Expression of SELENOH in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

SELENOH is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 69.93

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

100.4

Number of samples

362

Samples

Sample	Description	TPM
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	334.8
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	268.5
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	258.9
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	253.8
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	243.9
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	215.9
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	214.3
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	205.4
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	200.4
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	196.9
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	187.4
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	187.3
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	187.2
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	182.7
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	181.6
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	172.7
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	172.4
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	171.5
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	160.3
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	158.9
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	158.5
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	158.1
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	158.0
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	157.8
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	157.0
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	156.5
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	155.9
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	154.4
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	154.0
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	153.9
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	153.7
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	151.3
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	148.0
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	147.6
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	147.0
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	147.0
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	145.7
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	145.6
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	143.9
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	142.7
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	142.4
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	141.6
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	141.4
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	141.2
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	141.0
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	139.2
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	139.0
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	139.0
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	138.6
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	138.6
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	137.6
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	137.3
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	137.2
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	137.1
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	137.0
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	136.5
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	136.5
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	136.2
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	135.5
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	135.4
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	135.3
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	135.3
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	135.3
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	135.0
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	134.9
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	133.8
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	133.6
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	133.0
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	132.8
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	132.7
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	132.2
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	131.9
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	131.9
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	131.2
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	130.9
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	130.8
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	130.7
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	130.2
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	129.2
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	128.8
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	128.8
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	128.4
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	128.1
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	127.9
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	127.7
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	127.5
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	126.2
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	126.1
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	126.0
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	125.1
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	124.6
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	124.0
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	123.8
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	123.7
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	123.5
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	122.9
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	122.7
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	122.6
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	122.0
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	121.9
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	120.4
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	119.2
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	118.9
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	118.6
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	118.6
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	118.1
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	118.0
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	117.6
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	117.4
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	116.6
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	116.4
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	116.1
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	115.5
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	115.5
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	115.5
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	114.8
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	114.7
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	113.6
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	113.6
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	113.4
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	112.8
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	112.3
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	111.9
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	111.6
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	111.0
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	110.2
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	109.8
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	109.6
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	109.4
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	109.2
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	109.1
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	109.0
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	108.8
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	108.8
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	108.7
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	108.2
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	108.1
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	107.3
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	107.1
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	106.8
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	106.6
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	106.0
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	105.6
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	105.4
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	105.0
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	104.2
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	104.1
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	103.6
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	103.5
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	103.2
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	102.9
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	102.7
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	102.6
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	102.6
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	102.6
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	102.6
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	102.2
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	102.0
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	101.6
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	101.3
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	101.1
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	101.1
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	100.7
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	100.5
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	100.1
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	99.8
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	98.7
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	98.1
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	97.7
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	97.7
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	97.6
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	97.0
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	97.0
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	96.7
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	96.6
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	96.6
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	96.3
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	95.3
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	95.0
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	94.5
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	93.5
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	93.3
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	93.3
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	93.2
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	93.1
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	93.0
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	92.8
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	92.7
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	92.6
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	92.5
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	92.2
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	91.9
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	91.3
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	91.3
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	91.2
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	90.5
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	90.3
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	89.2
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	89.1
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	89.0
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	88.8
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	88.6
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	88.4
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	87.9
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	87.7
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	87.6
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	87.5
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	87.4
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	87.4
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	87.3
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	87.3
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	86.6
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	86.5
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	86.2
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	85.9
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	85.9
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	85.8
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	85.4
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	85.2
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	84.8
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	84.7
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	84.7
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	84.4
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	84.2
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	83.9
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	83.9
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	83.8
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	83.5
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	83.3
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	83.0
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	82.6
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	82.6
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	82.2
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	82.2
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	82.2
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	82.0
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	81.6
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	81.3
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	81.0
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	80.6
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	80.5
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	80.5
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	80.3
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	80.3
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	80.2
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	80.0
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	79.6
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	79.3
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	79.2
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	79.0
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	78.6
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	78.2
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	78.1
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	77.2
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	77.1
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	76.9
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	76.8
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	76.1
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	75.4
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	75.4
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	74.6
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	74.2
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	73.7
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	73.7
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	73.0
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	72.6
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	72.6
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	72.4
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	71.7
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	71.6
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	71.5
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	71.3
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	71.1
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	71.0
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	70.9
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	70.8
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	70.7
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	70.6
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	70.1
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	70.0
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	69.9
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	69.8
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	69.4
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	69.1
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	69.1
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	69.1
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	68.9
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	68.8
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	68.6
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	68.4
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	68.0
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	67.9
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	67.3
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	67.2
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	66.4
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	66.3
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	66.1
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	64.2
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	63.8
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	63.6
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	63.3
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	62.4
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	62.3
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	62.0
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	61.8
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	61.6
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	61.2
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	61.0
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	60.1
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	60.1
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	60.1
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	59.8
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	59.6
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	59.0
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	58.8
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	58.8
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	58.5
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	58.4
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	57.6
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	57.6
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	56.6
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	56.0
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	55.8
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	55.8
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	55.6
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	55.2
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	54.8
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	54.5
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	54.4
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	53.9
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	53.8
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	52.1
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	52.1
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	52.0
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	51.8
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	51.4
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	50.7
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	50.7
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	50.5
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	50.2
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	49.9
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	49.6
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	49.2
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	48.3
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	48.2
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	46.7
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	46.3
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	45.5
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	44.9
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	42.9
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	41.8
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	40.4
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	39.8
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	35.6
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	35.3
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	33.0
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	32.1
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	31.6
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	27.8
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	26.5
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	21.9
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	17.8
Show allShow less

LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
695	Tumor	2.0
221	Tumor	1.6
921	Tumor	1.5
271	Tumor	1.5
131	Tumor	1.3
1031	Tumor	1.2
727	Tumor	1.1
127	Tumor	1.0
817	Tumor	1.0
925	Tumor	0.9
435	Tumor	0.9
743	Tumor	0.8
535	Tumor	0.8
975	Tumor	0.8
471	Tumor	0.8
211	Tumor	0.7
545	Tumor	0.7
635	Tumor	0.7
341	Tumor	0.7
963	Tumor	0.7
478	Normal	0.6
911	Tumor	0.6
665	Tumor	0.6
721	Tumor	0.6
425	Tumor	0.6
917	Tumor	0.6
516	Normal	0.5
881	Tumor	0.5
1015	Tumor	0.5
741	Tumor	0.5
661	Tumor	0.5
443	Tumor	0.5
483	Tumor	0.5
976	Normal	0.5
858	Normal	0.4
492	Normal	0.4
444	Normal	0.4
958	Normal	0.4
525	Tumor	0.4
517	Tumor	0.4
965	Tumor	0.4
277	Tumor	0.4
427	Tumor	0.4
553	Tumor	0.4
498	Normal	0.4
937	Tumor	0.4
536	Normal	0.4
192	Normal	0.3
647	Tumor	0.3
641	Tumor	0.3
916	Normal	0.3
698	Normal	0.3
524	Normal	0.3
482	Normal	0.3
413	Tumor	0.3
185	Tumor	0.3
943	Tumor	0.3
714	Normal	0.3
188	Normal	0.3
1032	Normal	0.3
285	Tumor	0.3
267	Tumor	0.3
964	Normal	0.3
1042	Normal	0.3
466	Normal	0.3
926	Normal	0.3
546	Normal	0.3
1044	Normal	0.3
1041	Tumor	0.3
786	Normal	0.3
146	Normal	0.3
138	Normal	0.2
126	Normal	0.2
913	Tumor	0.2
857	Tumor	0.2
1046	Normal	0.2
268	Normal	0.2
467	Tumor	0.2
696	Normal	0.2
311	Tumor	0.2
742	Normal	0.2
1014	Normal	0.2
628	Normal	0.2
852	Normal	0.2
866	Normal	0.2
944	Normal	0.2
472	Normal	0.2
722	Normal	0.2
297	Tumor	0.2
724	Normal	0.2
436	Normal	0.2
818	Normal	0.2
538	Normal	0.2
954	Normal	0.2
816	Normal	0.2
356	Normal	0.2
716	Normal	0.1
113	Tumor	0.1
737	Tumor	0.1
224	Normal	0.1
723	Tumor	0.1
918	Normal	0.1
148	Normal	0.1
534	Normal	0.1
686	Normal	0.1
272	Normal	0.1
136	Normal	0.1
884	Normal	0.1
814	Normal	0.1
222	Normal	0.1
914	Normal	0.1
361	Tumor	0.1
923	Tumor	0.1
728	Normal	0.1
367	Tumor	0.1
484	Normal	0.1
966	Normal	0.1
447	Tumor	0.1
428	Normal	0.1
558	Normal	0.1
298	Normal	0.1
756	Normal	0.1
924	Normal	0.1
1043	Tumor	0.1
518	Normal	0.1
968	Normal	0.1
362	Normal	0.1
648	Normal	0.1
785	Tumor	0.1
514	Normal	0.1
874	Normal	0.1
474	Normal	0.1
477	Tumor	0.1
533	Tumor	0.1
981	Tumor	0.1
364	Normal	0.1
666	Normal	0.1
415	Tumor	0.1
824	Normal	0.1
278	Normal	0.1
642	Normal	0.1
778	Normal	0.1
354	Normal	0.1
984	Normal	0.1
738	Normal	0.1
162	Normal	0.1
312	Normal	0.1
128	Normal	0.1
214	Normal	0.1
563	Tumor	0.1
823	Tumor	0.0
616	Normal	0.0
132	Normal	0.0
351	Tumor	0.0
396	Normal	0.0
922	Normal	0.0
662	Normal	0.0
862	Normal	0.0
455	Tumor	0.0
114	Normal	0.0
938	Normal	0.0
262	Normal	0.0
135	Tumor	0.0
564	Normal	0.0
426	Normal	0.0
1022	Normal	0.0
462	Normal	0.0
172	Normal	0.0
573	Tumor	0.0
228	Normal	0.0
912	Normal	0.0
868	Normal	0.0
526	Normal	0.0
