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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C2orf72 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
3.2
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
16.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
13.7
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
12.4
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
12.2
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
12.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
11.2
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
10.9
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
10.2
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
10.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.0
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
9.8
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
9.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
9.7
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
9.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
9.5
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
9.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
8.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
8.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
8.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
8.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
8.6
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
8.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
8.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
8.1
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
8.1
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
8.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
7.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
7.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
7.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
7.2
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
7.1
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
7.0
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
7.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
6.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
6.7
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
6.7
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
6.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
6.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
6.4
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
6.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.2
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
6.2
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
6.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
6.0
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
6.0
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
5.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
5.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
5.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
5.8
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
5.7
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
5.5
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
5.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
5.5
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
5.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
5.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.3
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5.3
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
5.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
5.2
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
5.2
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
5.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
5.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
5.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
5.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
5.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
5.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
4.9
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
4.9
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
4.9
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.9
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
4.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
4.8
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
4.8
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
4.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
4.7
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
4.7
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
4.7
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
4.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
4.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
4.6
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
4.6
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
4.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.6
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
4.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
4.5
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
4.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
4.5
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
4.4
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
4.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
4.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
4.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
4.3
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
4.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
4.2
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
4.2
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
4.1
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
4.1
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
4.1
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
4.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
4.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
4.0
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
4.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
4.0
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
3.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
3.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
3.9
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
3.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
3.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
3.8
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.8
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
3.8
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
3.8
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
3.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
3.7
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
3.7
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
3.6
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
3.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
3.6
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
3.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
3.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
3.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
3.4
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
3.4
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
3.4
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
3.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
3.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
3.3
