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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
0.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
17.1
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
3.0
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
2.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
2.2
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
2.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
2.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
2.0
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
1.9
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
1.8
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
1.8
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
1.7
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
1.4
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
1.3
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
1.2
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
1.2
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
1.2
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
1.1
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
0.9
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
0.8
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
0.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
0.8
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
0.7
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
0.7
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
0.7
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
0.6
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
0.5
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
0.5
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
0.5
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
0.5
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
0.5
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
0.4
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
0.4
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
0.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
0.4
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
0.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
0.3
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
0.3
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
0.2
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
0.2
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
0.2
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
0.2
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
0.2
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
0.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
0.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
0.1
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
0.1
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
0.1
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
0.0
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
0.0
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
POU5F1 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.2
Number of samples
521
Samples
Sample
Description
TPM
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
168.3
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
106.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
104.0
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
101.4
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
95.8
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
92.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
91.9
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
86.6
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
83.3
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
83.2
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
78.5
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
78.3
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
76.4
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
76.0
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
73.3
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
73.2
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
71.1
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
70.3
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
69.7
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
69.7
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
66.7
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
65.4
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
64.0
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
63.8
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
60.6
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
58.4
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
58.1
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
58.0
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
57.6
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
57.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
57.5
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
57.0
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
56.0
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
53.7
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
52.8
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
52.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
49.4
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
48.2
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
48.0
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
47.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
47.2
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
47.0
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
46.9
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
46.8
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
46.2
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
45.4
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
45.3
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
44.9
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
44.2
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
42.9
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
42.3
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
41.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
41.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
40.7
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
40.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
40.1
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
39.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
39.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
38.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
38.2
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
38.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
37.6
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
37.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
37.4
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
37.1
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
36.9
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
36.8
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
36.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
36.1
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
35.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
35.5
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
35.2
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
35.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
35.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
35.0
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
34.7
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
34.4
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
34.2
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
34.2
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
34.1
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
34.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
33.8
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
33.6
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
33.4
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
33.3
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
33.3
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
32.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
32.7
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
32.5
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
31.9
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
31.5
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
31.2
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
31.1
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
30.9
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
30.7
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
30.4
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
30.3
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
30.0
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
29.3
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
29.2
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
29.0
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
28.8
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
28.5
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
28.2
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
28.0
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
27.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
27.9
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
27.6
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
27.6
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
27.4
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
27.1
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
26.7
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
26.3
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
26.3
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
26.3
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
26.0
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
26.0
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
26.0
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
25.9
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
25.7
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
25.7
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
25.5
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
25.4
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
25.3
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
25.3
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
25.2
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
25.0
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
25.0
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
24.9
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
24.9
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
24.7
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
24.7
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
24.7
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
24.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
24.2
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
24.2
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.2
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
24.0
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
24.0
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
23.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
23.8
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
23.8
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
23.7
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
23.6
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
23.6
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
23.5
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
23.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
23.4
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
23.3
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
23.1
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
23.0
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
22.9
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
22.7
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
22.6
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
22.5
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
22.5
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
22.4
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
22.2
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
22.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
22.1
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
21.9
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
21.8
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
21.8
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
21.6
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
21.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
21.0
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
20.9
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
20.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
20.8
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
20.7
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
20.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
20.4
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
20.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
20.4
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
20.3
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
20.3
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
20.3
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
20.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
20.0
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
19.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
19.8
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
19.7
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
19.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
19.4
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
19.4
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
19.2
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
19.1
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
19.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
19.1
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
19.0
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
19.0
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
18.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
18.8
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
18.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
18.5
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
18.5
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
18.5
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
18.4
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
18.3
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
18.2
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
18.2
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
17.9
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
17.9
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
17.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
17.5
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
17.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
17.4
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
17.2
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
17.0
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
16.9
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
16.8
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
16.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
16.7
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
16.6
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
16.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
16.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
16.3
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
16.1
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
15.9
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
15.9
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
15.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
15.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
15.7
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
15.7
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
15.6
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
15.5
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
15.5
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
15.4
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
15.4
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
15.3
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
15.2
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
15.2
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
15.2
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
15.2
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
15.2
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
15.2
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
15.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
15.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
14.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
14.8
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
14.7
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
14.5
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
14.4
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
14.3
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
14.2
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
14.1
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
14.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
14.0
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
13.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
13.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
13.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
13.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
13.3
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
13.3
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
13.2
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
13.2
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
13.1
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
13.0
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
13.0
