage:3, alive, 210 days
82.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
82.7
DO23547
0 years, male, NA, stage:1, alive, 1020 days
74.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
73.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
71.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
70.5
DO45209
0 years, male, NA, stage:4, alive, 1350 days
69.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
68.3
DO23516
0 years, male, NA, stage:3, dead, 20 days
67.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
65.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
60.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
59.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
59.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
59.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
56.2
DO50839
0 years, female, NA, stage:3, alive, 330 days
55.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
55.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
54.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
53.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
51.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
50.3
DO45199
0 years, female, NA, stage:2, alive, 1350 days
49.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
49.5
DO23519
0 years, male, NA, stage:3, alive, 630 days
48.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
48.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
47.9
DO48732
0 years, male, NA, stage:3, alive, 630 days
47.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
47.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
47.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
46.7
DO50802
0 years, male, NA, stage:2, alive, 930 days
46.5
DO45107
0 years, female, NA, stage:2, alive, 1710 days
46.2
DO48737
0 years, male, NA, stage:1, alive, 720 days
45.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
45.2
DO23525
0 years, male, NA, stage:4, alive, 1050 days
45.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
44.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
43.4
DO50783
0 years, male, NA, stage:3, alive, 480 days
43.2
DO50811
0 years, male, NA, stage:1, alive, 450 days
42.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
42.7
DO48730
0 years, female, NA, stage:2, alive, 630 days
42.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
42.3
DO48697
0 years, female, NA, stage:2, dead, 810 days
41.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
41.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
41.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
41.4
DO50859
0 years, male, NA, stage:2, alive, 180 days
41.4
DO50791
0 years, female, NA, stage:1, dead, 480 days
41.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
41.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
41.1
DO45285
0 years, male, NA, stage:3, alive, 480 days
41.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
40.3
DO23540
0 years, male, NA, stage:1, alive, 750 days
40.2
DO45283
0 years, male, NA, stage:3, alive, 510 days
39.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
39.6
DO45143
0 years, male, NA, stage:3, alive, 1290 days
39.5
DO23515
0 years, male, NA, stage:2, alive, 1230 days
39.2
DO45095
0 years, male, NA, stage:2, alive, 1620 days
38.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
38.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
38.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
37.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
37.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
37.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
37.2
DO48715
0 years, female, NA, stage:2, dead, 690 days
36.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
36.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
36.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
36.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
36.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
36.1
DO48727
0 years, female, NA, stage:2, dead, 390 days
35.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
35.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
35.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
34.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
34.9
DO48679
0 years, male, NA, stage:2, alive, 1200 days
34.8
DO50776
0 years, male, NA, stage:1, alive, 690 days
34.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
34.0