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
3.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
3.3
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
3.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
3.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
3.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
3.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
3.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
3.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
3.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
3.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
3.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
3.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
3.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
3.1
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
3.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
3.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3.0
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
3.0
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
3.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
3.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.0
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
3.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
3.0
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
3.0
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
3.0
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
2.9
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
2.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
2.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
2.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
2.8
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
2.8
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
2.8
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.8
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
2.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
2.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
2.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
2.7
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
2.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
2.7
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
2.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2.7
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
2.7
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
2.7
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
2.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
2.6
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
2.6
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
2.6
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
2.6
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
2.6
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
2.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
2.6
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
2.5
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
2.5
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
2.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
2.5
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
2.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
2.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
2.5
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
2.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
2.4
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
2.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
2.4
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
2.4
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
2.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
2.4
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
2.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
2.3
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
2.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
2.3
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
2.3
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
2.3
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
2.3
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
2.3
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
2.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
2.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
2.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
2.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
2.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
2.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
2.1
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
2.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
2.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
2.1
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
2.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
2.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
2.0
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
2.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
2.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
2.0
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
2.0
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
2.0
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
2.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
1.9
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
1.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
1.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
1.9
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
1.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
1.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
1.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
1.9
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
1.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
1.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
1.8
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
1.8
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
1.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
1.7
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
1.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
1.7
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
1.7
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
1.7
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
1.7
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
1.7
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
1.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
1.7
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
1.7
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
1.6
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
1.6
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
1.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
1.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
1.6
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1.5
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
1.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
1.5
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
1.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
1.5
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
1.5
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
1.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
1.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
1.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
