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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
54.9
nTPM
HPA Brain:
0.8
nTPM
GTEx:
54.9
nTPM
FANTOM5:
55.1
Scaled Tags Per Million
Pig:
91.0
nTPM
Mouse:
120.3
nTPM
Allen mouse:
2.8
Expression energy
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
0.8
Sample id
Sample description
nTPM
Amygdala nTPM: 0.6
2514
Male, age 75, right hemisphere
0.7
2517
Female, age 94, left hemisphere
0.7
1987
Female, age 91, left hemisphere
0.6
2695
Female, age 67, right hemisphere
0.6
2814
Male, age 76, right hemisphere
0.6
Basal amygdala nTPM: 0.8
2827
Female, age 67, right hemisphere
1.6
2609
Male, age 75, right hemisphere
0.7
2685
Female, age 94, left hemisphere
0.7
1955
Male, age 76, both hemispheres
0.6
2110
Male, age 80, left hemisphere
0.6
2243
Female, age 91, right hemisphere
0.6
Central amygdala nTPM: 0.6
2515
Male, age 75, right hemisphere
0.7
2826
Female, age 94, left hemisphere
0.7
1905
Male, age 76, both hemispheres
0.6
2239
Male, age 80, left hemisphere
0.6
2701
Female, age 91, right hemisphere
0.6
Corticomedial amygdala nTPM: 0.6
2428
Male, age 75, right hemisphere
0.7
2429
Female, age 94, left hemisphere
0.7
2240
Male, age 76, both hemispheres
0.6
2242
Female, age 91, right hemisphere
0.6
2535
Female, age 67, right hemisphere
0.6
2829
Male, age 80, left hemisphere
0.6
Lateral amygdala nTPM: 0.7
1883
Male, age 76, both hemispheres
1.2
2516
Male, age 75, right hemisphere
0.7
2534
Female, age 94, left hemisphere
0.7
2255
Female, age 91, right hemisphere
0.6
2256
Male, age 80, left hemisphere
0.6
2830
Female, age 67, right hemisphere
0.6
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
54.9
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 54.9
Samples: 152
Max nTPM: 120.1
Min nTPM: 34.4
Std nTPM: 12.8
Median nTPM: 53.1
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
120.1
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
101.1
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
100.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
97.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
80.9
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
80.9
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
78.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
77.2
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
76.9
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
74.5
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
73.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
72.7
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
72.7
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
71.6
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
70.4
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
68.4
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
68.3
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
68.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
67.3
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
67.0
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
66.7
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
66.6
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
66.1
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
65.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
64.8
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
63.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
63.9
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
63.7
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
63.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
63.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
62.6
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
61.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
61.5
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
61.5
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
60.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
60.6
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
60.2
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
60.1
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
59.4
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
59.2
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
59.0
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
58.9
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
58.5
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
58.1
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
58.0
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
57.9
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
57.8
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
57.7
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
57.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
57.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
57.2
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
57.0
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
56.6
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
56.1
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
56.0
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
55.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
55.8
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
55.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
55.7
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
55.5
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
55.2
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
55.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
55.2
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
55.2
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
55.1
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
54.8
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
54.7
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
54.5
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
54.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
54.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
54.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
54.1
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
53.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
53.4
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
53.2
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
53.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
53.0
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
52.8
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
52.4
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
52.4
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
51.8
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
51.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
51.6
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
51.5
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
51.4
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
51.1
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
51.1
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
50.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
50.6
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
50.1
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
50.1
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
50.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
50.0
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
49.4
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
49.4
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
49.3
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
49.2
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
49.1
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
48.8
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
48.6
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
48.4
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
48.3
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
48.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
48.1
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
47.9
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
47.5
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
47.5
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
47.3
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
47.0
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
46.8
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
46.7
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
46.6
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
46.3
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
46.2
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
46.2
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
46.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
46.0
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
45.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
45.7
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
45.6
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
45.4
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
44.9
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
44.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
44.6
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
44.5
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
44.3
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
44.0
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
43.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
43.7
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
43.7
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
43.6
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
43.1
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
43.0
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
42.4
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
42.2
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
42.0
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
41.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
41.7
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
41.6
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
41.6
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
41.5
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
41.3
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
40.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
40.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
39.6
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
38.5
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
38.3
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
38.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
38.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
37.7
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
35.3
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
34.4
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
120.3
Mouse sample
Sample description
nTPM
Amygdala nTPM: 120.3
Samples: 4
Max nTPM: 129.4
Min nTPM: 109.1
Sample A
Male
119.1
Sample B
Male
129.4
Sample C
Female
123.7
Sample D
Female
109.1
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.