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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRR13 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
119.0
Number of samples
362
Samples
Sample
Description
TPM
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
719.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
415.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
338.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
337.3
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
315.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
295.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
291.7
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
277.0
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
273.2
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
263.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
261.3
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
258.8
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
258.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
257.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
230.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
223.7
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
220.7
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
219.6
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
213.9
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
210.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
210.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
207.6
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
207.2
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
205.8
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
205.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
205.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
203.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
202.1
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
200.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
196.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
194.2
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
186.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
180.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
180.3
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
177.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
177.1
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
177.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
175.1
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
173.0
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
168.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
167.1
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
164.9
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
162.1
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
161.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
161.5
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
161.3
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
160.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
160.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
159.6
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
159.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
159.1
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
157.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
157.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
156.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
153.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
152.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
152.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
152.5
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
151.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
150.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
150.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
150.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
149.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
148.9
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
148.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
147.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
147.5
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
147.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
147.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
146.6
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
146.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
146.4
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
146.4
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
144.6
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
142.8
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
141.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
141.9
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
141.5
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
140.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
139.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
138.9
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
138.8
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
137.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
137.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
137.3
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
137.1
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
137.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
136.7
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
134.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
133.9
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
133.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
133.6
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
133.2
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
132.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
132.1
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
132.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
131.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
130.7
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
130.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
129.1
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
129.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
128.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
128.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
128.5
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
127.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
127.4
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
126.1
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
125.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
125.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
125.5
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
125.2
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
124.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
124.9
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
124.8
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
124.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
124.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
124.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
123.9
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
123.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
123.7
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
122.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
122.9
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
122.7
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
122.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
121.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
121.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
120.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
120.9
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
120.6
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
120.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
120.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
120.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
120.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
120.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
120.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
119.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
119.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
119.2
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
119.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
118.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
118.7
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
118.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
117.5
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
116.6
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
116.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
115.9
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
115.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
115.5
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
115.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
115.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
115.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
114.0
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
113.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
113.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
113.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
113.0
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
112.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
111.2
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
110.7
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
109.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
109.5
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
109.4
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
109.3
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
108.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
108.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
108.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
108.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
108.1
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
106.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
106.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
105.9
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
105.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
105.5
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
105.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
105.2
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
105.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
105.1
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
105.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
104.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
104.6
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
104.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
104.6
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
104.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
104.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
104.4
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
103.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
103.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
103.5
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
103.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
103.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
103.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
102.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