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
13.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
12.9
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
12.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
12.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
12.8
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
12.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
12.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
12.7
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
12.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
12.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
12.5
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
12.4
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.3
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
12.3
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
12.2
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.0
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
11.9
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
11.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.9
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
11.8
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
11.8
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
11.8
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
11.7
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
11.6
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
11.5
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
11.5
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
11.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
11.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
11.3
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
11.3
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
11.3
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
11.2
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
11.1
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
11.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
11.1
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
10.9
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
10.8
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
10.8
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
10.8
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
10.8
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.7
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
10.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
10.5
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
10.5
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
10.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
10.4
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
10.4
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
10.4
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
10.4
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
10.3
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
10.3
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
10.3
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
10.3
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
10.3
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
10.3
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
10.2
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
10.1
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
10.0
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
10.0
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
10.0
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
10.0
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
9.9
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
9.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.7
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
9.7
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
9.7
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
9.6
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
9.3
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
9.2
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
9.1
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
9.1
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
9.1
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
9.1
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
9.1
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
9.0
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
8.9
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
8.9
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
8.8
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
8.7
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
8.7
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
8.7
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
8.6
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
8.4
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
8.4
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
8.3
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
8.3
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
8.3
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
8.3
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
8.2
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
8.2
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
8.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
8.1
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
8.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
8.1
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
8.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
8.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
8.0
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
7.9
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
7.7
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
7.6
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
7.6
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
7.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
7.5
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
7.5
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
7.4
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
7.3
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
7.3
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
7.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
7.0
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
7.0
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
6.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
6.8
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
6.8
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
6.8
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
6.7
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
6.7
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
6.6
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
6.5
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
6.4
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
6.4
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
6.3
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
6.3
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
6.3
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
6.3
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
6.1
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
6.1
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
6.1
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
6.1
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
6.1
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
6.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
6.0
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
6.0
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
5.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
5.9
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
5.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
5.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
5.8
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
5.7
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
5.7
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
5.5
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
5.5
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
5.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
5.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
5.4
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
5.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
5.3
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.3
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
5.3
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
5.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
5.2
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
5.2
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
5.2
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
5.2
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
5.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
5.1
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
5.0
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
5.0
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
4.9
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
4.9
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
4.9
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
4.9
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
4.8
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
4.8
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
4.8
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
4.7
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
4.7
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
4.7
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
4.7
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
4.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
4.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
4.6
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
4.6
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
4.5
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
4.5
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
4.4
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
4.4
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
4.3
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
4.3
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
4.2
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
4.2
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
4.2
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
4.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
4.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
4.0
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
4.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
3.7
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
3.7
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
3.6
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
3.6
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
3.5
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
3.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
3.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
3.4
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
3.4
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
3.4
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
3.3
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
3.3
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
3.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
3.3
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
3.3
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
3.3
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
3.3
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
3.3
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
3.3
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
3.2
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
3.2
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
3.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
3.2
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
3.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
3.2
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
3.2
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
3.1
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
3.1
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
3.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
3.0
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
2.9
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
2.9
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
2.9
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
2.9
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
2.9
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
2.9
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
2.9
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
2.8
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
2.8
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
2.7
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
2.7
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
2.7
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
2.6
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
2.6
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
2.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
2.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
2.4
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
2.3
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
2.2
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
2.2
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
2.2
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
2.2
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
2.2
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
2.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
2.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
1.8
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
1.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
1.7
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
1.6
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
1.5
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
1.5
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
1.5
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
1.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
1.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
1.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
1.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
0.9
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
0.9
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
0.8
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
0.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
0.6
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
0.5
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
0.4
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
0.4
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
POU5F1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.0
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
144.0
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
96.7
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
85.8
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
70.4
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
62.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
59.8
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
48.9
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
42.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
38.7
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
38.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
37.5
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
37.0
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
34.3
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
33.0
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
32.2
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
32.0
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
31.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
28.9
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
28.8
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
27.9
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
27.8
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
26.7
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
26.3
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
26.2
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
26.0
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
25.4
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
24.8
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
23.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
23.9
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
23.7
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
23.5
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
23.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
23.0
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
23.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.8
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
22.8
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
22.2
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
22.1
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
21.0
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
20.5
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
20.4
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
19.9
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
19.5
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
19.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
19.1
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
18.4
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
18.3
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
18.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
17.8
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
17.8
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
17.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
17.0
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
16.3
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
15.8
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
15.0
