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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCTN1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.2
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
14.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
13.7
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
10.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
9.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
8.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
8.1
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
6.9
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
6.2
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
5.4
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
5.1
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
4.8
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
4.7
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
4.7
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
4.1
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
4.0
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
3.9
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
3.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
3.8
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
3.8
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
3.7
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
3.7
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
3.6
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
3.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
3.5
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
3.5
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
3.3
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
3.2
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
3.2
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
3.1
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
3.0
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
2.9
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
2.9
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
2.8
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.7
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
2.5
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
2.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
2.4
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
2.4
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
2.3
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
2.3
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
2.2
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
2.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
2.0
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
2.0
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
2.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
1.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
1.7
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
1.5
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
1.5
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
1.4
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
1.3
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
1.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.6
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCTN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.8
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
27.9
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
26.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
24.4
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
24.1
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
23.9
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
23.5
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
23.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
22.5
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
22.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
21.8
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
21.5
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
21.2
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
20.5
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
20.5
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
19.7
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
19.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
19.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
19.2
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
19.0
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
19.0
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
18.9
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
18.9
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
18.8
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
18.8
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
18.7
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
18.6
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
18.5
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
18.5
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
18.3
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
18.1
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
18.1
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
18.1
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
18.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
17.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
17.7
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
17.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
17.4
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
17.3
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.3
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
17.0
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
16.5
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
16.5
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
16.4
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
16.4
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
16.4
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.2
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
16.2
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
16.1
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
16.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
16.0
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
16.0
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
15.8
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
15.8
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
15.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
15.7
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
15.7
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
15.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
15.3
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
15.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
15.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
15.2
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
15.2
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
15.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
15.1
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
15.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.1
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
15.0
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
15.0
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
15.0
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
15.0
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
14.6
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
14.6
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
14.5
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
14.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
14.4
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
14.4
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
14.3
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
14.3
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
14.1
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
14.1
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
14.1
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
14.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
14.1
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
13.9
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
13.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
13.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
13.8
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
13.8
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
13.8
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
13.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
13.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
13.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
13.7
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
13.6
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
13.6
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
13.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
13.5
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
13.5
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
13.4
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
13.4
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
13.4
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
13.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
13.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
13.1
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
13.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
13.0
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
13.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
13.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
13.0
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
13.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
12.9
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
12.6
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
12.5
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
12.5
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
12.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
12.5
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
12.5
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
12.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
12.4
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.4
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
12.4
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
12.4
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
12.4
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
12.3
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
12.3
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
12.2
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
12.2
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
12.2
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
12.2
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
12.1
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
12.0
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
12.0
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.0
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
12.0
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
11.9
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
11.8
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
11.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
11.7
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.7
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
11.7
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
11.6
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
11.6
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
11.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
11.6
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
11.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
11.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
11.5
