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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP1R11 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
61.6
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
59.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
50.5
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
50.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
48.0
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
45.4
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
44.3
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
44.2
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
43.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
43.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
43.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
42.8
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
40.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
39.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
39.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
37.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
37.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
35.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
33.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
31.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
30.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
30.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
30.4
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
30.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
30.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
29.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
29.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
29.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
29.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
28.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
28.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
27.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
25.4
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
25.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
23.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
23.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
22.8
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
22.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
22.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
22.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
21.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
21.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
21.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
20.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
20.9
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
20.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
19.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
19.8
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
18.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
17.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
17.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
17.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
17.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
17.0
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
16.9
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
15.9
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
15.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
15.4
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
15.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
15.1
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
14.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
14.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
14.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
13.7
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
13.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
13.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
13.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
12.7
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
12.6
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
12.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
12.0
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
11.9
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
11.8
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
11.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
11.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
11.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
11.0
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
10.9
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
10.3
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
10.1
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
9.9
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.7
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
9.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
9.4
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.3
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
9.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
9.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
8.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.7
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
8.7
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
8.6
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
8.6
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
8.5
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
8.5
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
8.1
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
7.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
7.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
7.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
7.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
7.5
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
7.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
7.3
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
7.3
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
7.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.6
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
6.5
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
6.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
6.1
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
6.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
6.0
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
5.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
5.5
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
5.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
5.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
5.3
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
5.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
5.3
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
5.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
4.5
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
4.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
4.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
4.0
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
4.0
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
3.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
