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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGLC3 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
37.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
622.5
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
561.0
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
204.7
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
161.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
121.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
80.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
76.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
67.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
53.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
44.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
38.2
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
29.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
29.3
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
18.4
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
17.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
17.5
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
16.5
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
15.4
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
14.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
12.7
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
11.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
10.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
10.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
10.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
9.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.4
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
7.3
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
7.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
6.8
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
4.7
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
4.7
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
3.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
3.0
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
2.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
1.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
1.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
1.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.8
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.8
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.7
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.6
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.5
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.3
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.2
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.1
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.1
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGLC3 is potential prognostic, high expression is unfavorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
953.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
82669.8
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
37098.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
36129.3
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
25013.9
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
18246.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
16894.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
12994.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
12386.6
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
11321.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
6034.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5833.1
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
5606.3
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
5560.7
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
5555.9
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
5348.3
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
4894.3
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
4422.1
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
4258.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
3813.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
3767.4
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
3665.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
3404.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
3341.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
3213.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
3038.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
2863.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
2820.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
2735.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
2734.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
2712.4
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2647.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
2611.7
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
2596.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
2585.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
2541.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
2482.3
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
2147.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
2132.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
2087.0
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
2040.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
2034.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
1959.9
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
1851.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
1810.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
1807.1
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
1721.9
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
1633.1
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
1620.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
1610.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
1580.0
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
1559.2
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
1517.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
1422.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
1395.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
1381.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
1354.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
1301.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
1300.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
1229.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
1218.8
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
1214.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
1206.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
1202.2
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
1170.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
1163.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
1146.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
1113.5
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
1091.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
1063.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
1020.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
996.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
992.6
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
981.7
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
975.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
971.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
955.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
953.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
943.6
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
936.8
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
934.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
924.7
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
922.8
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
919.6
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
905.6
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
851.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
849.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
827.3
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
817.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
817.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
808.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
802.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
797.1
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
794.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
790.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
781.9
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
769.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
748.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
743.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
725.3
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
724.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
714.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
711.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
681.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
674.1
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
659.6
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
653.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
651.9
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
637.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
627.6
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
619.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
608.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
592.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
591.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
590.3
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
586.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
579.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
571.1
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
568.1
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
565.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
560.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
558.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
555.6
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
552.5
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
549.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
548.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
544.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
537.0
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
535.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
533.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
527.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
517.3
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
501.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
484.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
478.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
462.0
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
452.2
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
452.1
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
451.6
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
451.0
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
441.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
420.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
419.2
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
419.1
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
418.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
400.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
400.1
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
394.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
393.5
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
383.7
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
379.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
377.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
374.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
365.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
360.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
357.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
352.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
352.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
340.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
337.1
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
331.4
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
328.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
327.9
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
327.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
325.7
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
320.7
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
319.0
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
318.6
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
317.3
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
314.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
311.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
307.7
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
297.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
295.2
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
287.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
286.6
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
280.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
277.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
276.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
275.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
274.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
272.8
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
266.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
264.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
263.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
262.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
261.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
261.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
260.6
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
254.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
250.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
249.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
249.0
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
249.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
247.2
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
245.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
236.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
236.5
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
234.8
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
231.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
231.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
231.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
229.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
229.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
228.9
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
224.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
223.9
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
221.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
218.1
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
217.0
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
210.4
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
210.1
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
208.5
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
207.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
207.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
202.2
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
190.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
189.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
189.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
185.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
184.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
183.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
182.9
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
182.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
176.5
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
174.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
173.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
172.8
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
171.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
169.8
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
167.0
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
166.0
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
160.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
159.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
158.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
157.4
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
157.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
156.5
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
156.5
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
155.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
155.0
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
154.2
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
153.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
153.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
153.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
149.5
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
149.2
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
147.6
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
144.3
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
143.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
141.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
141.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
140.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
139.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
139.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
137.9
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
136.1
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
135.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
133.4
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
132.9
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
132.2
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
132.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
130.6
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
129.9
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
129.7
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
128.6
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
127.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
127.0
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
126.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
126.7
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
125.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
119.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
113.7
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
113.5
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
110.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
110.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
110.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
109.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
109.0
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
107.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
107.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
106.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
106.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
106.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
106.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
105.4
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
105.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
104.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
104.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
103.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
102.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
102.5
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
101.1
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
100.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
100.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
99.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
99.5
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
99.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
98.9
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
98.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
98.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
96.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
94.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
94.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
94.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
94.0
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
94.0
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
93.8
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
93.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
93.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
92.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
92.3
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
89.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
89.1
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
88.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
88.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
87.4
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
87.3
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
87.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
86.8
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
86.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
86.0
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
84.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
84.8
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
84.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
84.3
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
84.0
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
82.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
78.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
78.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
78.5
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
78.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
77.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
77.7
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
77.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
77.5
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
75.9
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
75.8
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
75.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
74.6
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
73.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
72.3
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
72.0
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
71.4
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
71.1
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
70.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
70.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
69.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
67.9
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
66.0
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
65.7
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
65.2
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
65.2
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
64.7
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
64.1
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
63.9
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
63.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
63.3
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
62.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
62.9
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
62.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
62.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
62.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
61.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
60.8
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
60.5
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
59.6
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
59.5
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
59.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
59.2
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
58.6
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
58.6
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
57.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
57.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
56.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
56.8
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
56.5
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
56.0
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
55.8
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
55.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
55.2
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
54.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
54.9
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
54.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
53.7
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
53.6
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
53.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
52.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
51.4
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
50.7
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
50.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
50.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
50.0
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
48.7
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
48.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
48.3
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
48.0
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
47.8
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
46.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
46.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
46.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
45.8
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
45.3
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
45.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
