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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSN is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.7
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
30.2
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
25.2
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
24.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
22.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
21.2
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
20.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
18.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
16.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
15.7
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.6
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
14.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
13.7
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
13.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
12.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.4
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.9
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
11.8
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
11.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
11.1
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
10.5
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
10.5
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
10.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
9.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
9.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
9.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
9.6
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
9.5
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.3
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
9.1
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
8.6
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.5
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
8.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
8.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.0
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
8.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
8.0
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
7.8
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.6
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
7.5
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
7.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
6.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
6.6
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.4
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.1
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
5.9
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
5.7
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
5.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.3
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
4.9
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
4.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
3.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSN is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
18.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
54.7
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
51.1
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
49.6
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
45.5
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
42.1
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
40.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
35.6
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
35.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
34.1
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
33.3
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
33.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
33.1
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
32.2
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
32.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
31.7
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
31.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
31.1
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
31.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
30.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
30.9
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
30.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
30.8
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
30.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
30.4
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
30.1
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
29.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
29.1
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
28.7
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
28.7
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
28.6
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
28.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
28.4
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
28.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
28.3
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
28.3
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
27.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
27.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
27.8
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
27.7
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
27.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.4
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
27.2
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
27.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
27.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
27.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
27.1
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
27.0
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
26.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
26.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
26.6
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
26.5
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
26.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
26.3
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
26.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
26.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
26.2
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
26.2
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
26.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
26.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
25.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
25.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
25.8
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
25.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
25.6
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
25.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
25.4
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
25.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
25.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
25.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
25.2
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
25.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
25.0
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
24.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
24.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
24.8
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
24.6
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
24.5
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
24.3
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
24.3
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
24.2
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
24.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
24.0
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
23.9
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
23.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
23.8
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
23.8
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
23.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
23.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
23.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
23.6
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
23.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
23.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
23.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
23.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
23.0
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
23.0
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
23.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
23.0
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
22.9
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
22.9
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
22.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
22.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
22.8
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
22.8
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
22.8
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
22.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
22.7
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
22.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
22.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
22.7
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
22.7
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
22.7
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
22.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.6
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
22.5
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
22.5
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
22.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
22.4
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
22.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
22.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
22.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
22.3
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
22.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
22.2
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
22.1
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
22.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
22.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
22.0
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
22.0
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
22.0
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
22.0
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
22.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
21.8
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
21.8
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
21.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
21.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
21.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
21.7
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.7
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
21.6
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.6
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
21.6
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
21.6
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
21.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
21.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
21.5
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
21.5
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
21.5
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
21.4
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
21.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
21.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.3
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
21.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
21.2
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
21.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
21.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
21.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
21.1
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
21.1
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
21.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
21.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
21.0
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.9
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
20.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
20.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
20.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
20.7
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
20.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
20.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
20.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
20.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
20.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
20.6
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
20.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
20.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
20.5
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
20.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
20.5
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
20.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
20.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
20.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
20.3
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
20.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
20.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
20.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
20.3
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
20.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
20.3
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
20.3
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
20.2
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
20.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
20.2
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
20.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
20.1