DO45163
0 years, male, NA, stage:2, alive, 960 days
34.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
33.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
33.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
33.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
33.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
33.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
33.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
33.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
33.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
32.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
32.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
32.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
32.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
32.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
32.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
31.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
30.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
30.1
DO45275
0 years, male, NA, stage:3, dead, 10 days
30.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
30.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
29.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
29.6
DO227801
0 years, female, NA, stage:1, alive, 660 days
29.2
DO50822
0 years, male, NA, stage:2, alive, 510 days
29.1
DO23523
0 years, male, NA, stage:3, alive, 1080 days
28.8
DO23513
0 years, male, NA, stage:3, alive, 1200 days
28.7
DO23510
0 years, female, NA, stage:2, alive, 870 days
28.4
DO45277
0 years, male, NA, stage:3, alive, 600 days
28.1
DO45231
0 years, male, NA, stage:2, alive, 930 days
28.0
DO45261
0 years, male, NA, stage:3, alive, 990 days
27.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
27.8
DO23535
0 years, male, NA, stage:1, alive, 960 days
27.7
DO45243
0 years, female, NA, stage:3, alive, 930 days
27.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
27.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
27.2
DO45217
0 years, female, NA, stage:3, dead, 270 days
27.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
27.1
DO45157
0 years, male, NA, stage:2, alive, 1980 days
26.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
26.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
26.4
DO23517
0 years, male, NA, stage:2, alive, 1200 days
26.3
DO45099
0 years, male, NA, stage:3, alive, 1590 days
26.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
25.9
DO48746
0 years, male, NA, stage:3, alive, 570 days
25.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
25.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
25.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
25.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
25.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
25.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
24.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
24.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
24.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
24.4
DO45094
0 years, male, NA, stage:3, alive, 1650 days
24.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
24.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
24.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
24.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
24.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
23.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
23.7
DO45139
0 years, male, NA, stage:3, alive, 1320 days
23.6
DO45185
0 years, male, NA, stage:2, alive, 600 days
23.5
DO50800
0 years, male, NA, stage:2, alive, 510 days
23.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
23.3
DO227643
0 years, male, NA, stage:2, alive, 1260 days
23.2
DO45096
0 years, male, NA, stage:2, dead, 1290 days
23.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
23.1
DO48757
0 years, female, NA, stage:3, alive, 480 days
23.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
22.9
DO45207
0 years, male, NA, stage:1, alive, 1050 days
22.5
DO48720
0 years, female, NA, stage:2, alive, 570 days
22.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
22.4
DO23524
0 years, female, NA, stage:2, alive, 1050 days
22.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
22.3
DO48674
0 years, male, NA, stage:2, alive, 1260 days
22.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
22.2
DO45205
0 years, female, NA, stage:2, dead, 90 days
