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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JPT2 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
67.3
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
55.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
48.2
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
41.9
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
41.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
40.5
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
36.8
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
33.5
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
30.5
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
28.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
28.3
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
27.4
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
26.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
25.9
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
25.8
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
25.0
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
24.4
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
24.1
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
23.9
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
22.4
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
20.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
20.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
20.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
18.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
18.3
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
18.3
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
16.9
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
16.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
16.7
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
16.6
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
15.9
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
15.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
15.2
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
15.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
14.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
14.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
14.7
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
13.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
13.6
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
12.9
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.4
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
12.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
12.1
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
12.1
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
12.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
11.8
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
11.5
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
11.5
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.2
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
10.9
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
10.6
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
10.5
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
10.1
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
9.8
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
9.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
8.2
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
7.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
6.0
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
5.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
5.4
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
5.3
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
5.0
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JPT2 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
54.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
190.5
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
146.2
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
141.4
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
141.0
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
135.9
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
132.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
130.6
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
129.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
123.5
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
120.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
119.1
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
118.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
116.1
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
115.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
112.1
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
110.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
109.1
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
105.6
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
105.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
104.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
101.5
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
101.0
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
100.3
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
100.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
100.1
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
99.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
98.4
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
98.2
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
97.4
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
94.5
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
94.4
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
93.7
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
92.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
92.2
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
92.2
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
91.5
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
89.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
88.4
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
88.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
87.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
87.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
87.1
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
86.6
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
85.9
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
85.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
85.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
85.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
84.9
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
84.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
83.3
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
83.2
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
83.2
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
82.7
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
82.3
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
82.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
81.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
81.5
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
81.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
81.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
80.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
80.5
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
80.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
80.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
79.9
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
79.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
79.4
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
79.1
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
78.7
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
78.6
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
78.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
78.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
77.7
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
77.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
77.1
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
76.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
76.2
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
76.0
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
76.0
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
75.9
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
75.6
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
75.4
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
75.4
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
75.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
75.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
75.0
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
74.9
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
74.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
74.9
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
74.8
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
74.7
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
74.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
74.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
74.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
74.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
74.4
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
74.2
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
73.7
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
73.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
73.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
73.2
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
73.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
73.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
73.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
73.0
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
73.0
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
72.6
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
72.4
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
72.4
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
72.2
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
72.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
71.9
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
71.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
71.6
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
71.4
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
71.3
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
70.5
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
70.4
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
70.4
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
69.9
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
69.8
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
69.8
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
69.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
69.6
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
69.6
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
69.4
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
68.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
68.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
68.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
68.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
68.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
68.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
68.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
68.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
67.7
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
67.6
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
67.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
67.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
67.2
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
67.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
67.1
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
66.9
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
66.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
66.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
66.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
66.2
