BASAL GANGLIA - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:0.9 nTPM
HPA Brain:0.5 nTPM
GTEx:0.9 nTPM

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max subtype nTPMi 0.5
Sample id Sample description nTPM
Caudate nucleus
nTPM: 0.3
2289 Male, age 61, right hemisphere 0.8
1857 Female, age 85, left hemisphere 0.6
2290 Female, age 72, unknown 0.4
1781 Male, age 74, unknown 0.3
1854 Male, age 80, left hemisphere 0.2
2288 Male, age 75, left hemisphere 0.1
2481 Female, age 94, left hemisphere 0.1
2846 Female, age 79, unknown 0.0
Globus pallidus, externus
nTPM: 0.0
2772 Female, age 79, unknown 0.3
1996 Male, age 80, right hemisphere 0.0
2395 Male, age 75, both hemispheres 0.0
2567 Female, age 72, unknown 0.0
2646 Male, age 61, right hemisphere 0.0
Globus pallidus, internus
nTPM: 0.0
1818 Male, age 74, unknown 0.1
2287 Male, age 75, right hemisphere 0.1
2483 Female, age 94, right hemisphere 0.1
2566 Female, age 72, unknown 0.1
2037 Male, age 80, right hemisphere 0.0
2111 Female, age 85, right hemisphere 0.0
2778 Female, age 91, both hemispheres 0.0
Nucleus accumbens
nTPM: 0.5
2824 Male, age 61, right hemisphere 1.5
1856 Female, age 91, right hemisphere 1.2
1783 Male, age 74, unknown 0.5
1806 Female, age 85, left hemisphere 0.3
2286 Male, age 75, left hemisphere 0.2
2698 Female, age 72, unknown 0.2
2391 Female, age 94, left hemisphere 0.1
2732 Male, age 80, right hemisphere 0.0
Nucleus basalis of Meynert
nTPM: 0.0
2393 Male, age 80, right hemisphere 0.0
2484 Female, age 94, left hemisphere 0.0
2569 Male, age 61, both hemispheres 0.0
2821 Male, age 75, both hemispheres 0.0
Nucleus of the diagonal band
nTPM: 0.0
1812 Female, age 91, both hemispheres 0.0
1979 Male, age 74, unknown 0.0
2029 Male, age 61, right hemisphere 0.0
2195 Female, age 85, both hemispheres 0.0
2775 Male, age 80, right hemisphere 0.0
Putamen
nTPM: 0.2
1937 Female, age 91, right hemisphere 0.6
1838 Male, age 80, right hemisphere 0.3
1829 Male, age 74, unknown 0.1
2482 Female, age 94, left hemisphere 0.1
2466 Female, age 79, unknown 0.0
2489 Female, age 72, unknown 0.0
2647 Male, age 75, left hemisphere 0.0
Septal nuclei
nTPM: 0.0
2629 Female, age 94, right hemisphere 0.2
2059 Female, age 85, both hemispheres 0.1
2394 Male, age 61, left hemisphere 0.1
1960 Male, age 74, unknown 0.0
2009 Female, age 91, both hemispheres 0.0
2031 Female, age 72, unknown 0.0
2199 Male, age 80, right hemisphere 0.0
Stria terminalis, bed nucleus
nTPM: 0.1
2201 Male, age 74, unknown 0.1
2486 Female, age 94, both hemispheres 0.1
1974 Female, age 91, both hemispheres 0.0

BASAL GANGLIA - GTEx RNA-seqi
Max subtype nTPMi 0.9
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 0.6
Samples: 246

Max nTPM: 3.8
Min nTPM: 0.0
Std nTPM: 0.5
Median nTPM: 0.5
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 3.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 3.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 2.9
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 2.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 2.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 2.4
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 2.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 2.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 2.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 1.9
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 1.9
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Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 0.9
Samples: 246

Max nTPM: 4.7
Min nTPM: 0.0
Std nTPM: 0.9
Median nTPM: 0.7
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 4.7
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 4.7
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 4.7
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 3.9
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 3.8
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 3.7
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 3.4
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 3.3
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 3.2
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 3.1
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 2.8
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Brain - Putamen (basal ganglia)
Average nTPM: 0.3
Samples: 205

Max nTPM: 3.5
Min nTPM: 0.0
Std nTPM: 0.4
Median nTPM: 0.2
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 3.5
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 2.1
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 2.0
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 2.0
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 1.9
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 1.5
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 1.3
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 1.2
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 1.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 1.1
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 1.1
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