102.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
102.6
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
102.6
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
102.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
102.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
102.4
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
102.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
101.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
101.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
101.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
101.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
101.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
101.2
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
101.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
100.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
100.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
100.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
99.7
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
99.7
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
99.6
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
99.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
99.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
97.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
97.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
97.5
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
97.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
97.4
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
97.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
97.3
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
97.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
96.8
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
96.6
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
96.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
95.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
95.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
94.9
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
94.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
94.6
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
94.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
93.7
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
93.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
93.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
93.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
93.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
93.4
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
93.3
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
92.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
92.6
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
92.4
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
92.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
92.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
91.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
91.8
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
91.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
91.7
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
91.7
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
90.9
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
90.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
90.7
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
90.5
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
90.2
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
90.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
90.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
89.7
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
89.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
89.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
89.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
89.4
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
89.2
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
88.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
87.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
87.5
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
87.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
87.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
87.1
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
86.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
86.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
86.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
86.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
85.9
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
85.7
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
85.7
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
85.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
84.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
84.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
83.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
83.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
83.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
83.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
83.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
82.8
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
82.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
82.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
81.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
81.7
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
81.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
81.3
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
81.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
81.1
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
80.8
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
80.6
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
79.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
79.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
79.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
79.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
79.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
78.3
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
78.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
77.9
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
77.9
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
77.3
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
77.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
77.1
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
77.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
76.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
76.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
76.6
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
76.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
75.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
75.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
75.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
74.9
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
74.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
74.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
74.1
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
73.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
73.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
72.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
72.3
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
72.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
72.0
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
71.8
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
71.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
71.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
71.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
70.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
70.6
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
70.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
69.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
68.9
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
68.6
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
68.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
68.3
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
68.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
66.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
66.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
66.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
65.7
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
65.7
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
65.4
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
65.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
64.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
63.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
61.5
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
60.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
60.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
60.7
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
59.2
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
59.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
58.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
58.4
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
57.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
57.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
53.2
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
52.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
51.4
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
47.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
46.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
46.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PRR13 is validated prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
89.2
Number of samples
231
Samples
Sample
Description
TPM
DO45297
0 years, female, NA, stage:4, dead, 1260 days
482.9
DO50785
0 years, male, NA, stage:4, dead, 90 days
299.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
276.1
DO45299
0 years, female, NA, stage:1, alive, 1440 days
272.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
259.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
249.6
DO50829
0 years, male, NA, stage:3, alive, 570 days
240.8
DO45285
0 years, male, NA, stage:3, alive, 480 days
240.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
206.4
DO45307
0 years, female, NA, stage:4, dead, 240 days
205.8
DO45277
0 years, male, NA, stage:3, alive, 600 days
201.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
196.2
DO23519
0 years, male, NA, stage:3, alive, 630 days
178.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
167.0
DO48723
0 years, male, NA, stage:1, alive, 600 days
166.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
165.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
154.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
151.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
147.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
147.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
139.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
136.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
134.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
132.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
131.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
131.4
DO23540
0 years, male, NA, stage:1, alive, 750 days
131.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
128.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
128.8
DO50799
0 years, female, NA, stage:2, alive, 540 days
