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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGLV3-25 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.3
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
317.3
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
100.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
54.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
26.1
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
18.8
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
11.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
10.7
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
9.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
8.4
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
7.4
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
6.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
6.0
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
2.2
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
1.8
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
1.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
1.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
1.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
1.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
1.1
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.1
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.0
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
0.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.6
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.5
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.5
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
0.4
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.4
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
0.4
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.2
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
0.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.2
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.1
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.1
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.1
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.1
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.1
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGLV3-25 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
76.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6421.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
1889.8
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
1772.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
1400.5
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
1311.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
943.2
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
822.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
738.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
705.2
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
541.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
517.6
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
493.0
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
489.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
449.8
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
445.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
412.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
407.2
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
374.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
317.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
311.8
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
308.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
285.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
282.4
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
275.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
275.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
270.2
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
265.4
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
263.3
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
258.0
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
258.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
255.0
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
251.9
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
251.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
226.2
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
217.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
213.6
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
210.0
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
202.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
201.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
197.9
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
192.0
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
190.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
187.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
180.7
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
177.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
174.6
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
168.8
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
166.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
166.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
157.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
155.4
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
151.0
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
150.8
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
147.6
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
147.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
146.8
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
146.1
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
144.9
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
141.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
140.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
136.9
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
136.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
135.5
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
128.4
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
125.8
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
122.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
119.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
118.6
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
116.9
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
116.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
114.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
112.6
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
111.2
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
106.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
106.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
106.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
104.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
104.0
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
99.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
98.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
97.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
96.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
95.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
93.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
92.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
88.4
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
87.2
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
86.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
85.4
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
84.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
82.2
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
80.0
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
79.7
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
79.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
78.1
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
76.6
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
73.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
73.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
70.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
70.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
69.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
67.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
67.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
67.6
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
66.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
66.0
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
63.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
62.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
61.9
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
61.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
60.6
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
60.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
59.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
59.8
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
59.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
58.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
57.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
57.2
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
56.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
56.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
55.2
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
55.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
53.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
53.3
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
53.2
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
50.5
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
50.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
49.7
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
49.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
48.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
48.9
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
48.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
48.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
48.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
47.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
47.0
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
46.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
45.4
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
45.3
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
45.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
44.5
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
44.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
43.7
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
43.1
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
42.9
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
41.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
40.2
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
38.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
38.7
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
38.2
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
37.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
37.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
36.8
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
36.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
36.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
36.1
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
35.9
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
35.8
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
35.6
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
35.1
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
35.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
34.0
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
33.8
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
33.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
33.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
33.1
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
32.6
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
32.3
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
31.9
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
31.9
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
31.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
31.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
31.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
31.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
31.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
31.0
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
30.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
30.4
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
30.4
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
30.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
30.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
29.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
29.2
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
29.0
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
28.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
28.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
28.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
27.6
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
27.4
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
27.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
27.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
27.2
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
27.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
26.5
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
26.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
26.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
26.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
25.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
25.0
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
24.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
24.4
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
24.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
23.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
23.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
23.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
22.7
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
22.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
22.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
22.5
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
21.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
21.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
21.6
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
21.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.6
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
21.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
21.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
20.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
20.8
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
20.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
20.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
20.3
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
20.0
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
19.9
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
19.8
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
19.8
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
19.8
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
19.6
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
19.5
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
19.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
19.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
19.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
19.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
18.8
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
18.6
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
18.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
17.8
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
17.8
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.7
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
16.8
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
16.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
16.6
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
16.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
16.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
16.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
16.0
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
15.5
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
15.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
15.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
15.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
15.0
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
14.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
14.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
14.7
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
14.7
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
14.7
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
14.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
14.5
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
14.4
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
14.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
14.1
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
14.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
14.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
14.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
13.8
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
13.6
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
13.5
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
13.4
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
12.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
12.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
12.7
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
12.6
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
12.5
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.3
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
12.2
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
12.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
12.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
12.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
11.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
11.8
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
11.7
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.4
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
11.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
11.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
11.1
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
11.0
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
10.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
10.8
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
10.6
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
10.5
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
10.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.4
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
10.3
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.3
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.2
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
10.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
10.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
9.6
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
9.5
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
9.5
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.5
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
9.5
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
9.4
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
9.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
9.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.0
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
9.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
8.9
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
8.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
8.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
8.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
8.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
8.4
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
8.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
8.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.3
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
8.3
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
8.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
8.1
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.1
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
8.0
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
7.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
7.7
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.6
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
7.5
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
7.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
7.4
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.4
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
7.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
7.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
7.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
7.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
7.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
6.9
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
6.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
6.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
6.6
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
6.5
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
6.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
6.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
6.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
6.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
6.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
6.0
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
5.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
5.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
5.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
5.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
5.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
5.6
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
5.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
5.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
5.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
5.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
5.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
5.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
5.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
4.9
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
4.9
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
4.8
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
4.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
4.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
4.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
4.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
4.7
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
4.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.6
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
4.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
4.6
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
4.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
4.4
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
4.4
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
4.4
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
4.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
4.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
4.4
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
4.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
4.3
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
4.3
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
4.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
4.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
4.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
4.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
4.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
4.0
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
3.9
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
3.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
3.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