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
66.1
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
66.0
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
65.8
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
65.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
65.6
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
65.5
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
65.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
65.0
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
64.8
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
64.7
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
64.7
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
64.6
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
64.5
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
64.3
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
64.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
63.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
63.4
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
63.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
63.3
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
63.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
63.2
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
62.8
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
62.5
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
62.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
62.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
61.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
61.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
61.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
61.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
61.7
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
61.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
61.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
61.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
61.0
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
61.0
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
61.0
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
60.8
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
60.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
60.8
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
60.7
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
60.6
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
60.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
60.5
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
60.3
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
60.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
60.1
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
60.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
59.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
59.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
59.7
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
59.6
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
59.6
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
59.5
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
59.4
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
59.2
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
58.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
58.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
58.7
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
58.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
58.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
58.4
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
58.4
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
58.1
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
58.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
57.9
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
57.7
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
57.7
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
57.4
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
57.3
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
57.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
57.0
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
56.9
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
56.8
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
56.7
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
56.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
56.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
56.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
56.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
56.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
56.2
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
56.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
56.1
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
56.1
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
56.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
55.9
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
55.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
55.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
55.2
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
55.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
54.5
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
54.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
54.4
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
54.4
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
54.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
54.3
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
54.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
53.8
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
53.8
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
53.7
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
53.7
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
53.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
53.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
53.7
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
53.7
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
53.5
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
53.3
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
53.2
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
53.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
53.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
53.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
52.9
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
52.7
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
52.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
52.6
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
52.4
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
52.4
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
52.4
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
52.4
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
52.3
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
52.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
52.2
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
52.2
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
52.1
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
52.0
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
52.0
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
51.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
51.6
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
51.6
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
51.5
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
51.3
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
51.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
51.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
51.1
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
50.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
50.9
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
50.8
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
50.8
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
50.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
50.7
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
50.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
50.4
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
49.9
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
49.8
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
49.7
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
49.6
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
49.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
49.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
49.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
49.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
49.5
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
49.4
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
49.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
49.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
49.2
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
49.1
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
49.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
48.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
48.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
48.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
48.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
48.1
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
48.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
47.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
47.8
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
47.7
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
47.7
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
47.6
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
47.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
47.4
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
47.4
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
47.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
47.2
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
47.2
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
47.1
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
47.0
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
46.8
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
46.8
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
46.7
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
46.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
46.6
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
46.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
46.4
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
46.3
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
46.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
46.2
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
45.7
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
45.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
45.7
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
45.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
45.3
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
45.1
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
45.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
44.8
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
44.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
44.7
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
44.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
44.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
44.3
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
44.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
44.1
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
44.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
44.0
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
43.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
43.5
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
43.4
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
43.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
43.2
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
43.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
43.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
42.8
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
42.8
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
