HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
RNA expressioni
Consensus:112.0 nTPM
HPA Brain:9.8 nTPM
GTEx:112.0 nTPM
FANTOM5:35.5 Scaled Tags Per Million
Pig:53.9 nTPM
Mouse:107.6 nTPM
Allen mouse:2.9 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA043032Antibody HPA048123
Glial cells Not detectedNot detected
Neuronal cells MediumMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 9.8
Sample id Sample description nTPM
Hippocampus
nTPM: 9.3
2621 Female, age 67, right hemisphere 12.1
1898 Male, age 80, left hemisphere 10.6
1855 Male, age 76, left hemisphere 9.3
2529 Female, age 94, left hemisphere 8.5
2148 Female, age 91, left hemisphere 8.0
1911 Female, age 85, right hemisphere 7.1
Dentate gyrus
nTPM: 8.1
2530 Female, age 94, left hemisphere 10.9
2010 Male, age 76, both hemispheres 8.2
1927 Female, age 91, both hemispheres 8.1
2531 Female, age 67, both hemispheres 7.6
2246 Female, age 85, both hemispheres 7.4
2528 Male, age 74, both hemispheres 6.6
Entorhinal gyrus
nTPM: 8.4
1787 Male, age 76, left hemisphere 9.1
1938 Female, age 85, left hemisphere 8.8
2764 Male, age 80, right hemisphere 8.6
2613 Female, age 94, left hemisphere 8.4
2686 Male, age 75, right hemisphere 8.2
2117 Female, age 91, right hemisphere 7.2
Hippocampus, CA1
nTPM: 8.8
1873 Female, age 85, both hemispheres 10.4
2749 Male, age 80, left hemisphere 10.1
2045 Male, age 76, both hemispheres 9.9
2527 Male, age 74, both hemispheres 7.1
2082 Female, age 91, right hemisphere 6.7
Hippocampus, CA2
nTPM: 8.7
1892 Male, age 76, both hemispheres 11.8
2249 Male, age 74, both hemispheres 10.0
1940 Female, age 85, left hemisphere 8.1
1963 Male, age 80, left hemisphere 7.9
2437 Female, age 94, left hemisphere 7.9
2113 Female, age 91, right hemisphere 6.7
Hippocampus, CA3
nTPM: 8.0
2137 Male, age 80, left hemisphere 9.3
2620 Female, age 94, left hemisphere 9.0
2436 Male, age 74, both hemispheres 7.7
1891 Female, age 85, both hemispheres 7.6
1867 Male, age 76, both hemispheres 7.5
2861 Female, age 67, both hemispheres 6.8
Parahippocampal cortex
nTPM: 8.9
1933 Female, age 85, both hemispheres 11.0
1850 Male, age 80, both hemispheres 10.4
2018 Male, age 76, both hemispheres 9.3
2245 Female, age 91, both hemispheres 9.3
2250 Female, age 67, right hemisphere 9.3
2532 Female, age 72, left hemisphere 9.1
1990 Female, age 91, right hemisphere 8.5
2693 Female, age 94, both hemispheres 7.8
2622 Female, age 67, right hemisphere 7.5
2692 Male, age 74, both hemispheres 7.1
Perirhinal gyrus
nTPM: 9.8
1841 Female, age 85, right hemisphere 11.3
1847 Female, age 91, left hemisphere 10.9
1794 Male, age 80, right hemisphere 10.1
2848 Male, age 76, right hemisphere 8.7
2521 Female, age 94, right hemisphere 7.9
Subiculum
nTPM: 8.3
1977 Female, age 85, both hemispheres 9.8
2042 Male, age 76, both hemispheres 9.0
2619 Male, age 74, both hemispheres 9.0
1901 Male, age 80, both hemispheres 8.8
2438 Female, age 94, left hemisphere 7.8
2729 Female, age 91, right hemisphere 5.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 112.0
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 112.0
Samples: 197

Max nTPM: 253.3
Min nTPM: 46.5
Std nTPM: 36.0
Median nTPM: 106.6
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 253.3
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 220.1
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 203.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 199.9
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 195.8
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 188.6
GTEX-YJ89-0011-R1a-SM-4RGLS 60-69 years, male 187.1
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 182.7
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 180.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 179.0
GTEX-1F6I4-0011-R1a-SM-9OSWU 60-69 years, male 178.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 35.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 35.5
FF:10169-103B7 60 years, female 50.8
FF:10153-102I9 76 years, female 20.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 53.9
Pig sample Sample description nTPM
Subiculum
nTPM: 51.4
Samples: 4

Max nTPM: 64.3
Min nTPM: 46.8
Sample A Female 64.3
Sample B Female 47.2
Sample C Male 46.8
Sample D Male 47.2
Dorsal hippocampus
nTPM: 53.9
Samples: 4

Max nTPM: 69.3
Min nTPM: 42.2
Sample A Female 69.3
Sample B Female 46.1
Sample C Male 57.8
Sample D Male 42.2
Entorhinal cortex
nTPM: 48.9
Samples: 4

Max nTPM: 57.4
Min nTPM: 42.3
Sample A Female 48.0
Sample B Female 57.4
Sample C Male 47.7
Sample D Male 42.3
Ventral hippocampus
nTPM: 52.2
Samples: 4

Max nTPM: 59.0
Min nTPM: 40.9
Sample A Female 52.1
Sample B Female 40.9
Sample C Male 56.8
Sample D Male 59.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 107.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 107.6
Samples: 4

Max nTPM: 116.1
Min nTPM: 103.4
Sample A Male 104.3
Sample B Male 116.1
Sample C Female 103.4
Sample D Female 106.5
Hippocampal formation
nTPM: 104.8
Samples: 4

Max nTPM: 117.2
Min nTPM: 96.0
Sample A Male 117.2
Sample B Male 98.8
Sample C Female 96.0
Sample D Female 107.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.9
68196924 Antisense, RP_041116_01_E12, Mouse strain C57BL/6J (56 days, male) 2.9

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