HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:10.0 nTPM
HPA Brain:0.2 nTPM
GTEx:10.0 nTPM
FANTOM5:28.8 Scaled Tags Per Million
Pig:19.5 nTPM
Mouse:24.7 nTPM
Allen mouse:3.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 0.2
Sample id Sample description nTPM
Hippocampus
nTPM: 0.1
2621 Female, age 67, right hemisphere 0.3
1898 Male, age 80, left hemisphere 0.1
1911 Female, age 85, right hemisphere 0.1
2148 Female, age 91, left hemisphere 0.1
2529 Female, age 94, left hemisphere 0.1
1855 Male, age 76, left hemisphere 0.0
Dentate gyrus
nTPM: 0.2
2531 Female, age 67, both hemispheres 0.5
2010 Male, age 76, both hemispheres 0.4
1927 Female, age 91, both hemispheres 0.1
2246 Female, age 85, both hemispheres 0.1
2528 Male, age 74, both hemispheres 0.1
2530 Female, age 94, left hemisphere 0.1
Entorhinal gyrus
nTPM: 0.2
1787 Male, age 76, left hemisphere 0.4
1938 Female, age 85, left hemisphere 0.2
2117 Female, age 91, right hemisphere 0.1
2613 Female, age 94, left hemisphere 0.1
2686 Male, age 75, right hemisphere 0.1
2764 Male, age 80, right hemisphere 0.1
Hippocampus, CA1
nTPM: 0.0
2082 Female, age 91, right hemisphere 0.1
2527 Male, age 74, both hemispheres 0.1
2749 Male, age 80, left hemisphere 0.1
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
Hippocampus, CA2
nTPM: 0.1
1892 Male, age 76, both hemispheres 0.3
1940 Female, age 85, left hemisphere 0.1
1963 Male, age 80, left hemisphere 0.1
2113 Female, age 91, right hemisphere 0.1
2249 Male, age 74, both hemispheres 0.1
2437 Female, age 94, left hemisphere 0.1
Hippocampus, CA3
nTPM: 0.1
1867 Male, age 76, both hemispheres 0.2
1891 Female, age 85, both hemispheres 0.1
2137 Male, age 80, left hemisphere 0.1
2436 Male, age 74, both hemispheres 0.1
2620 Female, age 94, left hemisphere 0.1
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 0.1
1933 Female, age 85, both hemispheres 0.2
1850 Male, age 80, both hemispheres 0.1
1990 Female, age 91, right hemisphere 0.1
2245 Female, age 91, both hemispheres 0.1
2250 Female, age 67, right hemisphere 0.1
2692 Male, age 74, both hemispheres 0.1
2693 Female, age 94, both hemispheres 0.1
2018 Male, age 76, both hemispheres 0.0
2532 Female, age 72, left hemisphere 0.0
2622 Female, age 67, right hemisphere 0.0
Perirhinal gyrus
nTPM: 0.2
1841 Female, age 85, right hemisphere 0.5
2848 Male, age 76, right hemisphere 0.3
1794 Male, age 80, right hemisphere 0.1
1847 Female, age 91, left hemisphere 0.1
2521 Female, age 94, right hemisphere 0.1
Subiculum
nTPM: 0.1
1977 Female, age 85, both hemispheres 0.2
1901 Male, age 80, both hemispheres 0.1
2438 Female, age 94, left hemisphere 0.1
2619 Male, age 74, both hemispheres 0.1
2729 Female, age 91, right hemisphere 0.1
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 10.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.0
Samples: 197

Max nTPM: 24.7
Min nTPM: 0.7
Std nTPM: 3.9
Median nTPM: 10.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 24.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 19.8
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 19.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 18.4
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 18.4
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 17.9
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 17.9
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 17.3
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 17.0
GTEX-12WSD-0011-R1b-SM-5LZVY 60-69 years, female 16.7
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 16.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 28.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.8
FF:10153-102I9 76 years, female 32.7
FF:10169-103B7 60 years, female 24.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 19.5
Pig sample Sample description nTPM
Subiculum
nTPM: 17.3
Samples: 4

Max nTPM: 21.9
Min nTPM: 14.9
Sample A Female 21.9
Sample B Female 14.9
Sample C Male 16.3
Sample D Male 16.0
Dorsal hippocampus
nTPM: 19.0
Samples: 4

Max nTPM: 23.0
Min nTPM: 14.9
Sample A Female 23.0
Sample B Female 20.5
Sample C Male 14.9
Sample D Male 17.7
Entorhinal cortex
nTPM: 16.2
Samples: 4

Max nTPM: 19.4
Min nTPM: 13.0
Sample A Female 19.4
Sample B Female 13.0
Sample C Male 16.0
Sample D Male 16.4
Ventral hippocampus
nTPM: 19.5
Samples: 4

Max nTPM: 23.6
Min nTPM: 13.4
Sample A Female 18.2
Sample B Female 13.4
Sample C Male 22.6
Sample D Male 23.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 24.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 23.8
Samples: 4

Max nTPM: 24.8
Min nTPM: 22.6
Sample A Male 22.8
Sample B Male 22.6
Sample C Female 24.8
Sample D Female 24.8
Hippocampal formation
nTPM: 24.7
Samples: 4

Max nTPM: 25.6
Min nTPM: 23.7
Sample A Male 25.6
Sample B Male 23.7
Sample C Female 25.2
Sample D Female 24.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 3.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 3.9
512753 Antisense, RP_040809_02_B11, Mouse strain C57BL/6J (56 days, male) 3.9

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