42.6
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
42.4
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
42.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
42.0
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
42.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
41.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
41.9
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
41.9
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
41.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
41.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
41.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
41.6
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
41.6
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
41.3
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
41.3
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
41.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
41.2
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
41.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
40.9
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
40.8
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
40.8
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
40.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
40.7
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
40.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
40.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
40.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
40.2
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
40.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
40.1
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
40.0
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
39.7
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
39.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
39.6
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
39.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
39.2
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
39.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
39.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
38.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
38.6
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
38.5
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
38.4
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
38.2
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
38.2
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
37.9
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
37.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
37.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
37.4
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
37.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
37.3
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
37.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
37.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
37.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
36.8
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
36.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
36.5
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
36.4
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
35.9
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
35.9
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
35.9
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
35.6
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
35.6
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
35.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
35.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
35.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
35.0
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
34.9
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
34.5
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
34.4
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
34.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
33.8
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
33.6
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
33.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
33.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
33.1
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
33.1
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
33.0
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
32.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
32.4
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
32.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
32.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
32.2
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
32.1
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
32.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
32.0
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
32.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
31.8
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
31.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
31.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
31.4
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
31.4
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
30.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
30.2
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
30.1
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
29.7
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
29.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
29.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
29.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
29.2
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
29.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
28.9
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
28.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
28.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
27.6
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
27.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
27.6
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
27.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
27.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
27.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
27.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
27.0
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
26.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
26.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
26.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
26.0
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
25.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
25.8
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
25.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
25.6
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
25.6
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
25.5
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
25.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
24.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
23.5
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
23.5
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
23.3
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
23.3
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
23.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
23.0
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
22.2
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
21.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
21.3
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
20.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
20.7
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
20.6
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
19.1
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
18.8
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
18.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
18.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
18.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
17.5
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
17.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
16.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
16.9
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
16.6
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
16.5
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
16.4
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
16.4
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
16.3
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
15.9
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
15.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
15.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
15.0
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
13.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
13.0
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
12.2
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
10.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
10.6
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
10.1
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
9.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.0
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.4
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
8.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
7.0
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
6.8
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JPT2 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
59.9
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
154.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
124.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
106.9
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
102.4
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
100.7
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
100.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
98.3
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
98.0
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
97.4
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
95.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
93.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
91.4
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
87.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
85.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
84.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
83.8
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
83.1
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
82.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
80.4
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
79.3
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
79.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
77.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
77.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
76.6
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
75.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
74.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
72.1
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
71.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
70.9
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
70.7
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
70.6
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
70.1
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
69.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
68.8
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
67.7
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
67.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
66.3
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
65.4
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
65.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
63.5
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
63.2
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
63.1
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
62.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
61.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
60.7
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
60.6