44.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
44.6
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
44.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
43.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
42.8
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
42.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
42.0
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
41.8
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
41.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
41.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
41.3
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
41.2
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
40.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
40.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
39.8
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
39.1
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
39.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
39.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
38.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
37.8
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
37.7
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
36.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
36.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
36.0
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
35.6
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
35.5
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
35.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
35.3
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
32.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
32.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
31.9
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
31.6
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.9
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
30.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
30.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
29.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
28.8
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
28.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
28.3
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
27.8
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
27.5
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
27.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
26.6
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
25.9
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
25.8
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
25.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
25.2
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
25.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
24.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
23.6
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
23.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
23.1
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
23.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.9
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
22.8
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
22.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
22.3
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
21.8
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
21.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
20.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
20.5
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
20.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
19.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
18.8
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
18.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
18.5
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
18.2
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
17.6
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
17.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
16.6
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
16.1
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
15.8
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
15.5
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
14.6
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
14.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
14.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
14.0
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
13.7
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.6
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
13.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
13.2
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
12.2
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
12.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
12.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
11.9
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
11.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.1
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.0
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
9.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
9.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
7.5
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
7.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
7.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
6.4
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
6.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
5.5
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
5.3
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
5.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
5.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
4.8
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
4.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
3.9
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
3.1
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
2.0
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
1.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
1.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
1.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGLC3 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
375.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
7244.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
5775.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
3442.0
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
1847.4
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
1166.6
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
1022.6
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
998.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
923.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
913.9
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
768.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
634.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
618.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
615.3
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
598.7
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
549.5
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
503.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
444.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
434.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
429.6
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
408.3
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
403.0
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
334.7
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
326.1
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
321.5
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
317.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
317.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
302.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
282.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
274.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
245.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
233.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
231.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
215.2
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
211.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
207.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
205.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
203.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
186.4
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
175.0
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
172.3
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
147.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
145.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
140.8
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
140.1
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
139.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
130.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
126.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
115.7
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
115.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
110.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
109.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
106.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
100.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
99.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
94.2
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
93.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
76.5
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
73.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
55.9
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
53.1
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
52.2
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
47.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
44.8
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
39.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
38.5
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
37.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
36.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
35.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
35.1
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
34.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
34.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
33.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
31.7
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
31.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
30.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
28.9
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
27.3
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
24.4
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
24.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
21.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
21.2
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
20.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
19.8
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
18.6
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
18.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
15.7
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
14.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
13.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
10.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
9.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
8.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
6.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
5.3
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
4.8
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
4.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
3.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
1.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGLC3 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
399.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
24022.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
10240.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7954.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
6932.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
4758.0
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
3776.1
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
3529.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
3187.7
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
2960.9
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
2644.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
2603.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
1881.3
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
1843.6
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
1715.1
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
1272.0
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
1245.2
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
1238.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
1216.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1112.6
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
1059.4
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
1058.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
1010.0
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
964.2
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
922.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
916.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
847.8
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
838.8
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
796.8
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
794.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
784.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
740.6
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
729.6
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
720.8
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
542.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
535.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
533.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
471.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
413.2
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
387.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
360.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
335.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
329.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
328.8
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
304.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
293.6
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
288.2
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
283.1
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
272.5
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
272.2
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
253.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
252.6
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
237.9
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
234.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
223.9
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
223.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
221.9
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
219.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
207.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
203.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
203.4
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
197.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
193.7
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
192.1
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
185.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
180.9
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
174.4
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
172.0
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
167.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
164.1
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
159.6
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
151.6
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
146.6
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
142.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
131.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
129.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
126.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
124.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
123.8
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
122.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
120.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
117.6
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
117.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
116.9
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
116.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
114.7
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
106.2
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
106.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
102.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
101.6
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
94.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
92.6
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
87.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
87.2
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
83.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
81.8
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
81.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
78.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
68.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
64.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
64.4
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
63.6
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
60.3
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
59.9
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
58.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
57.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
53.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
50.9
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
49.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
48.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
48.7
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
46.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
45.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
45.5
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
45.5
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
43.9
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
42.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
42.3
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
41.8
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
40.5
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
40.4
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
40.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
39.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
39.4
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
38.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
38.1
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
36.2
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
36.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
35.8
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
33.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
33.3
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
33.2
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
33.1
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
32.9
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
32.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
32.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
32.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
30.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
28.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
28.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
27.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
26.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
26.3
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
25.7
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
25.2
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
24.4
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
24.3
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
23.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
23.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
23.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
22.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
21.7
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
21.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
21.6
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
20.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
19.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
18.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
18.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
18.3
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
17.7
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
17.5
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
17.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
17.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
16.5
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
16.1
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
16.1
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
15.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
15.6
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
14.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
13.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
13.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
12.4
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
11.7
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
11.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
11.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
10.9
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
10.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
10.7
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
10.6
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
10.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
10.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.3
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
10.2
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
10.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
9.9
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
9.9
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.7
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
9.4
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
9.4
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
9.4
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
9.0
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
8.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
8.8
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
8.7
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
8.7
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
8.5
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
8.4
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
8.3
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
8.2
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
8.1
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
8.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
7.7
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
7.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
7.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
7.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.0
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
6.8
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
6.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
6.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
6.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
6.0
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
5.9
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
5.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
5.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
5.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
5.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
5.5
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
5.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
5.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
5.0
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
5.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.9
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
4.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
4.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
4.2
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
4.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
3.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
3.6
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
3.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
3.4
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
3.4
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
3.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
3.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
3.0
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
3.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
2.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
2.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
2.3
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
2.1
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
2.1
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
1.9
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
1.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
1.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
1.3
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
1.3
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
0.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
0.7
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
0.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.6
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
0.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
0.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.3
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
0.2
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