3.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
3.5
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
3.4
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
3.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
3.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
3.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
2.9
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
2.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
2.7
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
2.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
2.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
2.6
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
2.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
2.2
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
2.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
2.2
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
2.2
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
2.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
1.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
1.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
1.7
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
1.6
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
1.4
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1.3
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
1.3
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
1.2
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
1.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
1.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
1.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
1.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
1.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
0.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
0.9
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
0.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
0.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
0.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
0.8
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
0.7
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
0.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
0.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
0.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
0.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
0.6
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
0.6
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
0.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.5
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
0.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
0.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
0.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
0.5
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
0.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
0.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
0.4
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
0.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
0.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
0.3
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
0.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
0.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
0.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
0.3
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
0.2
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
0.2
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
0.2
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
0.1
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
0.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
0.0
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
0.0
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
0.0
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
0.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
0.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
0.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
0.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
0.0
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
0.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
0.0
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
0.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
0.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
0.0
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
0.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
0.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
0.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
0.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
0.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
0.0
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
0.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
0.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
0.0
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
0.0
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
0.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
0.0
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
0.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
0.0
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
0.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
0.0
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
0.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
0.0
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
0.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
0.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
0.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
0.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
0.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
0.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.0
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
0.0
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
0.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
0.0
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.0
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
0.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
0.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
0.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.0
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
0.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
0.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.0
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.0
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.0
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
0.0
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.0
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
0.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
0.0
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
0.0
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
0.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
0.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
0.0
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.0
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
0.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.0
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
0.0
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
0.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.0