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
60.4
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
58.4
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
56.5
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
56.1
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
56.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
55.5
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
55.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
54.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
53.7
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
53.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
51.8
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
51.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
50.9
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
50.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
49.9
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
49.7
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
48.9
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
48.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
48.0
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
47.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
46.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
46.4
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
46.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
46.0
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
46.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
44.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
44.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
44.3
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
42.0
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
41.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
41.6
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
40.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
40.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
39.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
39.2
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
37.7
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
37.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
36.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
36.7
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
35.2
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
35.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
34.6
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
33.3
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
33.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
32.2
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
31.6
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
28.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
27.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
24.7
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
24.2
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.1
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
22.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
JPT2 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
64.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
192.8
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
171.7
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
160.9
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
159.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
146.7
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
145.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
139.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
139.1
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
138.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
137.2
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
136.3
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
134.3
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
134.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
133.3
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
133.3
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
132.9
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
131.4
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
129.5
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
126.3
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
126.3
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
122.4
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
120.9
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
119.9
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
119.2
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
116.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
115.5
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
114.6
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
113.1
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
113.1
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
111.1
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
108.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
108.5
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
108.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
108.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
107.7
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
106.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
106.6
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
106.2
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
103.7
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
103.5
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
103.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
100.5
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
98.8
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
97.9
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
97.6
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
96.9
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
96.3
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
95.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
95.0
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
94.6
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
94.0
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
93.9
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
93.8
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
93.8
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
93.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
92.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
91.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
90.6
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
90.4
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
89.5
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
89.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
89.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
88.8
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
87.7
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
87.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
86.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
86.4
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
85.6
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
85.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
84.6
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
84.5
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
84.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
84.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
83.8
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
83.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
82.7
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
81.9
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
81.1
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
80.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
80.5
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
79.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
78.6
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
78.3
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
78.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
77.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
77.9
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
77.4
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
76.3
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
75.8
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
75.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
75.3
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
74.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
74.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
74.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
74.1
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
74.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
73.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
73.5
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
73.4
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
73.0
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
72.7
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
72.5
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
71.7
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
71.1
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
68.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
68.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
68.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
68.3
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
67.9
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
67.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
67.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
67.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
67.3
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
67.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
66.4
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
66.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
66.0
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
65.7
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
65.6
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
63.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
63.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
63.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
63.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
62.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
62.3
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
62.2
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
61.9
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
61.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
60.9
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
60.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
60.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
60.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
60.0
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
59.7
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
59.0
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
58.2
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
58.1
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
58.1
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
58.0
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
57.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
57.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
56.7
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
56.2
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
56.1
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
56.1
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
56.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
55.7
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
55.4
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
55.2
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
54.6
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
54.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
54.4
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
54.1
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
54.1
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
53.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
52.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