22.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
22.1
DO23544
0 years, male, NA, stage:2, alive, 960 days
21.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
21.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
21.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
21.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
21.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
21.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
21.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
20.7
DO45175
0 years, male, NA, stage:2, alive, 1140 days
20.6
DO45187
0 years, female, NA, stage:1, alive, 1260 days
20.6
DO45245
0 years, female, NA, stage:2, dead, 240 days
20.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
20.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
20.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
20.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
20.0
DO45223
0 years, male, NA, stage:4, alive, 1020 days
19.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
19.5
DO45211
0 years, male, NA, stage:3, alive, 240 days
19.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
19.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
19.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
19.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
18.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
18.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
18.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
18.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
17.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
17.1
DO45233
0 years, male, NA, stage:3, alive, 900 days
17.0
DO45173
0 years, male, NA, stage:3, alive, 1170 days
16.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
16.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
16.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
16.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
16.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
16.1
DO45092
0 years, male, NA, stage:4, dead, 1200 days
15.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
15.8
DO48743
0 years, female, NA, stage:2, alive, 570 days
15.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
15.2
DO48723
0 years, male, NA, stage:1, alive, 600 days
15.1
DO23509
0 years, male, NA, stage:3, dead, 780 days
14.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
14.8
DO45137
0 years, male, NA, stage:1, alive, 1320 days
14.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
14.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
14.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
14.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
13.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
13.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
13.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
13.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
13.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
13.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
13.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
13.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
13.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
12.6
DO45203
0 years, female, NA, stage:2, alive, 1170 days
12.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.1
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.9
DO23551
0 years, male, NA, stage:3, dead, 150 days
11.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
11.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
11.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
11.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
9.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
9.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
8.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
8.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
6.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
285
Tumor
1.1
567
Tumor
1.1
815
Tumor
1.0
123
Tumor
0.7
685
Tumor
0.7
223
Tumor
0.6
331
Tumor
0.6
473
Tumor
0.6
463
Tumor
0.5
1041
Tumor
0.5
131
Tumor
0.5
363
Tumor
0.5
865
Tumor
0.5
715
Tumor
0.4
221
Tumor
0.4
813
Tumor
0.4
983
Tumor
0.4
471
Tumor
0.4
431
Tumor
0.4
171
Tumor
0.4
663
Tumor
0.4
911
Tumor
0.4
365
Tumor
0.3
445
Tumor
0.3
513
Tumor
0.3
137
Tumor
0.3
227
Tumor
0.3
353
Tumor
0.3
737
Tumor
0.3
267
Tumor
0.3
873
Tumor
0.3
342
Normal
0.3
881
Tumor
0.3
867
Tumor
0.3
1031
Tumor
0.3
523
Tumor
0.3
1042
Normal
0.2
746