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
20.1
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
20.0
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
20.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
20.0
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
20.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
19.9
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
19.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
19.9
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
19.9
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
19.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
19.9
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
19.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
19.8
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
19.8
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
19.8
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
19.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
19.8
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
19.8
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
19.8
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
19.7
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
19.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.7
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
19.7
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
19.7
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
19.6
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
19.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
19.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
19.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
19.5
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
19.5
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.4
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
19.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
19.4
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
19.4
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
19.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
19.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
19.3
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
19.3
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
19.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
19.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
19.2
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
19.1
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
19.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
19.1
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
19.1
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.0
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.0
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
18.9
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
18.8
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
18.8
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
18.8
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
18.8
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
18.7
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
18.7
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
18.7
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
18.7
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.7
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
18.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.6
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
18.6
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
18.6
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
18.6
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
18.6
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
18.6
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
18.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
18.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
18.5
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.4
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
18.4
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
18.4
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
18.3
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
18.2
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
18.2
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
18.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
18.1
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
18.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
18.1
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
18.1
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
17.9
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
17.9
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
17.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
17.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
17.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
17.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
17.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
17.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
17.8
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
17.8
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.8
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.6
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
17.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
17.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
17.5
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
17.5
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
17.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
17.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
17.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
17.5
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
17.5
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
17.5
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
17.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
17.4
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
17.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
17.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
17.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.4
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
17.4
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
17.3
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
17.3
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
17.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
17.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
17.2
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
17.2
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
17.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
17.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
17.0
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
16.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
16.9
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
16.9
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
16.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
16.8
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
16.7
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
16.6
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
16.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
16.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
16.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
16.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.4
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
16.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
16.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.3
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
16.3
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
16.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
16.2
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
16.2
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
16.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
16.1
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
16.1
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
16.1
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
16.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
16.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
16.1
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
16.0
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
15.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
15.9
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
15.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.9
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
15.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
15.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
15.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
15.9
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
15.8
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
15.8
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
15.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
15.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
15.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
15.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
15.4
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
15.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
15.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
15.4
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
15.3
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
15.3
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
15.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
15.3
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.3
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
15.3
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
15.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
15.2
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
15.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
15.2
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
15.1
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
15.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
15.1
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
15.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
15.1
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
15.0
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
15.0
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
15.0
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
15.0
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
15.0
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
15.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
15.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
15.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
14.9
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
14.9
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
14.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.9
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
14.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
14.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
14.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
14.8
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
14.7
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
14.7
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
14.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
14.6
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
14.6
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
14.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.5
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
14.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
14.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
14.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
14.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.2
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
14.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
14.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
14.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
13.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
13.9
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
13.9
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
13.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
13.8
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
13.8
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
13.7
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.6
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
13.5
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
13.5
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
13.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
13.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
13.4
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
13.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
13.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
13.4
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
13.4
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
13.4
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.4
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
13.3
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
13.3
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
13.2
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
13.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
13.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
13.1
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
13.0
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
13.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.0
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
13.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
12.9
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
12.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
12.9
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
12.7
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.6
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
12.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
12.6
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.5
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
12.5
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
12.4
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.3
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
12.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.2
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.1