128.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
128.7
DO45173
0 years, male, NA, stage:3, alive, 1170 days
128.4
DO23526
0 years, male, NA, stage:3, alive, 1050 days
126.5
DO45269
0 years, male, NA, stage:3, alive, 750 days
125.8
DO45211
0 years, male, NA, stage:3, alive, 240 days
124.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
123.3
DO45273
0 years, male, NA, stage:2, alive, 480 days
122.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
120.6
DO45289
0 years, female, NA, stage:3, alive, 360 days
120.0
DO50839
0 years, female, NA, stage:3, alive, 330 days
117.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
114.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
110.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
110.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
108.9
DO48717
0 years, male, NA, stage:4, dead, 180 days
108.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
108.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
108.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
107.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
107.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
107.3
DO23521
0 years, male, NA, stage:3, alive, 1110 days
106.9
DO45223
0 years, male, NA, stage:4, alive, 1020 days
104.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
103.9
DO23512
0 years, male, NA, stage:1, alive, 1260 days
102.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
102.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
99.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
98.7
DO23552
0 years, female, NA, stage:1, alive, 810 days
98.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
97.7
DO45093
0 years, male, NA, stage:2, dead, 720 days
96.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
96.0
DO48720
0 years, female, NA, stage:2, alive, 570 days
95.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
93.5
DO23549
0 years, male, NA, stage:3, alive, 990 days
93.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
93.0
DO23535
0 years, male, NA, stage:1, alive, 960 days
93.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
91.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
90.9
DO45193
0 years, female, NA, stage:4, dead, 120 days
90.9
DO45165
0 years, male, NA, stage:2, alive, 690 days
90.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
90.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
89.3
DO50809
0 years, male, NA, stage:3, dead, 720 days
88.7
DO45265
0 years, male, NA, stage:3, alive, 1020 days
88.3
DO50802
0 years, male, NA, stage:2, alive, 930 days
88.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
88.2
DO45135
0 years, male, NA, stage:1, alive, 1410 days
88.1
DO50776
0 years, male, NA, stage:1, alive, 690 days
87.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
86.4
DO48751
0 years, male, NA, stage:2, dead, 480 days
86.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
86.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
85.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
85.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
85.1
DO23514
0 years, male, NA, stage:2, alive, 1290 days
85.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
84.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
83.9
DO45279
0 years, male, NA, stage:3, alive, 1290 days
83.7
DO45149
0 years, female, NA, stage:2, alive, 1260 days
83.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
83.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
83.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
82.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
82.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
81.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
80.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
80.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
80.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
80.4
DO50803
0 years, female, NA, stage:1, alive, 540 days
80.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
80.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
80.1
DO50783
0 years, male, NA, stage:3, alive, 480 days
79.7
DO23546
0 years, male, NA, stage:2, alive, 1050 days
79.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
79.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
78.6
DO23539
0 years, male, NA, stage:1, alive, 1110 days
78.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
78.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
78.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
77.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
77.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
77.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
77.2
DO48704
0 years, female, NA, stage:3, alive, 750 days
77.1
DO48736
0 years, female, NA, stage:1, alive, 600 days
77.1
DO48725
0 years, male, NA, stage:1, alive, 780 days
77.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
76.9
DO23513
0 years, male, NA, stage:3, alive, 1200 days
76.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
76.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
75.1
DO48759
0 years, male, NA, stage:3, alive, 720 days
75.0
DO50850
0 years, male, NA, stage:3, alive, 720 days
74.9
DO48715
0 years, female, NA, stage:2, dead, 690 days
74.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
74.4
DO23509
0 years, male, NA, stage:3, dead, 780 days
74.3
DO48672
0 years, male, NA, stage:2, alive, 450 days
74.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
73.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
73.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
73.3
DO48706
0 years, male, NA, stage:2, alive, 870 days
72.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
72.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
72.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
72.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
72.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
71.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
71.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
71.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
71.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
70.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
70.5
DO45227
0 years, female, NA, stage:2, alive, 1020 days
69.9
DO23543
0 years, male, NA, stage:2, alive, 1020 days
69.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
69.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
69.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
68.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
68.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
68.3
DO45091
0 years, male, NA, stage:2, dead, 1320 days
68.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
67.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
67.8
DO50857
0 years, male, NA, stage:2, alive, 210 days
67.5
DO48695
0 years, male, NA, stage:2, alive, 720 days
67.4
DO50814
0 years, male, NA, stage:3, alive, 420 days
67.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
67.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
67.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
66.7
DO45097
0 years, male, NA, stage:3, alive, 1620 days
66.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
66.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
66.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
65.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
64.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
63.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
63.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
63.2
DO48719
0 years, male, NA, stage:2, alive, 690 days
63.1
DO23529
0 years, male, NA, stage:4, alive, 930 days
62.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
62.5
DO23550
0 years, male, NA, stage:1, alive, 990 days
62.2
DO45099
0 years, male, NA, stage:3, alive, 1590 days
62.0
DO45113
0 years, male, NA, stage:3, alive, 1560 days
61.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
61.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
61.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
60.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
60.7
DO45167
0 years, male, NA, stage:2, dead, 1440 days
60.4
DO45169
0 years, male, NA, stage:3, alive, 1350 days
60.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
59.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
59.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
59.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
59.3
DO23551
0 years, male, NA, stage:3, dead, 150 days
59.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
59.1
DO45121
0 years, male, NA, stage:3, alive, 1530 days
59.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
58.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
58.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
58.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
57.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
56.9
DO23528
0 years, female, NA, stage:2, alive, 1020 days
56.8
DO50817
0 years, male, NA, stage:2, alive, 390 days
56.3
DO50804
0 years, male, NA, stage:2, alive, 720 days
56.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
56.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
55.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
55.2
DO45261
0 years, male, NA, stage:3, alive, 990 days
54.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
54.7
DO23534
0 years, male, NA, stage:2, alive, 840 days
54.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
54.4
DO45155
0 years, male, NA, stage:2, alive, 2160 days
54.1
DO45133
0 years, male, NA, stage:3, dead, 660 days
53.7
DO50844
0 years, male, NA, stage:4, alive, 300 days
53.3
DO45259
0 years, male, NA, stage:3, alive, 330 days
53.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
53.2
DO23544
0 years, male, NA, stage:2, alive, 960 days
52.0
DO45213
0 years, male, NA, stage:1, alive, 1200 days
50.5
DO23548
0 years, female, NA, stage:1, alive, 840 days
49.9
DO45129
0 years, male, NA, stage:3, alive, 1470 days
49.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
49.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
48.7
DO45215
0 years, male, NA, stage:2, alive, 1170 days
48.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
48.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
47.8
DO45123
0 years, female, NA, stage:2, dead, 570 days
47.6
DO23532
0 years, female, NA, stage:1, alive, 960 days
47.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
46.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
46.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
45.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
45.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
45.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
44.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
44.2
DO50807
0 years, male, NA, stage:1, alive, 540 days
44.1
DO45195
0 years, male, NA, stage:1, alive, 390 days
44.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
41.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
39.2
DO45117
0 years, female, NA, stage:2, dead, 1110 days
38.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
37.3
DO45197
0 years, male, NA, stage:2, alive, 1170 days
37.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
35.2
DO45125
0 years, male, NA, stage:3, alive, 1680 days
34.9
DO45237
0 years, male, NA, stage:2, alive, 900 days
32.1
DO23538
0 years, male, NA, stage:2, alive, 450 days
29.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