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
15.0
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
14.8
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
14.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
14.2
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
13.9
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
13.9
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
13.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
13.5
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
13.3
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
13.3
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
13.3
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
13.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
12.9
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
12.5
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
12.0
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
11.8
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
11.7
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
11.5
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
11.2
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
11.1
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
11.0
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
10.8
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
10.8
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
10.1
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
10.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
9.9
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
9.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
9.4
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
9.1
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
9.0
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
8.7
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
8.5
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
8.5
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
8.2
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
7.5
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
7.0
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
7.0
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
6.3
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
5.3
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
5.2
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
4.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
3.0
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
POU5F1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.1
Number of samples
282
Samples
Sample
Description
TPM
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
155.4
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
121.3
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
111.5
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
75.2
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
74.4
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
65.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
63.2
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
56.8
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
53.3
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
52.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
49.9
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
49.1
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
45.8
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
45.7
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
45.3
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
44.3
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
42.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
41.8
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
41.7
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
41.4
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
40.6
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
39.3
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
39.0
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
38.6
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
38.0
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
37.5
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
37.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
36.7
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
34.4
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
33.7
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
33.5
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
33.2
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
32.9
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
32.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
32.5
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
31.4
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
30.9
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
30.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
29.7
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
27.2
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
26.7
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
26.6
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
26.5
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
25.9
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
24.9
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
23.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
22.9
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
22.6
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
22.4
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
22.0
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
22.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
21.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
20.2
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
20.1
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
20.0
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
20.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
19.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
19.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
19.4
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
19.2
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
18.6
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
18.4
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
17.7
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
17.6
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
17.5
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
17.5
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
17.0
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
16.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
16.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
16.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
16.2
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
16.2
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
16.2
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
15.7
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
15.2
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
15.2
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
15.1
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
15.0
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
14.2
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
14.2
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
13.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
13.6
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
13.6
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
13.6
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
13.5
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
13.2
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
13.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
13.0
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
13.0
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
13.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
12.7
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
12.6
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
12.6
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
12.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
12.1
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
12.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
11.3
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
11.2
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
11.1
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
11.1
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
10.7
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
10.6
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
10.3
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
10.3
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
10.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
10.2
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
10.1
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
10.1
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
9.9
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
9.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
9.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
9.7
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
9.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.4
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
9.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
9.2
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
9.1
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
9.0
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
9.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
8.9
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
8.8
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
8.6
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
8.4
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
8.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
8.3
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
8.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
7.6
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
7.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
7.4
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
7.4
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
7.4
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
7.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.3
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
7.2
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
6.9
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
6.8
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
6.7
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
6.7
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
6.5
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
6.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
6.2
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
6.2
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
6.1
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
6.0
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
6.0
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
6.0
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
6.0
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
6.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
5.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
5.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
5.9
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
5.7
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
5.7
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
5.5
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
5.5
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
5.4
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
5.3
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
5.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
5.2
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
4.9
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
4.9
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
4.7
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
4.7
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
4.7
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
4.7
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
4.5
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
4.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
4.5
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
4.3
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
4.2
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
4.2
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
4.1
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
4.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
4.1
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
4.1
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
4.0
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
4.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
3.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
3.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
3.9
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
3.8
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
3.8
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
3.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
3.8
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
3.8
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
3.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
3.5
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
3.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
3.4
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
3.4
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
3.3
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
3.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
3.2
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
3.1
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
3.1
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
3.1
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
3.0
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
3.0
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
3.0
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
2.7
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
2.6
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
2.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
2.6
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
2.6
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
2.6
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
2.6
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
2.6
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
2.5
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
2.5
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
2.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
2.4
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
2.4
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
2.4
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
2.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
2.3
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
2.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
2.2
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
2.2
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
2.2
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
2.2
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
2.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
2.0
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
1.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
1.9
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
1.8
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
1.7
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
1.7
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
1.6
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
1.6
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
1.6
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
1.6
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
1.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
1.6
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
1.5
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
1.5
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
1.5
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
1.5
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
1.5
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
1.4
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
1.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
1.3
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
1.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
1.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
1.2
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
1.2
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
0.9
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
0.9
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
0.8
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
0.8
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
0.8
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
0.8
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
0.8
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
0.8
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
0.7
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
0.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
0.6
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
0.5
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
0.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
0.4
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
0.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
0.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
0.2
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
0.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
0.1
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
0.1
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
0.1
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
0.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
0.0
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
0.0
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
0.0
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