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
0.0
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
0.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
0.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
0.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.0
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
0.0
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
0.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
0.0
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.0
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
0.0
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
0.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.0
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
0.0
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
0.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
0.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
0.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
0.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.0
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
0.0
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
0.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
0.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
0.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
0.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
0.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.0
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
0.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
0.0
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
0.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
0.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
0.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
0.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
0.0
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
0.0
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
0.0
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
0.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
0.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
0.0
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
0.0
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
0.0
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
0.0
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
0.0
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
0.0
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
0.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
0.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
0.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
0.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
0.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
0.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
0.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
0.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
0.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
0.0
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
0.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
0.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
0.0
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
0.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
0.0
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
0.0
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
0.0
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
0.0
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
0.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
PPP1R11 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
43.3
Number of samples
231
Samples
Sample
Description
TPM
DO45185
0 years, male, NA, stage:2, alive, 600 days
136.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
129.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
116.8
DO23528
0 years, female, NA, stage:2, alive, 1020 days
94.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
93.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
87.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
85.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
84.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
80.2
DO45299
0 years, female, NA, stage:1, alive, 1440 days
79.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
78.5
DO45097
0 years, male, NA, stage:3, alive, 1620 days
77.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
77.6
DO45205
0 years, female, NA, stage:2, dead, 90 days
74.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
72.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
71.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
71.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
71.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
70.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
70.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
68.0
DO48672
0 years, male, NA, stage:2, alive, 450 days
67.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
67.8
DO45255
0 years, male, NA, stage:3, alive, 720 days
67.3
DO23539
0 years, male, NA, stage:1, alive, 1110 days
66.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
66.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
65.6
DO23519
0 years, male, NA, stage:3, alive, 630 days
65.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
63.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
62.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
62.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
61.8
DO48717
0 years, male, NA, stage:4, dead, 180 days
60.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
60.5
DO50808
0 years, male, NA, stage:2, alive, 570 days
60.3
DO23526
0 years, male, NA, stage:3, alive, 1050 days
60.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
60.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
58.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
58.2
DO45297
0 years, female, NA, stage:4, dead, 1260 days
58.1
DO50850
0 years, male, NA, stage:3, alive, 720 days
57.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
56.8
DO48697
0 years, female, NA, stage:2, dead, 810 days
56.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
55.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
55.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
55.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
54.5
DO23537
0 years, male, NA, stage:2, dead, 900 days
54.3
DO45179
0 years, female, NA, stage:2, alive, 600 days
54.2
DO45209
0 years, male, NA, stage:4, alive, 1350 days
53.6
DO48701
0 years, male, NA, stage:2, alive, 780 days
53.4
DO23508
0 years, female, NA, stage:2, alive, 390 days
53.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
53.2
DO45227
0 years, female, NA, stage:2, alive, 1020 days
53.0
DO23516
0 years, male, NA, stage:3, dead, 20 days
53.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
52.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
51.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
51.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
50.9
DO48759
0 years, male, NA, stage:3, alive, 720 days
50.9
DO45273
0 years, male, NA, stage:2, alive, 480 days
50.9
DO50778
0 years, male, NA, stage:4, alive, 630 days
50.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
50.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