1.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
1.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
1.4
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
1.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
1.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1.3
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
1.3
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1.3
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
1.3
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
1.3
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
1.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
1.2
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
1.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
1.1
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
1.1
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
1.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
1.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
1.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1.1
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
1.1
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
1.0
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
1.0
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
1.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
1.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
1.0
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1.0
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
1.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
1.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
1.0
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
0.9
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
0.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
0.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
0.9
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
0.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
0.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
0.8
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
0.8
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
0.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
0.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
0.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
0.7
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.7
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.7
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
0.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
0.6
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
0.6
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
0.6
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
0.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
0.6
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
0.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.5
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
0.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
0.5
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
0.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.5
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
0.4
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
0.4
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
0.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
0.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
0.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
0.3
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
0.3
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.2
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
0.2
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
0.2
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
0.1
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
0.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
0.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
0.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
0.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
0.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
C2orf72 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
53.4
Number of samples
231
Samples
Sample
Description
TPM
DO50820
0 years, female, NA, stage:3, alive, 510 days
257.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
223.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
205.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
171.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
163.4
DO45189
0 years, female, NA, stage:2, alive, 1200 days
132.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
128.0
DO48715
0 years, female, NA, stage:2, dead, 690 days
125.1
DO50793
0 years, male, NA, stage:4, alive, 540 days
119.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
117.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
117.6
DO45096
0 years, male, NA, stage:2, dead, 1290 days
116.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
116.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
116.3
DO23511
0 years, female, NA, stage:3, dead, 180 days
115.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
108.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
106.2
DO23528
0 years, female, NA, stage:2, alive, 1020 days
105.8
DO45289
0 years, female, NA, stage:3, alive, 360 days
104.1
DO50844
0 years, male, NA, stage:4, alive, 300 days
101.0
DO45183
0 years, female, NA, stage:2, dead, 570 days
98.5
DO50811
0 years, male, NA, stage:1, alive, 450 days
96.0
DO23545
0 years, male, NA, stage:2, dead, 570 days
94.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
92.8
DO45265
0 years, male, NA, stage:3, alive, 1020 days
92.7
DO50818
0 years, male, NA, stage:2, alive, 510 days
91.4
DO45121
0 years, male, NA, stage:3, alive, 1530 days
90.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
90.4
DO45113
0 years, male, NA, stage:3, alive, 1560 days
90.4
DO48736
0 years, female, NA, stage:1, alive, 600 days
90.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
88.9
DO50802
0 years, male, NA, stage:2, alive, 930 days
88.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
85.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
85.8
DO23510
0 years, female, NA, stage:2, alive, 870 days
85.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
83.8
DO45201
0 years, male, NA, stage:1, alive, 900 days
83.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
82.5
DO50785
0 years, male, NA, stage:4, dead, 90 days
82.1
DO45131
0 years, male, NA, stage:4, dead, 360 days
80.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
79.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
78.9
DO45094
0 years, male, NA, stage:3, alive, 1650 days
78.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
78.4
DO45267
0 years, male, NA, stage:3, dead, 570 days
78.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
78.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
76.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
75.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
73.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
73.4
DO48743
0 years, female, NA, stage:2, alive, 570 days
72.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
72.6
DO50789
0 years, female, NA, stage:2, alive, 570 days
70.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
70.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
69.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
69.0
DO48712
0 years, male, NA, stage:2, alive, 810 days
68.9
