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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
113.3
nTPM
HPA Brain:
38.5
nTPM
GTEx:
113.3
nTPM
FANTOM5:
96.9
Scaled Tags Per Million
Mouse:
40.3
nTPM
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
38.5
Sample id
Sample description
nTPM
Amygdala nTPM: 38.5
2814
Male, age 76, right hemisphere
45.6
2517
Female, age 94, left hemisphere
38.6
1987
Female, age 91, left hemisphere
38.0
2514
Male, age 75, right hemisphere
37.4
2695
Female, age 67, right hemisphere
33.1
Basal amygdala nTPM: 35.0
1955
Male, age 76, both hemispheres
38.6
2685
Female, age 94, left hemisphere
37.6
2243
Female, age 91, right hemisphere
36.0
2110
Male, age 80, left hemisphere
34.6
2609
Male, age 75, right hemisphere
34.6
2827
Female, age 67, right hemisphere
28.7
Central amygdala nTPM: 38.0
1905
Male, age 76, both hemispheres
46.6
2826
Female, age 94, left hemisphere
44.5
2515
Male, age 75, right hemisphere
40.6
2239
Male, age 80, left hemisphere
32.2
2701
Female, age 91, right hemisphere
25.9
Corticomedial amygdala nTPM: 35.1
2829
Male, age 80, left hemisphere
38.6
2242
Female, age 91, right hemisphere
35.9
2428
Male, age 75, right hemisphere
35.1
2535
Female, age 67, right hemisphere
34.1
2429
Female, age 94, left hemisphere
34.0
2240
Male, age 76, both hemispheres
32.8
Lateral amygdala nTPM: 36.2
2534
Female, age 94, left hemisphere
47.3
1883
Male, age 76, both hemispheres
45.1
2516
Male, age 75, right hemisphere
35.7
2255
Female, age 91, right hemisphere
31.0
2256
Male, age 80, left hemisphere
29.4
2830
Female, age 67, right hemisphere
28.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
113.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 113.3
Samples: 152
Max nTPM: 416.2
Min nTPM: 50.8
Std nTPM: 50.7
Median nTPM: 102.7
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
416.2
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
405.3
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
262.4
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
247.5
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
236.7
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
195.9
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
187.9
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
180.1
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
179.0
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
177.4
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
176.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
176.6
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
175.9
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
174.4
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
173.2
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
172.5
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
171.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
165.7
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
154.4
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
151.2
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
150.8
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
146.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
145.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
145.6
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
143.2
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
142.9
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
142.5
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
142.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
141.0
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
139.0
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
138.2
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
138.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
136.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
129.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
127.0
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
126.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
125.6
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
125.5
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
125.2
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
124.9
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
124.2
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
123.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
121.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
121.3
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
120.7
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
120.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
119.4
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
118.2
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
118.2
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
117.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
117.9
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
117.7
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
116.7
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
116.5
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
116.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
116.3
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
115.7
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
115.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
113.9
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
113.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
113.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
112.9
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
112.7
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
112.1
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
110.8
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
110.4
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
110.3
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
109.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
108.4
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
107.2
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
107.1
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
104.9
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
104.9
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
103.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
103.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
103.0
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
102.3
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
101.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
100.4
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
99.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
99.4
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
99.0
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
99.0
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
98.6
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
98.4
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
98.4
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
96.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
95.4
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
94.7
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
93.9
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
92.9
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
92.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
92.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
91.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
91.7
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
91.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
90.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
90.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
89.4
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
89.2
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
88.8
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
88.5
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
88.4
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
88.1
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
87.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
87.6
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
86.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
86.7
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
85.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
85.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
85.5
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
85.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
85.3
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
83.8
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
82.5
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
81.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
81.4
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
81.2
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
80.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
80.8
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
79.4
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
78.9
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
77.7
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
77.6
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
77.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
76.6
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
76.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
75.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
74.8
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
74.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
73.6
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
72.1
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
72.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
71.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
71.0
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
69.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
69.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
69.2
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
69.1
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
68.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
68.5
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
68.5
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
67.6
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
64.4
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
63.9
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
63.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
62.5
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
58.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
58.6
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
58.4
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
53.2
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
50.8
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.