49.8
DO45229
0 years, male, NA, stage:1, alive, 990 days
49.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
49.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
49.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
48.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
48.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
48.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
47.9
DO45225
0 years, male, NA, stage:1, alive, 1050 days
47.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
47.3
DO45247
0 years, female, NA, stage:2, alive, 210 days
47.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
47.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
46.7
DO45307
0 years, female, NA, stage:4, dead, 240 days
46.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
45.7
DO45197
0 years, male, NA, stage:2, alive, 1170 days
45.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
45.4
DO45285
0 years, male, NA, stage:3, alive, 480 days
45.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
45.3
DO23552
0 years, female, NA, stage:1, alive, 810 days
45.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
45.1
DO23513
0 years, male, NA, stage:3, alive, 1200 days
44.8
DO45257
0 years, male, NA, stage:3, alive, 810 days
44.7
DO23550
0 years, male, NA, stage:1, alive, 990 days
44.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
43.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
43.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
43.9
DO50825
0 years, male, NA, stage:2, alive, 390 days
43.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
43.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
42.8
DO50785
0 years, male, NA, stage:4, dead, 90 days
42.4
DO45283
0 years, male, NA, stage:3, alive, 510 days
42.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
42.0
DO48728
0 years, female, NA, stage:2, alive, 150 days
41.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
41.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
41.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
41.7
DO45219
0 years, male, NA, stage:2, alive, 1080 days
41.6
DO45193
0 years, female, NA, stage:4, dead, 120 days
41.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
41.0
DO45275
0 years, male, NA, stage:3, dead, 10 days
40.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
40.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
40.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
40.2
DO45173
0 years, male, NA, stage:3, alive, 1170 days
39.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
39.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
39.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
39.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
39.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
39.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
39.3
DO50798
0 years, male, NA, stage:3, dead, 30 days
39.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
39.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
38.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
38.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
38.7
DO45221
0 years, female, NA, stage:4, dead, 390 days
38.6
DO45243
0 years, female, NA, stage:3, alive, 930 days
38.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
38.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
38.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
38.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
38.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
38.1
DO50789
0 years, female, NA, stage:2, alive, 570 days
37.9
DO45251
0 years, female, NA, stage:2, alive, 900 days
37.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
37.7
DO45207
0 years, male, NA, stage:1, alive, 1050 days
37.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
37.5
DO50822
0 years, male, NA, stage:2, alive, 510 days
37.4
DO45141
0 years, male, NA, stage:2, alive, 1320 days
37.4
DO48712
0 years, male, NA, stage:2, alive, 810 days
37.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
37.0
DO45239
0 years, male, NA, stage:2, alive, 870 days
37.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
36.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
36.5
DO23541
0 years, male, NA, stage:2, alive, 930 days
36.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
36.0
DO23530
0 years, male, NA, stage:4, dead, 180 days
35.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
35.7
DO48721
0 years, female, NA, stage:1, alive, 900 days
35.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
35.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
35.4
DO45259
0 years, male, NA, stage:3, alive, 330 days
35.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
35.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
34.8
DO50818
0 years, male, NA, stage:2, alive, 510 days
34.7
DO50807
0 years, male, NA, stage:1, alive, 540 days
34.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
34.6
DO48720
0 years, female, NA, stage:2, alive, 570 days
34.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
34.4
DO45127
0 years, male, NA, stage:3, dead, 420 days
34.3
DO48742
0 years, male, NA, stage:2, alive, 600 days
34.3
DO45149
0 years, female, NA, stage:2, alive, 1260 days
34.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
34.1
DO50817
0 years, male, NA, stage:2, alive, 390 days
34.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
34.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
34.0
DO45281
0 years, male, NA, stage:4, alive, 750 days
33.8
DO23511
0 years, female, NA, stage:3, dead, 180 days
33.8
DO48715
0 years, female, NA, stage:2, dead, 690 days
33.3
DO45213
0 years, male, NA, stage:1, alive, 1200 days
33.2
DO45199
0 years, female, NA, stage:2, alive, 1350 days
33.0
DO227801
0 years, female, NA, stage:1, alive, 660 days
32.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
32.6
DO48700
0 years, female, NA, stage:2, alive, 810 days
32.5
DO45233
0 years, male, NA, stage:3, alive, 900 days
32.0
DO45253
0 years, male, NA, stage:2, alive, 870 days
31.9
DO50840
0 years, male, NA, stage:2, alive, 330 days
31.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
31.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
31.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
31.1
DO23534
0 years, male, NA, stage:2, alive, 840 days
31.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
31.0
DO50859
0 years, male, NA, stage:2, alive, 180 days
31.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
31.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
30.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
30.8
DO45115
0 years, male, NA, stage:2, alive, 840 days
30.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
30.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
30.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
29.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
29.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
29.3
DO45245
0 years, female, NA, stage:2, dead, 240 days
29.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
29.0
DO45279
0 years, male, NA, stage:3, alive, 1290 days
29.0
DO45143
0 years, male, NA, stage:3, alive, 1290 days
28.7
DO23543
0 years, male, NA, stage:2, alive, 1020 days