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
11.5
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
11.5
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
11.4
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
11.4
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
11.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
11.4
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
11.4
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
11.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
11.3
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
11.3
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
11.3
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
11.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
11.3
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
11.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
11.2
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
11.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
11.2
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
11.2
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
11.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
11.1
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
11.1
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.1
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
11.1
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
11.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
11.0
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
11.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
10.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.9
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
10.9
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
10.8
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
10.8
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
10.7
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
10.7
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
10.7
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
10.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
10.7
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
10.7
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
10.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
10.6
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
10.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
10.5
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
10.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
10.5
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
10.5
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
10.4
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
10.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
10.4
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
10.4
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
10.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
10.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
10.3
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
10.3
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
10.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
10.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
10.2
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
10.2
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
10.2
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
10.2
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
10.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
10.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
10.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
10.0
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
10.0
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
10.0
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
10.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
9.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
9.9
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.9
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
9.8
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
9.8
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
9.8
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
9.8
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
9.8
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
9.7
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
9.7
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
9.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
9.7
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
9.7
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
9.7
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
9.7
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
9.7
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
9.6
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
9.6
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
9.6
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
9.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.6
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
9.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
9.6
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
9.5
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
9.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
9.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
9.4
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
9.4
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.4
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
9.4
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
9.4
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
9.4
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
9.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
9.3
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
9.3
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
9.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
9.3
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
9.3
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
9.3
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
9.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
9.2
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
9.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
9.2
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
9.1
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
9.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
9.1
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
9.1
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
9.1
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
9.0
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
9.0
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
8.9
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
8.9
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
8.9
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
8.9
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
8.9
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
8.9
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
8.9
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
8.8
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
8.8
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
8.8
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
8.8
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
8.7
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
8.7
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
8.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
8.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
8.6
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
8.6
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
8.6
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
8.5
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
8.5
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
8.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
8.5
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
8.5
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
8.4
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
8.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
8.4
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
8.4
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
8.4
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
8.4
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
8.3
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
8.3
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
8.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
8.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
8.3
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
8.2
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
8.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
8.2
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
8.2
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
8.2
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
8.2
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
8.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
8.2
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
8.1
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
8.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
8.0
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
8.0
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
8.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
8.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
8.0
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
8.0
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
7.9
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
7.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
7.9
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
7.9
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
7.9
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
7.9
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
7.9
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
7.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
7.8
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
7.8
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
7.8
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
7.8
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
7.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
7.7
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
7.7
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
7.7
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
7.6
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
7.6
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
7.6
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
7.6
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
7.6
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
7.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
7.6
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
7.5
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
7.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
7.5
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
7.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
7.5
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
7.5
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
7.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
7.4
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
7.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
7.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
7.4
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
7.4
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
7.4
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
7.4
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
7.4
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
7.4
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
7.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
7.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
7.4