Normal
0.2
515
Tumor
0.2
564
Normal
0.2
741
Tumor
0.2
356
Normal
0.2
915
Tumor
0.2
1045
Tumor
0.2
186
Normal
0.2
913
Tumor
0.2
818
Normal
0.2
393
Tumor
0.2
364
Normal
0.2
465
Tumor
0.2
443
Tumor
0.2
851
Tumor
0.2
967
Tumor
0.2
412
Normal
0.2
482
Normal
0.2
568
Normal
0.2
883
Tumor
0.2
416
Normal
0.2
918
Normal
0.2
952
Normal
0.2
432
Normal
0.2
571
Tumor
0.2
358
Normal
0.2
351
Tumor
0.2
664
Normal
0.2
1046
Normal
0.2
527
Tumor
0.2
648
Normal
0.2
354
Normal
0.2
636
Normal
0.2
1026
Normal
0.2
1015
Tumor
0.2
557
Tumor
0.2
824
Normal
0.2
852
Normal
0.2
1016
Normal
0.1
627
Tumor
0.1
921
Tumor
0.1
376
Normal
0.1
1021
Tumor
0.1
132
Normal
0.1
261
Tumor
0.1
327
Tumor
0.1
413
Tumor
0.1
695
Tumor
0.1
723
Tumor
0.1
411
Tumor
0.1
447
Tumor
0.1
572
Normal
0.1
742
Normal
0.1
738
Normal
0.1
277
Tumor
0.1
982
Normal
0.1
461
Tumor
0.1
452
Normal
0.1
472
Normal
0.1
1043
Tumor
0.1
755
Tumor
0.1
698
Normal
0.1
574
Normal
0.1
222
Normal
0.1
618
Normal
0.1
426
Normal
0.1
862
Normal
0.1
481
Tumor
0.1
616
Normal
0.1
228
Normal
0.1
951
Tumor
0.1
456
Normal
0.1
298
Normal
0.1
912
Normal
0.1
196
Normal
0.1
112
Tumor
0.1
953
Tumor
0.1
136
Normal
0.1
814
Normal
0.1
1022
Normal
0.1
464
Normal
0.1
666
Normal
0.1
124
Normal
0.1
187
Tumor
0.1
917
Tumor
0.1
415
Tumor
0.1
392
Normal
0.1
926
Normal
0.1
328
Normal
0.1
984
Normal
0.1
355
Tumor
0.1
332
Normal
0.1
756
Normal
0.1
146
Normal
0.1
278
Normal
0.1
191
Tumor
0.1
451
Tumor
0.1
212
Normal
0.1
938
Normal
0.1
662
Normal
0.1
922
Normal
0.1
665
Tumor
0.1
162
Normal
0.1
422
Normal
0.1
286
Normal
0.1
217
Tumor
0.1
361
Tumor
0.1
423
Tumor
0.0
487
Tumor
0.0
546
Normal
0.0
172
Normal
0.0
147
Tumor
0.0
964
Normal
0.0
858
Normal
0.0
436
Normal
0.0
528
Normal
0.0
366
Normal
0.0
1044
Normal
0.0
1032
Normal
0.0
615
Tumor
0.0
368
Normal
0.0
424
Normal
0.0
468
Normal
0.0
956
Normal
0.0
877
Tumor
0.0
563
Tumor
0.0
884
Normal
0.0
744
Normal
0.0
866
Normal
0.0
467
Tumor
0.0
138
Normal
0.0
617
Tumor
0.0
414
Normal
0.0
231
Tumor
0.0
218
Normal
0.0
558
Normal
0.0
383
Tumor
0.0
874
Normal
0.0
362
Normal
0.0
981
Tumor
0.0
448
Normal
0.0
211
Tumor
0.0
978
Normal
0.0
642
Normal
0.0
1028
Normal
0.0
145
Tumor
0.0
271
Tumor
0.0
224
Normal
0.0
352
Normal
0.0
113
Tumor
0.0
882
Normal
0.0
778
Normal
0.0
785
Tumor
0.0
545
Tumor
0.0
344
Normal
0.0
312
Normal
0.0
395
Tumor
0.0
142
Normal
0.0
786
Normal
0.0
641
Tumor
0.0
357
Tumor
0.0
955
Tumor
0.0
1014
Normal
0.0
716
Normal
0.0
745
Tumor
0.0
388
Normal
0.0
916
Normal
0.0
777
Tumor
0.0
537
Tumor
0.0
284
Normal
0.0
455
Tumor
0.0
214
Normal
0.0
976
Normal
0.0
462
Normal
0.0
722
Normal
0.0
728
Normal
-0.1
433
Tumor
-0.1
977
Tumor
-0.1
878
Normal
-0.1
466
Normal
-0.1
192
Normal
-0.1
478
Normal
-0.1
517
Tumor
-0.1
864
Normal
-0.1
727
Tumor
-0.1
148
Normal
-0.1
195
Tumor
-0.1
628
Normal
-0.1
535
Tumor
-0.1
474
Normal
-0.1
966
Normal
-0.1
114
Normal
-0.1
944
Normal
-0.1
394
Normal
-0.1
696
Normal
-0.1
721
Tumor
-0.1
262
Normal
-0.1
314
Normal
-0.1
536
Normal
-0.1
714
Normal
-0.1
258
Normal
-0.1
311
Tumor
-0.1
483
Tumor
-0.1
965
Tumor
-0.1
863
Tumor
-0.1
272
Normal
-0.1
533
Tumor
-0.1
435
Tumor
-0.1
1027
Tumor
-0.1
924
Normal
-0.1
497
Tumor
-0.1
446
Normal
-0.1
1013
Tumor
-0.1
125
Tumor
-0.1
516
Normal
-0.1
444
Normal
-0.1
375
Tumor
-0.1
686
Normal
-0.1
553
Tumor
-0.1
514
Normal
-0.1
428
Normal
-0.1
434
Normal
-0.1
488
Normal
-0.1
647
Tumor
-0.1
384
Normal
-0.1
518
Normal
-0.1
954
Normal
-0.1
385
Tumor
-0.1
526
Normal
-0.1
386
Normal
-0.1
141
Tumor
-0.1
868
Normal
-0.1
661
Tumor
-0.1
538
Normal
-0.1
421
Tumor
-0.2
534
Normal
-0.2
185
Tumor
-0.2
111
Normal
-0.2
816
Normal
-0.2
367
Tumor
-0.2
188
Normal
-0.2
493
Tumor
-0.2
943
Tumor
-0.2
861
Tumor
-0.2
297
Tumor
-0.2
494
Normal
-0.2
127
Tumor
-0.2
387
Tumor
-0.2
128
Normal
-0.2
923
Tumor
-0.2
914
Normal
-0.2
1025
Tumor
-0.2
968
Normal
-0.2
963
Tumor
-0.2
672
Normal
-0.2
937
Tumor
-0.2
126
Normal
-0.2
958
Normal
-0.2
975
Tumor
-0.2
396
Normal
-0.2
427
Tumor
-0.2
425
Tumor
-0.2
857
Tumor
-0.2
554
Normal
-0.3
313
Tumor
-0.3
257
Tumor
-0.3
283
Tumor
-0.3
484
Normal
-0.3
391
Tumor
-0.3
713
Tumor
-0.3
823
Tumor
-0.3
491
Tumor
-0.3
232
Normal
-0.3
492
Normal
-0.3
697
Tumor
-0.3
573
Tumor
-0.3
925
Tumor
-0.3
498
Normal
-0.3
135
Tumor
-0.3
524
Normal
-0.4
724
Normal
-0.4
213
Tumor
-0.4
477
Tumor
-0.4
268
Normal
-0.4
957
Tumor
-0.4
671
Tumor
-0.4
341
Tumor
-0.4
161
Tumor
-0.5
525
Tumor
-0.5
343
Tumor
-0.5
743
Tumor
-0.5
635
Tumor
-0.7
817
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
