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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM11 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
17.4
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
58.8
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
57.8
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
52.3
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
52.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
51.6
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
48.7
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
40.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
38.7
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
38.5
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
34.0
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
30.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
28.8
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
27.6
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
26.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
25.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
25.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
25.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
24.4
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
24.3
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
24.2
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
24.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
23.8
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
23.3
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
23.2
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
23.2
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
22.4
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
21.7
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
21.5
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
19.9
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
19.3
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
18.2
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
16.7
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
15.9
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
15.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
15.3
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
14.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
11.6
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
8.8
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
8.0
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
7.9
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
7.4
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
6.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
6.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
4.1
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
3.8
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM11 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
65.5
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
57.4
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
43.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
39.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
38.9
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
35.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
31.7
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
30.5
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
28.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
27.0
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
26.5
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
26.1
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
25.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
25.4
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
25.2
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
24.9
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
24.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
23.5
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
23.0
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
23.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
23.0
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
22.7
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
22.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
22.5
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
22.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
22.3
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
22.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
22.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
21.8
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
21.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.4
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
21.0
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
20.9
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
20.9
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
20.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
20.8
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
20.7
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
20.5
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
20.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
20.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
20.3
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
20.3
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
20.2
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
20.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
20.1
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
20.1
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
19.9
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
19.9
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
19.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
19.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
19.6
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
19.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
19.6
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
19.5
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
19.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
19.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
19.2
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
19.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
19.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
19.1
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
19.0
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
19.0
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
19.0
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
18.9
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
18.9
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
18.9
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
18.8
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
18.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
18.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
18.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
18.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
18.5
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
18.5
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
18.5
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
18.3
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
18.3
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
18.2
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
18.2
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
18.2
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
18.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
18.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
18.0
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
17.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
17.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
17.8
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
17.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
17.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
17.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
17.4
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
17.3
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
17.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
17.1
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
17.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
17.0
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
17.0
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
16.9
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
16.7
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
16.7
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
16.7
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
16.6
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
16.6
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
16.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
16.6
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.6
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
16.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
16.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
16.5
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
16.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
16.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
16.3
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
16.3
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
16.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
16.2
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
16.2
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
16.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
16.1
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
16.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
16.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
16.0
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
16.0
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
15.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
15.9
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
15.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
15.9
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
15.9
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
15.8
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
15.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
15.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
15.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
15.7
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
15.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
15.6
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
15.6
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.6
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
15.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
15.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
15.3
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.3
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
15.3
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
15.3
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
15.2
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
15.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.1
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
15.1
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
15.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
15.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
15.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
15.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
14.9
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
14.9
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
14.9
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
14.8
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
14.8
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
14.8
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
14.8
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
14.8
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
14.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
14.7
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
14.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
14.6
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
14.6
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
14.5
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
14.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
14.5
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
14.5
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
14.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
14.4
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
14.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
14.4
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
14.4
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
14.4
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
14.4
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
14.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
14.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
14.3
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
14.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
14.2
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
14.2
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
14.2
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
14.2
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
14.2
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
14.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
14.1
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.1
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
14.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
14.1
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
14.1
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
14.1
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
14.1
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
14.1
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
14.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
14.0
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
14.0
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.0
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
14.0
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
14.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
14.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
13.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
13.9
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
13.9
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
13.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
13.9
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
13.9
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
13.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
13.8
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
13.8
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
13.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
13.8
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
13.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
13.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
13.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
13.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
13.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
13.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
13.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
13.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
13.5
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
13.5
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
13.5
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.5
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
13.4
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
13.4
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
13.4
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
13.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
13.3
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
13.3
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
13.3
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
13.3
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
13.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
13.3
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
13.2
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
13.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
13.2
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
13.2
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
13.1
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
13.1
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
13.1
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
13.0
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
13.0
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
13.0
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
13.0
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
12.9
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
12.9
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
12.9
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
12.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.8
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
12.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
12.7
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
12.7
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
12.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
12.7
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
12.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
12.7
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
12.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
12.6
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
12.6
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
12.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
12.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
12.5
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
12.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
12.4
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
12.4
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
12.4
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
12.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
12.3
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
12.3
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
12.3
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
12.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
12.2
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
12.2
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
12.2
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
12.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
12.1
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
12.1
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
12.1
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
12.1
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
12.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
12.1
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
12.0
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
12.0
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
12.0
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
12.0
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
11.9
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
11.9
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
11.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
11.9
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
11.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
11.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
11.8
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.8
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
11.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
11.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
11.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
11.7
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
11.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
11.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
11.6
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
11.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
11.6
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.5
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
11.5
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
11.5
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
11.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
11.5
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
11.5
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
11.4
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
11.4
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
11.3
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
11.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
11.3
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
11.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
11.2
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
11.2
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
11.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.1
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
11.1
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
11.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.0
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
11.0
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.0
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
11.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
11.0
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
10.9
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
10.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
10.8
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
10.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
10.8
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
10.8
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
10.8
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
10.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
10.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
10.8
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
10.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
10.6
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
10.6
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
10.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
10.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
10.4
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
10.4
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
10.4
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
10.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
10.3
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
10.3
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
10.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
10.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
10.2
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
10.2
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
10.1
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
10.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
10.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
10.1
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
10.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
10.0
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
10.0
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
9.9
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
9.9
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
9.9
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
9.9
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
9.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
9.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
9.8
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
9.7
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
9.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.7
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
9.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
9.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.7
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.7
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
9.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
9.6
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
9.6
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
9.6
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
9.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
9.5
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
9.5
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
9.4
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
9.4
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
9.4
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
9.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
9.4
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.3
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
9.3
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
9.3
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
9.3
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