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
7.3
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
7.3
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
7.3
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
7.3
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
7.2
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
7.2
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
7.2
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
7.2
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
7.2
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
7.2
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
7.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
7.1
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
7.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
7.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
7.1
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
7.1
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
7.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.1
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
7.0
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
7.0
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
7.0
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
7.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
6.9
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
6.9
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
6.9
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
6.9
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
6.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
6.8
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
6.8
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
6.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
6.8
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
6.8
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
6.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
6.7
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
6.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
6.7
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
6.7
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
6.7
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
6.6
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
6.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
6.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
6.6
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
6.6
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
6.6
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
6.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
6.5
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
6.5
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
6.5
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
6.5
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
6.4
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
6.4
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
6.4
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
6.4
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
6.3
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
6.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
6.2
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
6.2
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
6.2
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
6.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
6.2
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
6.2
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
6.1
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
6.1
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
6.1
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
6.1
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
6.1
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
6.1
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
6.1
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.1
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
6.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
6.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
6.1
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
6.0
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.0
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
6.0
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
6.0
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
5.9
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
5.9
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
5.9
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
5.9
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
5.9
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
5.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
5.9
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
5.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
5.7
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
5.7
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
5.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
5.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
5.5
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
5.5
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
5.5
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
5.5
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
5.5
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
5.4
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
5.4
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
5.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
5.4
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
5.4
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
5.4
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
5.3
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
5.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
5.3
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
5.2
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
5.2
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
5.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
5.2
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
5.2
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
5.1
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
5.1
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
5.0
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
5.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
5.0
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
4.8
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
4.8
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
4.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
4.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
4.7
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
4.6
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
4.6
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
4.6
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
4.6
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.6
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
4.6
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
4.4
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
4.4
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
4.4
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
4.4
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
4.4
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
4.3
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
4.3
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
4.3
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
4.2
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
4.2
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
4.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
4.1
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
4.0
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
4.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
3.9
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
3.8
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
3.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
3.7
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
3.6
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
3.4
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.4
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
3.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
3.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
3.1
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
3.1
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
3.0
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
3.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
2.8
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
2.7
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
2.6
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
2.6
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
2.5
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
2.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
2.3
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
2.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
2.3
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
2.2
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
2.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
2.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
1.9
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCTN1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.6
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
53.5
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
45.6
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
38.6
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
37.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
36.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
35.9
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
34.7
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
34.6
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
33.7
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
33.2
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
32.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
31.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
31.5
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
31.1
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
30.5
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
29.5
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
28.9
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
27.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
27.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
27.3
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
27.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
26.3
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
25.2
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
24.9
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
24.7
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
24.7
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
23.2
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
23.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
22.8
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
22.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
22.5
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
22.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
22.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
22.3
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
22.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
22.0
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
21.5
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
21.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
21.3
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
21.2
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
20.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