DO48725
0 years, male, NA, stage:1, alive, 780 days
67.2
DO45105
0 years, male, NA, stage:1, alive, 1680 days
67.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
66.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
66.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
66.8
DO45165
0 years, male, NA, stage:2, alive, 690 days
66.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
66.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
65.2
DO50859
0 years, male, NA, stage:2, alive, 180 days
65.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
65.0
DO23529
0 years, male, NA, stage:4, alive, 930 days
64.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
64.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
64.5
DO45173
0 years, male, NA, stage:3, alive, 1170 days
64.4
DO48727
0 years, female, NA, stage:2, dead, 390 days
64.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
63.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
62.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
62.2
DO45229
0 years, male, NA, stage:1, alive, 990 days
61.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
60.3
DO45281
0 years, male, NA, stage:4, alive, 750 days
60.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
58.8
DO48746
0 years, male, NA, stage:3, alive, 570 days
58.7
DO45103
0 years, male, NA, stage:3, alive, 450 days
58.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
58.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
58.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
57.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
57.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
57.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
57.4
DO45199
0 years, female, NA, stage:2, alive, 1350 days
57.4
DO50855
0 years, male, NA, stage:2, alive, 570 days
57.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
56.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
55.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
55.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
54.2
DO48682
0 years, female, NA, stage:3, dead, 120 days
53.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
53.8
DO45125
0 years, male, NA, stage:3, alive, 1680 days
53.6
DO50783
0 years, male, NA, stage:3, alive, 480 days
52.4
DO45213
0 years, male, NA, stage:1, alive, 1200 days
51.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
50.8
DO50825
0 years, male, NA, stage:2, alive, 390 days
50.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
50.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
49.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
49.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
48.7
DO48728
0 years, female, NA, stage:2, alive, 150 days
48.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
48.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
47.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
47.5
DO45253
0 years, male, NA, stage:2, alive, 870 days
47.1
DO45177
0 years, female, NA, stage:3, alive, 1260 days
46.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
46.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
46.3
DO45269
0 years, male, NA, stage:3, alive, 750 days
46.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
46.2
DO23550
0 years, male, NA, stage:1, alive, 990 days
46.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
45.7
DO50813
0 years, male, NA, stage:2, alive, 420 days
45.7
DO45181
0 years, female, NA, stage:2, alive, 1200 days
45.1
DO45203
0 years, female, NA, stage:2, alive, 1170 days
44.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
44.8
DO45129
0 years, male, NA, stage:3, alive, 1470 days
44.6
DO45225
0 years, male, NA, stage:1, alive, 1050 days
43.8
DO50840
0 years, male, NA, stage:2, alive, 330 days
43.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
43.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
42.6
DO45097
0 years, male, NA, stage:3, alive, 1620 days
42.4
DO45159
0 years, male, NA, stage:3, alive, 1470 days
42.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
42.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
41.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
41.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
41.6
DO45091
0 years, male, NA, stage:2, dead, 1320 days
41.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
41.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
41.1
DO48737
0 years, male, NA, stage:1, alive, 720 days
41.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
41.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
40.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
40.3
DO48719
0 years, male, NA, stage:2, alive, 690 days
39.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
39.5
DO45283
0 years, male, NA, stage:3, alive, 510 days
37.7
DO23517
0 years, male, NA, stage:2, alive, 1200 days
37.5
DO50850
0 years, male, NA, stage:3, alive, 720 days
37.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
36.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
36.5
DO50857
0 years, male, NA, stage:2, alive, 210 days
36.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
36.2
DO23509
0 years, male, NA, stage:3, dead, 780 days
36.2
DO45167
0 years, male, NA, stage:2, dead, 1440 days
36.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
35.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
35.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
35.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
34.8
DO45263
0 years, male, NA, stage:3, dead, 270 days
34.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
34.4
DO45093
0 years, male, NA, stage:2, dead, 720 days
34.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
34.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
34.0
DO48733
0 years, male, NA, stage:2, alive, 600 days
33.9
DO45101
0 years, male, NA, stage:2, alive, 1680 days
33.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
33.7
DO48704
0 years, female, NA, stage:3, alive, 750 days
33.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
33.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
33.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
33.2
DO45241
0 years, male, NA, stage:1, alive, 1080 days
33.0
DO48693
0 years, male, NA, stage:2, alive, 900 days
33.0
DO45092
0 years, male, NA, stage:4, dead, 1200 days
32.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
32.3
DO23518
0 years, male, NA, stage:2, alive, 1320 days
32.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
32.1
DO45109
0 years, male, NA, stage:2, alive, 1590 days
31.8
DO45171
0 years, male, NA, stage:3, alive, 600 days
31.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
31.6
DO23542
0 years, male, NA, stage:3, alive, 960 days
31.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
30.7
DO23548
0 years, female, NA, stage:1, alive, 840 days
30.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
29.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
29.8
DO45127
0 years, male, NA, stage:3, dead, 420 days
29.8
DO50798
0 years, male, NA, stage:3, dead, 30 days
28.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
28.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
28.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
28.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
27.5
DO45255
0 years, male, NA, stage:3, alive, 720 days
27.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
