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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HPA Brain:
1.0
nTPM
FANTOM5:
0.0
Scaled Tags Per Million
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
1.0
Sample id
Sample description
nTPM
Amygdala nTPM: 0.7
2514
Male, age 75, right hemisphere
0.9
2517
Female, age 94, left hemisphere
0.8
2695
Female, age 67, right hemisphere
0.7
2814
Male, age 76, right hemisphere
0.7
1987
Female, age 91, left hemisphere
0.3
Basal amygdala nTPM: 0.8
2110
Male, age 80, left hemisphere
1.1
2827
Female, age 67, right hemisphere
1.1
2685
Female, age 94, left hemisphere
0.9
2609
Male, age 75, right hemisphere
0.8
1955
Male, age 76, both hemispheres
0.7
2243
Female, age 91, right hemisphere
0.1
Central amygdala nTPM: 0.9
2826
Female, age 94, left hemisphere
1.6
2239
Male, age 80, left hemisphere
1.0
1905
Male, age 76, both hemispheres
0.7
2515
Male, age 75, right hemisphere
0.6
2701
Female, age 91, right hemisphere
0.5
Corticomedial amygdala nTPM: 0.7
2240
Male, age 76, both hemispheres
1.0
2829
Male, age 80, left hemisphere
0.9
2429
Female, age 94, left hemisphere
0.8
2428
Male, age 75, right hemisphere
0.7
2535
Female, age 67, right hemisphere
0.7
2242
Female, age 91, right hemisphere
0.0
Lateral amygdala nTPM: 1.0
2534
Female, age 94, left hemisphere
1.6
2830
Female, age 67, right hemisphere
1.6
2516
Male, age 75, right hemisphere
0.9
1883
Male, age 76, both hemispheres
0.8
2256
Male, age 80, left hemisphere
0.8
2255
Female, age 91, right hemisphere
0.4
AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
The Human Protein Atlas project is funded