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
12.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
12.0
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
12.0
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
12.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
11.9
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
11.7
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
11.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
11.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
11.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
11.5
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
11.5
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
11.4
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
11.2
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
11.1
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
11.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
10.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
10.5
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
10.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
10.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
10.2
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
10.1
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
9.9
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
9.8
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
9.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
9.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
9.3
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
9.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
8.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
8.9
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
8.6
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
8.4
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.4
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
8.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
8.1
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
8.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
7.9
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
7.8
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
7.8
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
7.8
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.2
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
6.8
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
6.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
6.8
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
6.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
6.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
6.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
5.7
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSN is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
24.3
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
54.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
51.6
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
41.7
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
37.7
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
37.3
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
36.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
36.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
35.6
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
35.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
35.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
35.0
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
34.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
34.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
33.4
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
32.5
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
30.7
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
30.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
30.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
30.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
29.9
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
29.9
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
29.7
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
29.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
29.2
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
28.8
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
28.7
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
28.6
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
28.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
27.5
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
27.3
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
27.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
26.8
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
26.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
26.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
26.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
25.9
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
25.6
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
25.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
25.3
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
25.3
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
25.1
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
24.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
23.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
23.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
23.8
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
23.7
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
23.6
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
23.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
23.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
23.2
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
22.9
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
22.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
22.5
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
22.5
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
22.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
22.1
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
21.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
21.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
21.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
21.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
21.2
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
21.0
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
20.9
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
20.8
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
20.8
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
19.9
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
19.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
19.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
19.4
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.2
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
19.2
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
19.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
18.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
18.5
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
18.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
18.5
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
18.1
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
17.5
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
17.4
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
17.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.2
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
17.2
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
17.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
17.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
16.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
16.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
16.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
16.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
16.4
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
16.2
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
16.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
15.7
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
15.4
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
15.0
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
13.2
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
13.0
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
12.1
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TSN is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.9
Number of samples
282
Samples
Sample
Description
TPM
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
50.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
43.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
42.7
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
42.6
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
37.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
35.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
34.4
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
34.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
31.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
31.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
30.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
30.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
30.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
29.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
29.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
29.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
29.3
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
29.1
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
28.7
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
28.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
28.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
28.2
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
27.8
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
27.6
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
27.5
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
27.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
27.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
27.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
26.2
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
25.9
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
25.6
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
25.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
24.9
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
24.5
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
24.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
24.1
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
23.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
23.7
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
23.3
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
23.2
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
22.8
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
22.7
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
22.7
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
22.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
22.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
22.3
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
22.3
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
22.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
22.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
22.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
21.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
21.6
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
21.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
21.1
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
20.8
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
20.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
20.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
20.5
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
20.5
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.5
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
20.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
20.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
20.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
19.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
19.8
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
19.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.6
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
19.5
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
19.5
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
19.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
19.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
18.9
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
18.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
18.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
18.6
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
18.6
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
18.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
18.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
18.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
18.4
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
18.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
18.2
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
18.1
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
18.1
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
18.1
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
17.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
17.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
17.7
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.6
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
17.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
17.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
17.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.2
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
17.1
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
17.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
17.0
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
17.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
16.9
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
16.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