20.4
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
20.2
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
20.1
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
20.1
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
19.8
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
19.4
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
18.8
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
18.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
18.5
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
18.3
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
18.1
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
18.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
17.9
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
17.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
17.4
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
16.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
16.7
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
16.6
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
16.3
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.3
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
16.3
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
16.1
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
15.9
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
15.9
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
15.8
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
15.6
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
15.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
15.5
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.4
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
15.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
15.4
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
15.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
15.3
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
15.1
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
15.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
14.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
14.5
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
13.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
13.6
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
13.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.5
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
13.4
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
13.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
13.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.3
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
13.1
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
13.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
12.5
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
12.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
11.9
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
11.6
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
11.2
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
10.3
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
10.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
8.6
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
7.2
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TCTN1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
15.3
Number of samples
282
Samples
Sample
Description
TPM
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
57.8
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
55.8
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
54.3
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
50.6
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
48.9
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
42.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
39.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
39.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
38.8
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
37.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
36.4
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
34.2
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
34.0
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
32.9
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
31.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
30.2
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
30.1
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
30.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
29.7
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
29.6
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
28.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
28.7
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
28.3
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
27.8
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
27.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
27.2
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
27.2
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
27.0
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
26.9
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
26.6
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
26.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
26.5
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
26.5
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.9
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
25.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
25.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
25.1
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
25.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
24.3
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
24.0
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
24.0
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
23.9
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.8
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
23.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
23.4
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
23.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
22.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
22.8
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
22.8
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
22.6
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
22.5
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
22.5
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
22.3
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
22.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
22.1
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
21.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
21.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
21.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
21.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
21.6
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
21.3
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
21.1
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
20.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
20.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
20.4
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
20.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
20.3
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
20.2
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
20.0
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
19.9
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
19.8
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
19.6
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
19.3
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
19.0
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
18.9
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
18.8
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
18.7
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
18.7
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
18.4
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
18.2
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
18.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
18.0
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
17.9
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.9
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
17.8
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
17.7
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
17.6
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
17.6
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
17.5
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
17.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
17.4
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
17.4
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
17.3
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
17.3
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
17.2
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
17.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
17.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
17.0
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
17.0
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
16.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
16.7
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
16.7
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
16.6
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
16.6
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
16.3
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
16.3
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
16.2
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
16.1
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
16.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
16.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
16.0
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
16.0
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
15.9
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
15.8
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
15.8
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
15.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
15.6
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
15.4
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
15.4
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
15.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
15.2
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
15.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
15.1
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
15.0
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
15.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
15.0
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
14.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
14.6
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
14.5
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
14.4
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
14.4
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
14.4
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
14.3
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
14.2
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
14.2
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
14.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
14.1
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
14.0
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.0
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.0
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
14.0
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
14.0
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
13.9
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
13.9
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
13.9
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
13.8
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