3.9
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
3.7
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
3.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
3.7
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
3.6
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
3.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
3.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
3.5
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
3.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
3.4
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
3.3
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
3.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
3.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
3.1
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
3.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
3.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
3.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
2.9
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
2.9
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
2.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
2.8
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
2.8
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
2.7
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
2.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
2.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
2.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
2.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
2.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
2.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
2.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
2.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
2.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
2.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
2.1
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
2.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
2.1
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
2.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
2.0
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
2.0
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
2.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
2.0
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
2.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
1.9
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
1.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
1.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
1.8
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
1.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
1.8
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
1.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
1.7
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
1.7
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
1.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
1.7
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
1.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
1.7
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
1.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
1.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
1.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
1.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
1.5
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
1.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
1.5
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
1.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
1.4
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
1.4
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
1.4
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
1.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
1.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
1.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
1.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
1.3
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
1.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
1.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
1.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
1.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
1.2
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
1.2
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
1.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
1.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
1.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
1.1
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
0.9
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
0.8
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
0.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.7
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
0.7
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
0.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
0.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
0.5
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
0.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
0.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
0.4
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
0.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
0.3
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
0.3
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
0.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
0.3
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.3
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
0.2
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
0.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
0.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
0.2
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
0.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
0.1
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
0.1
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
0.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
0.0
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGLV3-25 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
102.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
2593.8
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
1510.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
859.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
691.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
530.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
474.9
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
310.1
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
294.1
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
198.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
183.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
134.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
126.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
125.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
112.0
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
111.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
94.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
86.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
80.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
79.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
77.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
74.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
69.4
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
65.4
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
64.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
61.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
60.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
56.4
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
53.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
51.2
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
50.1
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
48.5
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
43.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
42.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
40.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
39.6
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
37.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
37.6
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
33.4
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
31.7
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
30.5
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
28.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
28.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
27.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
26.3
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
24.3
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
24.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.2
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
19.5
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
17.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
17.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
16.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
16.8
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.6
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
15.8
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.7
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
14.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
13.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
13.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
13.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
13.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
12.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
11.8
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
11.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
11.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
10.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
10.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
10.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
9.7
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
9.1
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
8.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
7.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
7.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
7.0
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
6.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
6.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
6.0
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
5.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
5.6
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
5.5
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
4.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
4.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
4.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
4.2
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
3.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
3.9
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
3.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
3.1
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
2.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
1.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
1.5
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
1.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
1.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
0.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
0.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
0.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
0.5
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
0.4
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
0.2
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IGLV3-25 is potential prognostic, high expression is unfavorable in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
72.7
Number of samples
282
Samples
Sample
Description
TPM
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
7493.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
1686.3
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
1393.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
1354.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
1240.3
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
734.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
684.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
635.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
476.2
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
280.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
243.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
227.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
209.1
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
194.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
182.8
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
154.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
154.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
150.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
135.1
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
130.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
128.8
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
127.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
109.6
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
103.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
90.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
87.1
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
74.6
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
73.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
73.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
71.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
68.7
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
61.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
61.3
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
61.0
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
60.8
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
59.4
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
58.8
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
57.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
55.8
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
43.6
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
41.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
40.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
39.7
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
39.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
37.7
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
37.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
36.8
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
34.7
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
32.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
31.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
29.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
26.8
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
23.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
20.5
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
19.9
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.8
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
19.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
18.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
18.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
17.6
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
17.4
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
17.3
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
16.7
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
16.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.3
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
16.2
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
16.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
14.6
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
14.4
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
14.4
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
14.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
14.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
13.9
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
13.9
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
13.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
12.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
11.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
11.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
11.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
11.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
10.2
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.1
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.1
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
9.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
9.8
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
9.7
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
9.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
9.0
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
8.8
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
8.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
8.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
8.1
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
8.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
7.9
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
7.9
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
7.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
7.0
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
6.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
6.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
6.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
5.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
5.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
4.9
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
4.6
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
4.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
4.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
3.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
3.9
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
3.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
3.8
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
3.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
3.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
3.4
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
3.3
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
3.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
3.0
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
2.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
2.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
2.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
2.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
2.4
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
2.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
2.3
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
2.3
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
2.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
2.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
2.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
2.1
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
2.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
1.9
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
1.8
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
1.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
1.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
1.7
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
1.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
1.5
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
1.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
1.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
1.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
1.4
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
1.3
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
1.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
1.3
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
1.1
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.1
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
1.1
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
1.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
1.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
1.1
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
1.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
1.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
1.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
1.0
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
1.0
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
0.9
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
0.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
0.9
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
0.9
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
0.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
0.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
0.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
0.8
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
0.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
0.8
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
0.7
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
0.6
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
0.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
0.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
0.6
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
0.6
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
0.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.5
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
0.5
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
0.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
0.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
0.5
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
0.4
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
0.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
0.4
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
0.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
0.4
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
0.4
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
0.3
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
0.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
0.3
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
0.3
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
0.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
0.3
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
0.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
0.3
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
0.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
0.3
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
0.3
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
0.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
0.2
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
0.2
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
0.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
0.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
0.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
0.2
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
0.2
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
0.2
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
0.2
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
0.1
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.1
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
0.1
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
0.1
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
0.1
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
0.1
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
0.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
0.1
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
0.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
0.1
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
0.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
0.1
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
0.1
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.0
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
0.0
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.0
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
0.0
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