28.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
28.6
DO45123
0 years, female, NA, stage:2, dead, 570 days
28.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
27.8
DO48716
0 years, male, NA, stage:2, alive, 720 days
27.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
27.2
DO45169
0 years, male, NA, stage:3, alive, 1350 days
26.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
26.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
26.8
DO45107
0 years, female, NA, stage:2, alive, 1710 days
26.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
26.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
26.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
25.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
25.8
DO48760
0 years, female, NA, stage:2, alive, 690 days
25.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
24.9
DO45181
0 years, female, NA, stage:2, alive, 1200 days
24.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
24.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
24.2
DO45161
0 years, male, NA, stage:2, dead, 540 days
24.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
23.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
23.6
DO45175
0 years, male, NA, stage:2, alive, 1140 days
23.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
23.2
DO48681
0 years, male, NA, stage:2, alive, 900 days
22.8
DO23549
0 years, male, NA, stage:3, alive, 990 days
22.8
DO50815
0 years, male, NA, stage:3, alive, 150 days
22.7
DO23531
0 years, female, NA, stage:3, alive, 900 days
22.4
DO48674
0 years, male, NA, stage:2, alive, 1260 days
22.1
DO50816
0 years, male, NA, stage:2, alive, 390 days
21.5
DO48761
0 years, male, NA, stage:2, alive, 870 days
21.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
21.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
21.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
21.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
19.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
19.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
17.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
16.4
DO45195
0 years, male, NA, stage:1, alive, 390 days
16.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
14.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
13.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
553
Tumor
2.0
131
Tumor
1.6
951
Tumor
1.5
635
Tumor
1.4
221
Tumor
1.2
523
Tumor
1.1
977
Tumor
1.1
425
Tumor
1.1
554
Normal
1.0
533
Tumor
1.0
473
Tumor
1.0
515
Tumor
1.0
411
Tumor
0.9
573
Tumor
0.9
663
Tumor
0.8
415
Tumor
0.8
743
Tumor
0.8
416
Normal
0.8
957
Tumor
0.8
537
Tumor
0.8
571
Tumor
0.8
527
Tumor
0.8
141
Tumor
0.8
217
Tumor
0.8
823
Tumor
0.8
745
Tumor
0.7
493
Tumor
0.7
671
Tumor
0.7
271
Tumor
0.7
135
Tumor
0.7
557
Tumor
0.7
277
Tumor
0.7
737
Tumor
0.7
1045
Tumor
0.7
364
Normal
0.7
545
Tumor
0.7
1032
Normal
0.6
123
Tumor
0.6
213
Tumor
0.6
563
Tumor
0.6
538
Normal
0.6
975
Tumor
0.6
647
Tumor
0.6
981
Tumor
0.6
387
Tumor
0.6
665
Tumor
0.6
356
Normal
0.6
395
Tumor
0.6
455
Tumor
0.6
261
Tumor
0.6
695
Tumor
0.6
343
Tumor
0.6
497
Tumor
0.6
191
Tumor
0.6
446
Normal
0.6
171
Tumor
0.6
367
Tumor
0.6
355
Tumor
0.6
715
Tumor
0.6
1041
Tumor
0.6
1013
Tumor
0.5
412
Normal
0.5
211
Tumor
0.5
223
Tumor
0.5
755
Tumor
0.5
283
Tumor
0.5
1022
Normal
0.5
1042
Normal
0.5
924
Normal
0.5
147
Tumor
0.5
257
Tumor
0.5
327
Tumor
0.5
741
Tumor
0.5
137
Tumor
0.5
328
Normal
0.5
617
Tumor
0.5
558
Normal
0.5
863
Tumor
0.5
478
Normal
0.5
785
Tumor
0.4
285
Tumor
0.4
1027
Tumor
0.4
817
Tumor
0.4
218
Normal
0.4
525
Tumor
0.4
483
Tumor
0.4
777
Tumor
0.4
685
Tumor
0.4
313
Tumor
0.4
963
Tumor
0.4
383
Tumor
0.4
231
Tumor
0.4
952
Normal
0.4
192
Normal
0.4
112
Tumor
0.4
332
Normal
0.4
937
Tumor
0.4
385
Tumor
0.4
357
Tumor
0.4
697
Tumor
0.4
568
Normal
0.3
421
Tumor
0.3
392
Normal
0.3
341
Tumor
0.3
746
Normal
0.3
431
Tumor
0.3
883
Tumor
0.3
267
Tumor
0.3
615
Tumor
0.3
672
Normal
0.3
648
Normal
0.3
447
Tumor
0.3
714
Normal
0.3
1021
Tumor
0.3
484
Normal
0.3
666
Normal
0.3
494
Normal
0.3
716
Normal
0.3
386
Normal
0.3
498
Normal
0.3
862
Normal
0.3
426
Normal
0.3
491
Tumor
0.3
481
Tumor
0.3
487
Tumor
0.3
344
Normal
0.3
513
Tumor
0.3
913
Tumor
0.3
524
Normal
0.3
351
Tumor
0.3
297
Tumor
0.3
884
Normal
0.2
911
Tumor
0.2
314
Normal
0.2
214
Normal
0.2
222
Normal
0.2
882
Normal
0.2
127
Tumor
0.2
195
Tumor
0.2
664
Normal
0.2
536
Normal
0.2
136
Normal
0.2
298
Normal
0.2
452
Normal
0.2
148
Normal
0.2
921
Tumor
0.2
488
Normal
0.2
938
Normal
0.2
227
Tumor
0.2
464
Normal
0.2
375
Tumor
0.2
185
Tumor
0.2
456
Normal
0.2
492
Normal
0.2
362
Normal
0.2
944
Normal
0.2
396
Normal
0.2
376
Normal
0.2
857
Tumor
0.2
618
Normal
0.2
742
Normal
0.2
642
Normal
0.2
196
Normal
0.2
535
Tumor
0.2
517
Tumor
0.2
867
Tumor
0.2
1028
Normal
0.2
187
Tumor
0.2
1026
Normal
0.2
636
Normal
0.2
393
Tumor
0.2
861
Tumor
0.2
813
Tumor
0.2
728
Normal
0.2
662
Normal
0.2
877
Tumor
0.2
914
Normal
0.1
436
Normal
0.1
722
Normal
0.1
698
Normal
0.1
572
Normal
0.1
955
Tumor
0.1
444
Normal
0.1
824
Normal
0.1
363
Tumor
0.1
471
Tumor
0.1
858
Normal
0.1
878
Normal
0.1
1044
Normal
0.1
628
Normal
0.1
388
Normal
0.1
462
Normal
0.1
881
Tumor
0.1
365
Tumor
0.1
394
Normal
0.1
641
Tumor
0.1
926
Normal
0.1
918
Normal
0.1
466
Normal
0.1
1031
Tumor
0.1
111
Normal
0.1
923
Tumor
0.1
983
Tumor
0.1
353
Tumor
0.1
474
Normal
0.1
278
Normal
0.1
696
Normal
0.1
124
Normal
0.1
428
Normal
0.1
627
Tumor
0.1
342
Normal
0.1
958
Normal
0.1
432
Normal
0.1
616
Normal
0.1
967
Tumor
0.1
916
Normal
0.1
186
Normal
0.1
391
Tumor
0.1
427
Tumor
0.0
965
Tumor
0.0
866
Normal
0.0
414
Normal
0.0
465
Tumor
0.0
468
Normal
0.0
564
Normal
0.0
1015
Tumor
0.0
368
Normal
0.0
567
Tumor
0.0
188
Normal
0.0
366
Normal
0.0
912
Normal
0.0
786
Normal
0.0
423
Tumor
0.0
915
Tumor
0.0
331
Tumor
0.0
433
Tumor
0.0
312
Normal
0.0
818
Normal
0.0
723
Tumor
0.0
744
Normal
0.0
311
Tumor
0.0
756
Normal
0.0
925
Tumor
0.0
146
Normal
0.0
518
Normal
0.0
358
Normal
0.0
477
Tumor
0.0
467
Tumor
0.0
954
Normal
0.0
873
Tumor
0.0
422
Normal
0.0
816
Normal
0.0
445
Tumor
0.0
361
Tumor
0.0
472
Normal
0.0
451
Tumor
-0.1
778
Normal
-0.1
228
Normal
-0.1
286
Normal
-0.1
138
Normal
-0.1
126
Normal
-0.1
352
Normal
-0.1
966
Normal
-0.1
172
Normal
-0.1
852
Normal
-0.1
1043
Tumor
-0.1
384
Normal
-0.1
865
Tumor
-0.1
721
Tumor
-0.1
686
Normal
-0.1
162
Normal
-0.1
1025
Tumor
-0.1
132
Normal
-0.1
284
Normal
-0.1
114
Normal
-0.1
1016
Normal
-0.1
413
Tumor
-0.1
864
Normal
-0.1
546
Normal
-0.1
161
Tumor
-0.1
482
Normal
-0.1
964
Normal
-0.1
424
Normal
-0.1
461
Tumor
-0.2
516
Normal
-0.2
514
Normal
-0.2
258
Normal
-0.2
212
Normal
-0.2
982
Normal
-0.2
435
Tumor
-0.2
113
Tumor
-0.2
574
Normal
-0.2
448
Normal
-0.2
354
Normal
-0.2
956
Normal
-0.2
145
Tumor
-0.2
526
Normal
-0.2
984
Normal
-0.2
738
Normal
-0.2
142
Normal
-0.2
434
Normal
-0.2
128
Normal
-0.2
874
Normal
-0.3
868
Normal
-0.3
661
Tumor
-0.3
1046
Normal
-0.3
922
Normal
-0.3
232
Normal
-0.3
978
Normal
-0.3
1014
Normal
-0.3
262
Normal
-0.3
968
Normal
-0.3
976
Normal
-0.3
814
Normal
-0.3
125
Tumor
-0.3
224
Normal
-0.3
534
Normal
-0.3
463
Tumor
-0.3
272
Normal
-0.4
953
Tumor
-0.4
443
Tumor
-0.4
713
Tumor
-0.4
917
Tumor
-0.4
528
Normal
-0.4
727
Tumor
-0.4
943
Tumor
-0.4
268
Normal
-0.4
851
Tumor
-0.5
724
Normal
-0.5
815
Tumor
-0.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