27.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
26.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
26.4
DO48695
0 years, male, NA, stage:2, alive, 720 days
23.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
23.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
23.2
DO23524
0 years, female, NA, stage:2, alive, 1050 days
22.4
DO45303
0 years, female, NA, stage:3, alive, 990 days
21.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
21.6
DO50832
0 years, male, NA, stage:3, alive, 90 days
21.1
DO50805
0 years, male, NA, stage:2, alive, 690 days
20.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
20.2
DO45277
0 years, male, NA, stage:3, alive, 600 days
20.2
DO45251
0 years, female, NA, stage:2, alive, 900 days
19.4
DO23544
0 years, male, NA, stage:2, alive, 960 days
19.2
DO23549
0 years, male, NA, stage:3, alive, 990 days
18.7
DO45133
0 years, male, NA, stage:3, dead, 660 days
18.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
18.0
DO48759
0 years, male, NA, stage:3, alive, 720 days
17.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
17.4
DO45261
0 years, male, NA, stage:3, alive, 990 days
17.2
DO50808
0 years, male, NA, stage:2, alive, 570 days
16.9
DO50774
0 years, female, NA, stage:2, alive, 720 days
16.4
DO23514
0 years, male, NA, stage:2, alive, 1290 days
15.9
DO45299
0 years, female, NA, stage:1, alive, 1440 days
15.8
DO45297
0 years, female, NA, stage:4, dead, 1260 days
15.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
15.2
DO50819
0 years, female, NA, stage:2, alive, 510 days
12.9
DO45305
0 years, male, NA, stage:4, alive, 300 days
12.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
11.4
DO45301
0 years, male, NA, stage:2, dead, 1440 days
11.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
11.0
DO45237
0 years, male, NA, stage:2, alive, 900 days
10.6
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
10.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.6
DO23547
0 years, male, NA, stage:1, alive, 1020 days
9.0
DO48747
0 years, male, NA, stage:3, alive, 540 days
7.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.9
DO23530
0 years, male, NA, stage:4, dead, 180 days
4.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
3.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
2.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
0.7
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.1
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
967
Tumor
1.0
358
Normal
0.8
737
Tumor
0.8
571
Tumor
0.7
517
Tumor
0.7
227
Tumor
0.7
128
Normal
0.6
267
Tumor
0.6
618
Normal
0.6
963
Tumor
0.6
396
Normal
0.6
464
Normal
0.6
286
Normal
0.6
414
Normal
0.6
278
Normal
0.6
743
Tumor
0.6
436
Normal
0.6
111
Normal
0.6
277
Tumor
0.5
171
Tumor
0.5
484
Normal
0.5
462
Normal
0.5
452
Normal
0.5
392
Normal
0.5
342
Normal
0.5
617
Tumor
0.5
428
Normal
0.5
568
Normal
0.5
426
Normal
0.5
635
Tumor
0.5
218
Normal
0.5
742
Normal
0.5
388
Normal
0.5
977
Tumor
0.4
1045
Tumor
0.4
952
Normal
0.4
922
Normal
0.4
435
Tumor
0.4
272
Normal
0.4
738
Normal
0.4
574
Normal
0.4
482
Normal
0.4
727
Tumor
0.4
912
Normal
0.4
528
Normal
0.4
477
Tumor
0.4
422
Normal
0.4
642
Normal
0.4
884
Normal
0.4
456
Normal
0.4
376
Normal
0.4
448
Normal
0.4
368
Normal
0.4
926
Normal
0.4
298
Normal
0.4
136
Normal
0.4
341
Tumor
0.4
393
Tumor
0.4
271
Tumor
0.4
424
Normal
0.4
1025
Tumor
0.4
463
Tumor
0.4
468
Normal
0.4
554
Normal
0.4
745
Tumor
0.4
328
Normal
0.4
147
Tumor
0.4
723
Tumor
0.4
518
Normal
0.4
786
Normal
0.4
534
Normal
0.4
514
Normal
0.3
312
Normal
0.3
114
Normal
0.3
964
Normal
0.3
858
Normal
0.3
493
Tumor
0.3
628
Normal
0.3
186
Normal
0.3
314
Normal
0.3
481
Tumor
0.3
466
Normal
0.3
445
Tumor
0.3
232
Normal
0.3
113
Tumor
0.3
416
Normal
0.3
132
Normal
0.3
214
Normal
0.3
648
Normal
0.3
353
Tumor
0.3
391
Tumor
0.3
196
Normal
0.3
362
Normal
0.3
465
Tumor
0.3
258
Normal
0.3
982
Normal
0.3
944
Normal
0.3
423
Tumor
0.3
778
Normal
0.3
228
Normal
0.3
728
Normal
0.3
662
Normal
0.3
878
Normal
0.3
365
Tumor
0.3
924
Normal
0.3
1016
Normal
0.3
1026
Normal
0.3
744
Normal
0.3
332
Normal
0.3
472
Normal
0.3
494
Normal
0.3
412
Normal
0.3
413
Tumor
0.3
1044
Normal
0.3
344
Normal
0.3
698
Normal
0.3
955
Tumor
0.3
357
Tumor
0.3
756
Normal
0.3
162
Normal
0.3
474
Normal
0.3
394
Normal
0.3
432
Normal
0.3
1014
Normal
0.3
222
Normal
0.2
664
Normal
0.2
354
Normal
0.2
824
Normal
0.2
636
Normal
0.2
1042
Normal
0.2
262
Normal
0.2
363
Tumor
0.2
268
Normal
0.2
696
Normal
0.2
148
Normal
0.2
356
Normal
0.2
366
Normal
0.2
862
Normal
0.2
874
Normal
0.2
488
Normal
0.2
124
Normal
0.2
965
Tumor
0.2
918
Normal
0.2
212
Normal
0.2
172
Normal
0.2
1028
Normal
0.2
553
Tumor
0.2
285
Tumor
0.2
695
Tumor
0.2
755
Tumor
0.2
195
Tumor
0.2
914
Normal
0.2
446
Normal
0.2
451
Tumor
0.2
956
Normal
0.2
641
Tumor
0.2
352
Normal
0.2
968
Normal
0.2
127
Tumor
0.2
188
Normal
0.2
616
Normal
0.2
866
Normal
0.2
816
Normal
0.2
497
Tumor
0.2
526
Normal
0.2
425
Tumor
0.2
386
Normal
0.2
364
Normal
0.1
868
Normal
0.1
131
Tumor
0.1
686
Normal
0.1
1031
Tumor
0.1
1046
Normal
0.1
715
Tumor
0.1
981
Tumor
0.1
818
Normal
0.1
966
Normal
0.1
867
Tumor
0.1
415
Tumor
0.1
938
Normal
0.1
434
Normal
0.1
433
Tumor
0.1
863
Tumor
0.1
546
Normal
0.1
138
Normal
0.1
564
Normal
0.1
187
Tumor
0.1
1022
Normal
0.1
713
Tumor
0.1
387
Tumor
0.1
498
Normal
0.1
851
Tumor
0.1
911
Tumor
0.1
627
Tumor
0.1
666
Normal
0.1
746
Normal
0.1
217
Tumor
0.1
697
Tumor
0.1
714
Normal
0.1
722
Normal
0.1
864
Normal
0.1
1013
Tumor
0.1
1032
Normal
0.1
284
Normal
0.1
951
Tumor
0.1
533
Tumor
0.1
231
Tumor
0.0
126
Normal
0.0
882
Normal
0.0
313
Tumor
0.0
558
Normal
0.0
958
Normal
0.0
857
Tumor
0.0
142
Normal
0.0
361
Tumor
0.0
523
Tumor
0.0
443
Tumor
0.0
145
Tumor
0.0
527
Tumor
0.0
923
Tumor
0.0
567
Tumor
0.0
741
Tumor
0.0
721
Tumor
0.0
915
Tumor
0.0
572
Normal
0.0
327
Tumor
0.0
471
Tumor
0.0
191
Tumor
0.0
716
Normal
0.0
146
Normal
0.0
492
Normal
0.0
785
Tumor
0.0
672
Normal
0.0
1043
Tumor
0.0
921
Tumor
-0.1
978
Normal
-0.1
984
Normal
-0.1
1041
Tumor
-0.1
421
Tumor
-0.1
221
Tumor
-0.1
224
Normal
-0.1
976
Normal
-0.1
444
Normal
-0.1
461
Tumor
-0.1
516
Normal
-0.1
112
Tumor
-0.1
724
Normal
-0.1
411
Tumor
-0.1
1027
Tumor
-0.1
261
Tumor
-0.1
852
Normal
-0.1
427
Tumor
-0.1
954
Normal
-0.1
913
Tumor
-0.2
814
Normal
-0.2
297
Tumor
-0.2
141
Tumor
-0.2
123
Tumor
-0.2
557
Tumor
-0.2
983
Tumor
-0.2
813
Tumor
-0.2
367
Tumor
-0.2
137
Tumor
-0.2
916
Normal
-0.2
873
Tumor
-0.2
937
Tumor
-0.2
975
Tumor
-0.2
671
Tumor
-0.2
515
Tumor
-0.2
817
Tumor
-0.2
861
Tumor
-0.3
777
Tumor
-0.3
536
Normal
-0.3
647
Tumor
-0.3
213
Tumor
-0.3
538
Normal
-0.3
223
Tumor
-0.3
478
Normal
-0.3
135
Tumor
-0.3
431
Tumor
-0.3
192
Normal
-0.3
343
Tumor
-0.3
185
Tumor
-0.3
957
Tumor
-0.3
663
Tumor
-0.3
384
Normal
-0.3
524
Normal
-0.3
487
Tumor
-0.3
877
Tumor
-0.4
447
Tumor
-0.4
1021
Tumor
-0.4
615
Tumor
-0.4
685
Tumor
-0.4
881
Tumor
-0.4
161
Tumor
-0.4
331
Tumor
-0.4
953
Tumor
-0.5
257
Tumor
-0.5
917
Tumor
-0.5
823
Tumor
-0.5
483
Tumor
-0.5
925
Tumor
-0.5
355
Tumor
-0.5
865
Tumor
-0.5
395
Tumor
-0.5
473
Tumor
-0.5
513
Tumor
-0.5
563
Tumor
-0.5
665
Tumor
-0.5
467
Tumor
-0.5
455
Tumor
-0.5
545
Tumor
-0.5
883
Tumor
-0.6
815
Tumor
-0.6
943
Tumor
-0.6
573
Tumor
-0.6
1015
Tumor
-0.6
537
Tumor
-0.7
383
Tumor
-0.7
385
Tumor
-0.7
525
Tumor
-0.7
375
Tumor
-0.8
491
Tumor
-0.8
535
Tumor
-0.8
661
Tumor
-0.9
125
Tumor
-1.0
283
Tumor
-1.0
311
Tumor
-1.0
351
Tumor
-1.2
211
Tumor
-1.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.