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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
53.3
nTPM
HPA Brain:
39.5
nTPM
GTEx:
53.3
nTPM
FANTOM5:
15.7
Scaled Tags Per Million
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
39.5
Sample id
Sample description
nTPM
Amygdala nTPM: 31.5
1987
Female, age 91, left hemisphere
34.1
2514
Male, age 75, right hemisphere
34.1
2517
Female, age 94, left hemisphere
32.1
2814
Male, age 76, right hemisphere
31.8
2695
Female, age 67, right hemisphere
25.2
Basal amygdala nTPM: 34.8
2243
Female, age 91, right hemisphere
50.2
2685
Female, age 94, left hemisphere
37.8
2110
Male, age 80, left hemisphere
35.4
1955
Male, age 76, both hemispheres
32.7
2609
Male, age 75, right hemisphere
28.4
2827
Female, age 67, right hemisphere
24.2
Central amygdala nTPM: 35.9
2701
Female, age 91, right hemisphere
45.2
2239
Male, age 80, left hemisphere
43.7
2515
Male, age 75, right hemisphere
33.9
1905
Male, age 76, both hemispheres
30.1
2826
Female, age 94, left hemisphere
26.3
Corticomedial amygdala nTPM: 39.5
2242
Female, age 91, right hemisphere
48.4
2535
Female, age 67, right hemisphere
47.4
2240
Male, age 76, both hemispheres
40.5
2829
Male, age 80, left hemisphere
39.0
2429
Female, age 94, left hemisphere
37.2
2428
Male, age 75, right hemisphere
24.6
Lateral amygdala nTPM: 28.1
2255
Female, age 91, right hemisphere
36.5
2534
Female, age 94, left hemisphere
33.2
2256
Male, age 80, left hemisphere
32.3
1883
Male, age 76, both hemispheres
30.9
2516
Male, age 75, right hemisphere
23.5
2830
Female, age 67, right hemisphere
12.5
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
53.3
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 53.3
Samples: 152
Max nTPM: 158.1
Min nTPM: 7.0
Std nTPM: 24.6
Median nTPM: 47.0
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
158.1
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
139.4
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
125.7
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
114.0
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
111.3
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
109.3
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
105.2
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
101.2
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
97.0
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
96.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
96.5
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
93.0
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
91.2
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
88.8
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
85.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
84.9
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
80.8
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
80.4
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
80.0
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
78.4
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
78.3
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
76.9
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
76.7
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
76.1
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
76.0
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
74.0
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
74.0
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
73.9
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
73.0
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
72.4
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
70.2
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
69.4
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
69.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
69.1
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
68.5
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
68.4
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
67.5
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
65.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
64.3
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
63.8
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
63.8
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
63.7
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
63.2
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
62.8
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
62.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
61.9
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
61.2
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
61.1
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
60.9
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
59.3
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
59.2
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
58.7
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
57.9
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
57.7
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
57.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
56.3
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
55.9
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
55.6
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
54.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
54.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
54.7
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
53.7
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
53.5
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
52.9
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
51.7
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
51.6
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
51.5
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
51.0
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
50.5
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
50.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
48.2
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
47.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
47.5
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
47.3
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
47.2
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
47.1
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
46.9
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
46.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
46.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
46.2
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
46.0
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
45.6
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
45.0
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
44.7
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
44.4
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
44.2
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
44.1
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
44.0
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
43.7
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
42.9
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
42.7
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
42.3
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
41.5
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
41.3
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
40.8
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
40.7
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
39.8
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
39.8
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
39.7
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
39.6
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
39.2
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
39.1
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
39.1
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
38.8
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
38.7
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
38.3
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
38.0
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
37.0
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
36.8
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
36.7
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
36.7
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
36.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
36.3
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
36.0
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
36.0
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
35.9
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
35.3
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
35.2
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
35.2
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
34.4
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
34.3
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
33.8
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
33.8
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
33.5
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
33.4
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
32.7
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
32.4
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
31.4
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
31.4
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
31.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
30.8
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
30.8
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
30.3
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
30.3
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
30.1
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
29.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
29.0
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
28.7
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
27.9
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
27.9
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
27.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
27.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
26.4
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
26.0
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
24.7
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
24.5
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
23.2
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
21.3
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
16.5
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
16.4
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
13.1
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
7.0
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.