13.8
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
13.8
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
13.7
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
13.7
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
13.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
13.6
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
13.6
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
13.5
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
13.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
13.3
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
13.3
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
13.3
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
13.3
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
13.2
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
13.1
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
13.1
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.0
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
13.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
12.9
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
12.9
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
12.8
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
12.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
12.7
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
12.7
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
12.7
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
12.6
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
12.5
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
12.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
12.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
12.4
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
12.4
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
12.2
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
12.0
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
12.0
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
11.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
11.9
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
11.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
11.9
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
11.8
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
11.7
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
11.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
11.5
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
11.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
11.3
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
11.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
11.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
11.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
11.1
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
10.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
10.6
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
10.6
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
10.5
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
10.5
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
10.5
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
10.3
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
10.2
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
10.0
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
10.0
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
9.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
9.6
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
9.5
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
9.5
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
9.3
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
9.3
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
9.3
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
8.8
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
8.7
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.7
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
8.7
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
8.6
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
8.6
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
8.5
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
8.5
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
8.5
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
8.5
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
8.2
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
8.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
7.9
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
7.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
7.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
7.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
7.7
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
7.6
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
7.6
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
7.5
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
7.4
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
7.4
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
7.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
7.2
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
7.1
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
7.1
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
6.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
6.8
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
6.8
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
6.5
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
6.4
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
6.2
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
5.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
5.8
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
5.7
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
5.0
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
4.9
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
4.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
4.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
4.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.3
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
4.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
4.1
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
3.8
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
3.6
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
3.4
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
2.5
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
2.0
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
1.2
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.9
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
0.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
0.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
0.0
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
0.0
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
0.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0078510003
Tumor
3.4
CPT0007860003
Tumor
2.0
CPT0066470004
Tumor
1.8
CPT0011410003
Tumor
1.1
CPT0086950003
Tumor
1.0
CPT0025290003
Tumor
0.9
CPT0023690003
Tumor
0.9
CPT0078800003
Tumor
0.7
CPT0015910003
Tumor
0.6
CPT0025170003
Tumor
0.6
CPT0015730003
Tumor
0.6
CPT0063630003
Tumor
0.6
CPT0002350011
Tumor
0.5
CPT0063320003
Tumor
0.5
CPT0006630003
Tumor
0.5
CPT0001500009
Tumor
0.5
CPT0065750003
Tumor
0.5
CPT0017850003
Tumor
0.5
CPT0079230003
Tumor
0.4
CPT0025230003
Tumor
0.4
CPT0069160003
Tumor
0.4
CPT0065690003
Tumor
0.4
CPT0021240003
Tumor
0.3
CPT0084590001
Normal
0.3
CPT0010120001
Normal
0.3
CPT0001340003
Tumor
0.3
CPT0025050003
Tumor
0.3
CPT0012640003
Normal
0.3
CPT0012670003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0012290003
Normal
0.3
CPT0065930003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0019990003
Tumor
0.3
CPT0025580004
Tumor
0.3
CPT0092790003
Tumor
0.3
CPT0000660001
Normal
0.3
CPT0014130001
Normal
0.3
CPT0081600003
Tumor
0.3
CPT0006730001
Normal
0.3
CPT0092310003
Normal
0.2
CPT0025060001
Normal
0.2
CPT0006440003
Tumor
0.2
CPT0024680001
Normal
0.2
CPT0088760003
Tumor
0.2
CPT0086820003
Tumor
0.2
CPT0009060003
Tumor
0.2
CPT0075560003
Tumor
0.2
CPT0078930003
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0014450004
Tumor
0.2
CPT0020120003
Tumor
0.1
CPT0085670003
Tumor
0.1
CPT0081620001
Normal
0.1
CPT0025920001
Normal
0.1
CPT0002370001
Normal
0.1
CPT0078670001
Normal
0.1
CPT0066430001
Normal
0.1
CPT0026420001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0015810003
Tumor
0.1
CPT0086360003
Tumor
0.1
CPT0066520001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0075570001
Normal
0.1
CPT0079300001
Normal
0.1
CPT0079380003
Tumor
0.1
CPT0065820001
Normal
0.1
CPT0079270003
Tumor
0.1
CPT0063640001
Normal
0.1
CPT0014160003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0089460004
Tumor
0.1
CPT0069190001
Normal
0.1
CPT0065810003
Tumor
0.1
CPT0078840001
Normal
0.1
CPT0086030003
Tumor
0.1
CPT0092290003
Tumor
0.0
CPT0000790001
Normal
0.0
CPT0064370003
Tumor
0.0
CPT0001510001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0012280003
Tumor
0.0
CPT0088710001
Normal
0.0
CPT0014470001
Normal
0.0
CPT0086370003
Normal
0.0
CPT0077490003
Tumor
0.0
CPT0092190003
Normal
0.0
CPT0076330003
Tumor
0.0
CPT0088920001
Normal
0.0
CPT0009020003
Normal
0.0
CPT0088780001
Normal
0.0
CPT0077310003
Tumor
0.0
CPT0092740003
Normal
0.0
CPT0092800003
Normal
0.0
CPT0020130001
Normal
0.0
CPT0006900003
Tumor
0.0
CPT0088970003
Tumor
0.0
CPT0012920003
Normal
0.0
CPT0025610001
Normal
0.0
CPT0012090003
Normal
0.0
CPT0018250001
Normal
0.0
CPT0001350001
Normal
0.0
CPT0009080003
Normal
-0.1
CPT0084560003
Tumor
-0.1
CPT0075130003
Tumor
-0.1
CPT0023350003
Tumor
-0.1
CPT0001220008
Tumor
-0.1
CPT0010170001
Normal
-0.1
CPT0020020001
Normal
-0.1
CPT0023710001
Normal
-0.1
CPT0077140001
Normal
-0.1
CPT0071150004
Tumor
-0.1
CPT0006950001
Normal
-0.1
CPT0077320001
Normal
-0.1
CPT0088570001
Normal
-0.1
CPT0001550001
Normal
-0.1
CPT0065450001
Normal
-0.1
CPT0000640003
Tumor
-0.1
CPT0063330001
Normal
-0.1
CPT0010160003
Tumor
-0.2
CPT0011240003
Tumor
-0.2
CPT0023360001
Normal
-0.2
CPT0081880003
Tumor
-0.2
CPT0076350001
Normal
-0.2
CPT0069010001
Normal
-0.2
CPT0012770003
Normal
-0.2
CPT0078530001
Normal
-0.2
CPT0017410003
Tumor
-0.2
CPT0088640003
Normal
-0.2
CPT0025110003
Tumor
-0.2
CPT0088690003
Tumor
-0.2
CPT0086830003
Normal
-0.2
CPT0013790003
Normal
-0.2
CPT0001270001
Normal
-0.2
CPT0079410003
Tumor
-0.2
CPT0012900004
Tumor
-0.2
CPT0089020003
Tumor
-0.2
CPT0025350003
Tumor
-0.2
CPT0064400001
Normal
-0.2
CPT0078940001
Normal
-0.2
CPT0066480003
Tumor
-0.2
CPT0081990003
Tumor
-0.3
CPT0000870016
Tumor
-0.3
CPT0017450001
Normal
-0.3
CPT0089480003
Normal
-0.3
CPT0086970003
Normal
-0.3
CPT0065870003
Tumor
-0.3
CPT0089040001
Normal
-0.3
CPT0007470001
Normal
-0.3
CPT0010110003
Tumor
-0.3
CPT0006530001
Normal
-0.3
CPT0002270011
Tumor
-0.3
CPT0079430001
Normal
-0.3
CPT0012550003
Tumor
-0.3
CPT0012570003
Normal
-0.4
CPT0075170001
Normal
-0.4
CPT0092160003
Tumor
-0.4
CPT0087050003
Normal
-0.4
CPT0088900003
Tumor
-0.4
CPT0000890001
Normal
-0.4
CPT0087040003
Tumor
-0.4
CPT0075720003
Tumor
-0.4
CPT0012180003
Tumor
-0.4
CPT0026410003
Tumor
-0.5
CPT0088500001
Normal
-0.5
CPT0088630003
Tumor
-0.5
CPT0078660003
Tumor
-0.5
CPT0019130003
Tumor
-0.5
CPT0086890003
Normal
-0.5
CPT0079480003
Tumor
-0.5
CPT0014350001
Normal
-0.5
CPT0078830003
Tumor
-0.5
CPT0001540009
Tumor
-0.6
CPT0079000001
Normal
-0.6
CPT0019160001
Normal
-0.6
CPT0001260009
Tumor
-0.6
CPT0088550004
Tumor
-0.6
CPT0079510001
Normal
-0.6
CPT0001190001
Normal
-0.6
CPT0082010001
Normal
-0.6
CPT0007870001
Normal
-0.6
CPT0000780007
Tumor
-0.7
CPT0077110003
Tumor
-0.7
CPT0014370004
Tumor
-0.7
CPT0088480003
Tumor
-0.7
CPT0012370003
Tumor
-0.7
CPT0079180003
Tumor
-0.8
CPT0086870003
Tumor
-0.8
CPT0065430003
Tumor
-0.8
CPT0078990003
Tumor
-0.9
CPT0007320003
Tumor
-1.2
CPT0001180009
Tumor
-1.3
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