487	Tumor	0.0
882	Normal	0.0
715	Tumor	0.0
574	Normal	0.0
1028	Normal	0.0
978	Normal	0.0
1016	Normal	0.0
384	Normal	0.0
424	Normal	0.0
636	Normal	0.0
877	Tumor	0.0
352	Normal	0.0
491	Tumor	0.0
111	Normal	0.0
672	Normal	0.0
967	Tumor	0.0
494	Normal	-0.1
618	Normal	-0.1
744	Normal	-0.1
412	Normal	-0.1
232	Normal	-0.1
284	Normal	-0.1
416	Normal	-0.1
376	Normal	-0.1
387	Tumor	-0.1
465	Tumor	-0.1
488	Normal	-0.1
196	Normal	-0.1
434	Normal	-0.1
746	Normal	-0.1
456	Normal	-0.1
957	Tumor	-0.1
1045	Tumor	-0.1
195	Tumor	-0.1
365	Tumor	-0.1
422	Normal	-0.1
493	Tumor	-0.1
213	Tumor	-0.1
366	Normal	-0.1
713	Tumor	-0.1
554	Normal	-0.1
568	Normal	-0.1
212	Normal	-0.2
983	Tumor	-0.2
395	Tumor	-0.2
344	Normal	-0.2
468	Normal	-0.2
343	Tumor	-0.2
1026	Normal	-0.2
864	Normal	-0.2
258	Normal	-0.2
386	Normal	-0.2
414	Normal	-0.2
685	Tumor	-0.2
421	Tumor	-0.2
385	Tumor	-0.2
481	Tumor	-0.2
956	Normal	-0.2
218	Normal	-0.2
671	Tumor	-0.2
448	Normal	-0.2
328	Normal	-0.2
342	Normal	-0.2
124	Normal	-0.2
1025	Tumor	-0.2
358	Normal	-0.3
432	Normal	-0.3
283	Tumor	-0.3
617	Tumor	-0.3
217	Tumor	-0.3
446	Normal	-0.3
223	Tumor	-0.3
191	Tumor	-0.3
187	Tumor	-0.3
383	Tumor	-0.3
982	Normal	-0.3
286	Normal	-0.3
145	Tumor	-0.3
331	Tumor	-0.3
873	Tumor	-0.3
697	Tumor	-0.3
528	Normal	-0.3
572	Normal	-0.3
664	Normal	-0.3
327	Tumor	-0.3
394	Normal	-0.3
125	Tumor	-0.3
955	Tumor	-0.4
861	Tumor	-0.4
464	Normal	-0.4
142	Normal	-0.4
813	Tumor	-0.4
388	Normal	-0.4
463	Tumor	-0.4
332	Normal	-0.4
878	Normal	-0.4
627	Tumor	-0.4
112	Tumor	-0.4
815	Tumor	-0.4
952	Normal	-0.4
433	Tumor	-0.5
977	Tumor	-0.5
461	Tumor	-0.5
186	Normal	-0.5
497	Tumor	-0.5
355	Tumor	-0.5
368	Normal	-0.5
314	Normal	-0.5
161	Tumor	-0.5
865	Tumor	-0.5
515	Tumor	-0.5
883	Tumor	-0.6
392	Normal	-0.6
867	Tumor	-0.6
363	Tumor	-0.6
137	Tumor	-0.6
537	Tumor	-0.6
423	Tumor	-0.6
141	Tumor	-0.6
915	Tumor	-0.6
123	Tumor	-0.7
523	Tumor	-0.7
391	Tumor	-0.7
375	Tumor	-0.7
863	Tumor	-0.7
445	Tumor	-0.7
227	Tumor	-0.8
755	Tumor	-0.8
513	Tumor	-0.8
353	Tumor	-0.9
851	Tumor	-0.9
451	Tumor	-0.9
615	Tumor	-0.9
951	Tumor	-0.9
1021	Tumor	-0.9
257	Tumor	-0.9
567	Tumor	-0.9
527	Tumor	-1.0
147	Tumor	-1.0
663	Tumor	-1.0
393	Tumor	-1.0
313	Tumor	-1.0
473	Tumor	-1.0
411	Tumor	-1.0
231	Tumor	-1.1
171	Tumor	-1.1
261	Tumor	-1.1
452	Normal	-1.1
777	Tumor	-1.1
953	Tumor	-1.2
431	Tumor	-1.2
571	Tumor	-1.2
1013	Tumor	-1.3
557	Tumor	-1.3
357	Tumor	-1.4
1027	Tumor	-1.4
745	Tumor	-1.5
Show allShow less

LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA048362
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Cholangiocarcinoma
Carcinoma, Hepatocellular, NOS