52.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
51.7
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
51.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
50.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
50.4
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
50.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
50.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
50.1
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
49.9
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
49.8
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
49.6
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
49.6
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
49.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
49.3
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
49.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
48.5
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
48.5
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
48.3
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
48.2
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
48.2
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
47.9
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
47.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
47.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
47.5
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
45.4
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
45.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
44.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
44.7
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
44.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
44.5
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
44.5
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
44.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
44.3
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
44.3
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
44.1
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
43.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
43.3
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
43.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
43.1
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
41.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
41.8
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
41.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
41.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
40.7
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
40.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
40.5
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
40.2
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
40.1
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
39.8
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
39.7
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
39.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
39.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
38.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
38.7
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
38.5
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
38.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
38.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
37.8
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
37.7
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
37.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
37.2
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
36.9
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
36.9
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
36.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
36.7
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
36.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
36.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
36.2
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
35.8
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
35.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
35.4
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
35.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
35.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
35.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
33.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
33.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
33.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
33.3
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
33.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
32.8
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
32.6
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
32.4
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
31.8
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
31.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
31.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
30.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
30.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
29.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
29.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
28.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
28.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
28.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
28.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
27.9
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
27.7
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
27.5
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
26.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
26.7
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
26.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
26.1
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
25.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
25.0
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
25.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
24.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
24.3
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
23.3
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
23.0
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
22.5
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.9
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
21.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
21.0
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
19.3
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
19.0
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
19.0
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
18.7
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
16.3
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
16.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
15.3
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
14.0
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
14.0
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
13.9
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
13.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
13.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.9
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
6.0
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RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0086820003
Tumor
1.1
CPT0011410003
Tumor
1.1
CPT0078800003
Tumor
1.0
CPT0001180009
Tumor
0.9
CPT0014450004
Tumor
0.9
CPT0069160003
Tumor
0.9
CPT0001260009
Tumor
0.8
CPT0077110003
Tumor
0.8
CPT0007320003
Tumor
0.8
CPT0084560003
Tumor
0.8
CPT0024670003
Tumor
0.7
CPT0014370004
Tumor
0.7
CPT0069000003
Tumor
0.7
CPT0025580004
Tumor
0.7
CPT0025880003
Tumor
0.6
CPT0006440003
Tumor
0.6
CPT0001500009
Tumor
0.6
CPT0071150004
Tumor
0.6
CPT0079230003
Tumor
0.6
CPT0006630003
Tumor
0.6
CPT0025230003
Tumor
0.6
CPT0079480003
Tumor
0.5
CPT0065930003
Tumor
0.5
CPT0012550003
Tumor
0.5
CPT0015810003
Tumor
0.5
CPT0009060003
Tumor
0.5
CPT0065810003
Tumor
0.5
CPT0065870003
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0017410003
Tumor
0.5
CPT0077490003
Tumor
0.5
CPT0019130003
Tumor
0.4
CPT0078830003
Tumor
0.4
CPT0025350003
Tumor
0.4
CPT0006900003
Tumor
0.4
CPT0085670003
Tumor
0.4
CPT0009000003
Tumor
0.4
CPT0078930003
Tumor
0.4
CPT0079270003
Tumor
0.4
CPT0015730003
Tumor
0.4
CPT0023350003
Tumor
0.4
CPT0088480003
Tumor
0.4
CPT0025050003
Tumor
0.4
CPT0012370003
Tumor
0.4
CPT0001540009
Tumor
0.3
CPT0092730003
Tumor
0.3
CPT0000870016
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0065430003
Tumor
0.3
CPT0079380003
Tumor
0.3
CPT0086360003
Tumor
0.3
CPT0021240003
Tumor
0.3
CPT0000640003
Tumor
0.3
CPT0001220008
Tumor
0.3
CPT0010110003
Tumor
0.3
CPT0014160003
Tumor
0.3
CPT0017850003
Tumor
0.3
CPT0079410003
Tumor
0.3
CPT0000780007
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0001340003
Tumor
0.2
CPT0007860003
Tumor
0.2
CPT0026410003
Tumor
0.2
CPT0089460004
Tumor
0.2
CPT0088690003
Tumor
0.2
CPT0081600003
Tumor
0.2
CPT0092160003
Tumor
0.2
CPT0088900003
Tumor
0.2
CPT0088630003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0075720003
Tumor
0.2
CPT0086870003
Tumor
0.2
CPT0075130003
Tumor
0.2
CPT0092190003
Normal
0.2
CPT0089020003
Tumor
0.2
CPT0063320003
Tumor
0.1
CPT0079510001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0081990003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0088970003
Tumor
0.1
CPT0078990003
Tumor
0.1
CPT0077310003
Tumor
0.1
CPT0023690003
Tumor
0.1
CPT0081880003
Tumor
0.1
CPT0079300001
Normal
0.0
CPT0002350011
Tumor
0.0
CPT0025290003
Tumor
0.0
CPT0012900004
Tumor
0.0
CPT0088760003
Tumor
0.0
CPT0025110003
Tumor
0.0
CPT0012670003
Tumor
0.0
CPT0092290003
Tumor
0.0
CPT0064370003
Tumor
0.0
CPT0063630003
Tumor
0.0
CPT0012080003
Tumor
0.0
CPT0019990003
Tumor
0.0
CPT0015910003
Tumor
0.0
CPT0078510003
Tumor
0.0
CPT0012640003
Normal
0.0
CPT0087040003
Tumor
0.0
CPT0020120003
Tumor
0.0
CPT0075170001
Normal
-0.1
CPT0066470004
Tumor
-0.1
CPT0011240003
Tumor
-0.1
CPT0025170003
Tumor
-0.2
CPT0081620001
Normal
-0.2
CPT0001230001
Normal
-0.2
CPT0075560003
Tumor
-0.2
CPT0066480003
Tumor
-0.2
CPT0024680001
Normal
-0.2
CPT0017450001
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0025610001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0001190001
Normal
-0.2
CPT0006530001
Normal
-0.3
CPT0014350001
Normal
-0.3
CPT0063640001
Normal
-0.3
CPT0002370001
Normal
-0.3
CPT0001270001
Normal
-0.3
CPT0009020003
Normal
-0.3
CPT0000660001
Normal
-0.3
CPT0066520001
Normal
-0.3
CPT0069190001
Normal
-0.3
CPT0001550001
Normal
-0.3
CPT0012920003
Normal
-0.3
CPT0077320001
Normal
-0.3
CPT0076330003
Tumor
-0.3
CPT0088500001
Normal
-0.3
CPT0065690003
Tumor
-0.3
CPT0088640003
Normal
-0.3
CPT0088570001
Normal
-0.3
CPT0019160001
Normal
-0.3
CPT0026420001
Normal
-0.3
CPT0088780001
Normal
-0.3
CPT0092310003
Normal
-0.4
CPT0086830003
Normal
-0.4
CPT0079180003
Tumor
-0.4
CPT0009080003
Normal
-0.4
CPT0012290003
Normal
-0.4
CPT0012180003
Tumor
-0.4
CPT0025060001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0020020001
Normal
-0.4
CPT0078840001
Normal
-0.4
CPT0079430001
Normal
-0.4
CPT0088550004
Tumor
-0.4
CPT0078670001
Normal
-0.4
CPT0086890003
Normal
-0.4
CPT0018250001
Normal
-0.4
CPT0075570001
Normal
-0.4
CPT0023360001
Normal
-0.4
CPT0089040001
Normal
-0.4
CPT0078940001
Normal
-0.4
CPT0006950001
Normal
-0.4
CPT0014130001
Normal
-0.4
CPT0089480003
Normal
-0.4
CPT0086970003
Normal
-0.4
CPT0000890001
Normal
-0.4
CPT0007870001
Normal
-0.4
CPT0064400001
Normal
-0.4
CPT0023710001
Normal
-0.4
CPT0065450001
Normal
-0.4
CPT0025920001
Normal
-0.4
CPT0069010001
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0077500001
Normal
-0.5
CPT0007470001
Normal
-0.5
CPT0014470001
Normal
-0.5
CPT0077140001
Normal
-0.5
CPT0020130001
Normal
-0.5
CPT0088710001
Normal
-0.5
CPT0063330001
Normal
-0.5
CPT0088920001
Normal
-0.5
CPT0082010001
Normal
-0.5
CPT0079000001
Normal
-0.5
CPT0012090003
Normal
-0.5
CPT0065820001
Normal
-0.5
CPT0066430001
Normal
-0.5
CPT0078660003
Tumor
-0.5
CPT0092800003
Normal
-0.5
CPT0001510001
Normal
-0.5
CPT0006730001
Normal
-0.5
CPT0002270011
Tumor
-0.6
CPT0086370003
Normal
-0.6
CPT0012570003
Normal
-0.6
CPT0012770003
Normal
-0.6
CPT0087050003
Normal
-0.6
CPT0010170001
Normal
-0.6
CPT0076350001
Normal
-0.6
CPT0013790003
Normal
-0.7
CPT0092740003
Normal
-0.9
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.