16.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.8
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
16.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
16.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
16.3
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
16.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.1
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
16.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
16.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
16.0
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
15.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
15.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
15.8
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
15.7
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.7
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
15.7
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
15.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
15.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
15.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
15.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
15.6
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
15.5
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
15.5
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
15.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
15.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
15.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
15.5
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
15.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
15.2
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
15.2
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
15.2
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
15.2
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
15.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
15.2
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.1
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
15.1
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
15.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
15.1
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
15.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
15.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
14.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.8
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
14.8
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
14.8
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
14.7
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.7
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
14.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
14.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
14.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
14.3
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
14.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
14.3
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.2
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
14.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
14.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
14.1
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
14.1
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
14.1
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
14.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
14.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
14.0
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
14.0
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.9
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
13.9
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
13.9
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
13.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
13.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
13.7
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
13.7
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
13.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
13.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
13.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
13.5
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
13.5
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
13.5
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
13.5
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
13.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
13.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
13.4
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
13.4
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
13.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
13.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
13.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
13.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.0
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
13.0
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
12.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
12.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
12.8
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.8
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
12.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
12.7
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
12.6
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
12.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
12.4
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
12.4
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.2
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
12.2
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.2
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
12.2
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
12.1
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
12.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
12.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
12.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
11.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
11.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
11.7
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
11.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
11.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
11.6
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.6
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
11.6
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
11.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.5
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
11.4
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
11.3
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
11.3
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
11.3
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.2
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
11.1
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
11.1
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.9
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
10.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
10.7
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
10.7
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.5
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
10.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
10.4
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.3
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.2
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
10.2
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
10.1
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
9.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
9.7
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
9.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
9.4
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
9.4
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
9.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
9.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
8.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
8.7
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
8.7
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
8.7
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
8.6
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
8.4
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
8.3
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.3
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
8.3
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
7.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
7.8
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
7.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
7.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
6.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
6.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
6.4
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
6.3
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
6.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
6.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
5.9
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
5.9
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
5.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
5.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
1.7
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0010160003
Tumor
0.7
CPT0089460004
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0078990003
Tumor
0.5
CPT0025110003
Tumor
0.5
CPT0078830003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0086030003
Tumor
0.4
CPT0069000003
Tumor
0.4
CPT0007860003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0088970003
Tumor
0.4
CPT0001340003
Tumor
0.4
CPT0012900004
Tumor
0.4
CPT0014370004
Tumor
0.4
CPT0081880003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0009000003
Tumor
0.3
CPT0088480003
Tumor
0.3
CPT0001180009
Tumor
0.3
CPT0065810003
Tumor
0.3
CPT0025580004
Tumor
0.2
CPT0006900003
Tumor
0.2
CPT0065930003
Tumor
0.2
CPT0000780007
Tumor
0.2
CPT0006440003
Tumor
0.2
CPT0079480003
Tumor
0.2
CPT0007320003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0011410003
Tumor
0.2
CPT0025050003
Tumor
0.2
CPT0085670003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0009080003
Normal
0.2
CPT0012370003
Tumor
0.2
CPT0079270003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0088760003
Tumor
0.2
CPT0014350001
Normal
0.2
CPT0078510003
Tumor
0.2
CPT0012080003
Tumor
0.2
CPT0012280003
Tumor
0.2
CPT0007870001
Normal
0.1
CPT0078930003
Tumor
0.1
CPT0092790003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0025610001
Normal
0.1
CPT0065750003
Tumor
0.1
CPT0088690003
Tumor
0.1
CPT0000870016
Tumor
0.1
CPT0079000001
Normal
0.1
CPT0069010001
Normal
0.1
CPT0006950001
Normal
0.1
CPT0082010001
Normal
0.1
CPT0012770003
Normal
0.1
CPT0079230003
Tumor
0.1
CPT0075130003
Tumor
0.1
CPT0017850003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0081620001
Normal
0.1
CPT0000890001
Normal
0.1
CPT0015810003
Tumor
0.1
CPT0012180003
Tumor
0.1
CPT0065450001
Normal
0.1
CPT0025290003
Tumor
0.1
CPT0023710001
Normal
0.1
CPT0078940001
Normal
0.1
CPT0081600003
Tumor
0.1
CPT0078670001
Normal
0.1
CPT0001500009
Tumor
0.1
CPT0006630003
Tumor
0.1
CPT0025170003
Tumor
0.1
CPT0000790001
Normal
0.1
CPT0018250001
Normal
0.1
CPT0019130003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0002270011
Tumor
0.1
CPT0012670003
Tumor
0.1
CPT0079410003
Tumor
0.1
CPT0088920001
Normal
0.1
CPT0010170001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0064400001
Normal
0.1
CPT0023360001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0012570003
Normal
0.0
CPT0089480003
Normal
0.0
CPT0019160001
Normal
0.0
CPT0001540009
Tumor
0.0
CPT0088500001
Normal
0.0
CPT0024670003
Tumor
0.0
CPT0025350003
Tumor
0.0
CPT0014130001
Normal
0.0
CPT0025060001
Normal
0.0
CPT0079430001
Normal
0.0
CPT0092800003
Normal
0.0
CPT0000660001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0088900003
Tumor
0.0
CPT0024680001
Normal
0.0
CPT0065690003
Tumor
0.0
CPT0017450001
Normal
0.0
CPT0020120003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0092310003
Normal
0.0
CPT0001230001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0010110003
Tumor
0.0
CPT0012290003
Normal
0.0
CPT0077140001
Normal
0.0
CPT0006730001
Normal
0.0
CPT0077500001
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0013790003
Normal
0.0
CPT0079380003
Tumor
0.0
CPT0086890003
Normal
0.0
CPT0069160003
Tumor
0.0
CPT0075570001
Normal
0.0
CPT0075720003
Tumor
0.0
CPT0009020003
Normal
0.0
CPT0089040001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0001190001
Normal
0.0
CPT0086970003
Normal
0.0
CPT0086820003
Tumor
0.0
CPT0078840001
Normal
0.0
CPT0063640001
Normal
0.0
CPT0071150004
Tumor
0.0
CPT0066430001
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0009060003
Tumor
-0.1
CPT0088640003
Normal
-0.1
CPT0025920001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0078800003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0066470004
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0066520001
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0000640003
Tumor
-0.1
CPT0065820001
Normal
-0.1
CPT0017410003
Tumor
-0.1
CPT0086830003
Normal
-0.1
CPT0023690003
Tumor
-0.1
CPT0089020003
Tumor
-0.1
CPT0076350001
Normal
-0.1
CPT0014450004
Tumor
-0.1
CPT0075560003
Tumor
-0.1
CPT0007470001
Normal
-0.1
CPT0079300001
Normal
-0.1
CPT0063320003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0011240003
Tumor
-0.1
CPT0088780001
Normal
-0.1
CPT0014470001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0001220008
Tumor
-0.1
CPT0063630003
Tumor
-0.1
CPT0026420001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0015910003
Tumor
-0.1
CPT0001350001
Normal
-0.1
CPT0006530001
Normal
-0.1
CPT0079510001
Normal
-0.1
CPT0002370001
Normal
-0.1
CPT0065870003
Tumor
-0.1
CPT0086950003
Tumor
-0.1
CPT0087050003
Normal
-0.1
CPT0092730003
Tumor
-0.2
CPT0020130001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0088630003
Tumor
-0.2
CPT0069190001
Normal
-0.2
CPT0092160003
Tumor
-0.2
CPT0075170001
Normal
-0.2
CPT0023350003
Tumor
-0.2
CPT0020020001
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0084590001
Normal
-0.3
CPT0078530001
Normal
-0.3
CPT0092190003
Normal
-0.3
CPT0079180003
Tumor
-0.3
CPT0002350011
Tumor
-0.3
CPT0066480003
Tumor
-0.4
CPT0001260009
Tumor
-0.4
CPT0088550004
Tumor
-0.5
CPT0078660003
Tumor
-0.5
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