9.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
9.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
9.2
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
9.2
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
9.1
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
9.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
9.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
9.0
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
9.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
8.9
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
8.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
8.8
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
8.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
8.8
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.7
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
8.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
8.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.7
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
8.7
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
8.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
8.6
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
8.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
8.6
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
8.5
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
8.5
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
8.4
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
8.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
8.3
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
8.3
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
8.3
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
8.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
8.0
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
7.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
7.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
7.9
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
7.9
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
7.8
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.8
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
7.7
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
7.7
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
7.7
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
7.6
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
7.5
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
7.4
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
7.3
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
7.3
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
7.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
7.1
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.0
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
7.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
6.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
6.5
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
6.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
6.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.4
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
6.4
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
6.4
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
6.3
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
6.3
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
6.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
5.9
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
5.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
5.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.8
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
5.8
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
5.8
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
5.7
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
5.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
5.6
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
5.6
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
5.4
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
5.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
5.3
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
5.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
5.2
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
5.2
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
5.1
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
5.1
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
5.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
5.0
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
5.0
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
4.9
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
4.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
4.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
4.2
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.2
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
4.2
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
4.2
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
4.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
4.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
4.0
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
3.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
3.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
3.4
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
3.2
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
3.2
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
3.2
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
3.2
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
2.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
2.8
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
2.6
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
2.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
2.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
2.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
2.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
2.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
2.0
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
1.8
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
1.5
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
1.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
1.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
1.4
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
1.3
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
1.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
1.0
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
0.9
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
0.8
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
0.6
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
0.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
0.3
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
0.3
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
0.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
0.2
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM11 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.5
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
31.6
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
20.9
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
20.7
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
18.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
18.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.9
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
17.2
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
17.1
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
17.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
16.6
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
16.3
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
16.3
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
16.1
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
16.0
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
15.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
15.8
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
15.7
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
15.6
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
15.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
15.2
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
15.0
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
14.9
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
14.7
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
14.7
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
14.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
14.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
14.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
14.4
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
14.4
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
14.4
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
14.3
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
14.2
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
14.2
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.2
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
14.1
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
13.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
13.9
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
13.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
13.7
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.6
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
13.4
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
12.9
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
12.9
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
12.9
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
12.7
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
12.7
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
12.6
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
12.5
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
12.4
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
12.4
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
12.3
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
12.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
12.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
11.7
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
11.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.7
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
11.5
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
11.1
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
10.9
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
10.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
10.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
10.2
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
10.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
10.0
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
10.0
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
9.9
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.9
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
9.7
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
9.7
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
9.6
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
9.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
9.5
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
9.3
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
9.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
9.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
8.8
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
8.2
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
8.1
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
7.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
6.9
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
6.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
6.6
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
6.5
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
6.2
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
5.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
5.6
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
4.5
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
4.4
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
3.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
2.7
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
2.5
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
2.4
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
2.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
1.8
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
1.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
1.2
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
0.5
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
SMIM11 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
35.8
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
35.2
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
33.2
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
29.5
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
27.5
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
26.7
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
26.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
26.4
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
26.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
25.9
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
25.2
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
25.1
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
24.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
24.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
23.8
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
23.2
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
22.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.4
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
22.3
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
21.8
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
21.6
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
21.5
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
21.3
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
21.1
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
20.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
20.7
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
20.6
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
19.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
19.7
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
19.7
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
19.5
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
19.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
19.4
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
19.1
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
19.0
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
19.0
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
18.6
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
18.4
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
18.2
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
18.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
18.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.0
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
18.0
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
17.9
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
17.9
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
17.9
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
17.7
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.6
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
17.3
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
17.2
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
17.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
17.0
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
16.8
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
16.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.7
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
16.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
16.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
16.4
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.4
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
16.2
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
15.9
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
15.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
15.7
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
15.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.5
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
15.4
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
15.4
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
15.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
15.3
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
15.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
15.0
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
14.9
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
14.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
14.5
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
14.3
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
14.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
14.2
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
14.2
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
14.2
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
14.1
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
14.0
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
14.0
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.0
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.9
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
13.8
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
13.8
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
13.7
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
13.7
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
13.7
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
13.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
13.6
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
13.6
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
13.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
13.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
13.5
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
13.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
13.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
13.5
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
13.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
13.3
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
13.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
13.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.2
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.2
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
13.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
13.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
12.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.7
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
12.6
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
12.5
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
12.5
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
12.5
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
12.5
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
12.4
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
12.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
12.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
12.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
12.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
12.0
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
12.0
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
12.0
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
11.7
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
11.7
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
11.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
11.7
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
11.6
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.6
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
11.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
11.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
11.1
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
11.1
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
11.1
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
11.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
10.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
10.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
10.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
10.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
10.6
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
10.5
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
10.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
10.4
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
10.2
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
10.2
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
10.1
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
10.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
10.0
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
9.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
9.9
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.8
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
9.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
9.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
9.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
9.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
9.6
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
9.1
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
9.1
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
9.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.9
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
8.9
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
8.6
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
8.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
8.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
8.2
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
8.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
8.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
8.0
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.0
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
7.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
7.8
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
7.7
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
7.5
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
7.5
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
7.3
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.2
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
7.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
7.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
6.8
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
6.6
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
6.0
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
6.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
6.0
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
5.9
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
5.7
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.5
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
5.5
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
5.4
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
5.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
5.1
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
4.5
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.5
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
4.3
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
3.5
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
3.4
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
3.4
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
3.0
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
3.0
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
2.9
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
2.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
2.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
2.4
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
2.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
2.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
1.9
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
1.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
1.1
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1.1
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
0.4
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
0.2
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
0.2
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
0.1
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
0.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
0.0
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
0.0
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
0.0
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
