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On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
No data
RNA expressioni
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
Consensus:
122.1
nTPM
HPA Brain:
87.9
nTPM
GTEx:
122.1
nTPM
FANTOM5:
0.3
Scaled Tags Per Million
Pig:
2.1
nTPM
Mouse:
2.0
nTPM
Allen mouse:
0.1
Expression energy
AMYGDALA - Annotated protein expression
Pending normal tissue analysis
AMYGDALA - HPA Brain RNA-seq
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
87.9
Sample id
Sample description
nTPM
Amygdala nTPM: 46.5
1987
Female, age 91, left hemisphere
67.6
2517
Female, age 94, left hemisphere
54.2
2814
Male, age 76, right hemisphere
46.9
2514
Male, age 75, right hemisphere
32.6
2695
Female, age 67, right hemisphere
31.0
Basal amygdala nTPM: 76.1
2827
Female, age 67, right hemisphere
107.2
1955
Male, age 76, both hemispheres
87.8
2243
Female, age 91, right hemisphere
75.3
2685
Female, age 94, left hemisphere
67.5
2609
Male, age 75, right hemisphere
66.7
2110
Male, age 80, left hemisphere
52.1
Central amygdala nTPM: 76.4
2826
Female, age 94, left hemisphere
99.0
1905
Male, age 76, both hemispheres
87.9
2239
Male, age 80, left hemisphere
73.0
2515
Male, age 75, right hemisphere
61.4
2701
Female, age 91, right hemisphere
60.8
Corticomedial amygdala nTPM: 71.5
2535
Female, age 67, right hemisphere
183.9
2242
Female, age 91, right hemisphere
66.9
2428
Male, age 75, right hemisphere
52.9
2429
Female, age 94, left hemisphere
52.4
2240
Male, age 76, both hemispheres
38.7
2829
Male, age 80, left hemisphere
34.2
Lateral amygdala nTPM: 87.9
2256
Male, age 80, left hemisphere
144.0
2534
Female, age 94, left hemisphere
128.4
2255
Female, age 91, right hemisphere
108.1
2830
Female, age 67, right hemisphere
55.2
1883
Male, age 76, both hemispheres
49.4
2516
Male, age 75, right hemisphere
42.3
AMYGDALA - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
122.1
GTEx sample id
Sample description
nTPM
Brain - Amygdala Average nTPM: 122.1
Samples: 152
Max nTPM: 526.8
Min nTPM: 7.1
Std nTPM: 65.9
Median nTPM: 111.8
GTEX-17EVQ-0011-R4b-SM-7LT94
70-79 years, male
526.8
GTEX-1GF9W-0011-R4a-SM-CE6RH
60-69 years, male
289.7
GTEX-14ASI-0011-R4a-SM-69LQ4
60-69 years, male
284.6
GTEX-1HBPH-0011-R4a-SM-A96RX
40-49 years, female
268.7
GTEX-18464-0011-R4a-SM-7LG6T
50-59 years, male
258.9
GTEX-1GMR8-0011-R4a-SM-9OSX1
50-59 years, female
253.5
GTEX-12ZZW-0011-R4a-SM-5DUX9
50-59 years, male
244.4
GTEX-13OVH-0011-R4a-SM-5KM3W
70-79 years, male
242.3
GTEX-13JVG-0011-R4a-SM-5MR4C
60-69 years, male
225.6
GTEX-1GZ4I-0011-R4a-SM-9QEI9
50-59 years, male
222.3
GTEX-1C6WA-0011-R4a-SM-9QEH2
60-69 years, male
204.9
GTEX-1F6IF-0011-R4b-SM-CKZNJ
60-69 years, male
204.7
GTEX-1EX96-0011-R4a-SM-ARU82
50-59 years, male
203.7
GTEX-13CZV-0011-R4b-SM-5J2NY
60-69 years, male
202.5
GTEX-1C6VR-0011-R4b-SM-9QEGZ
60-69 years, male
201.1
GTEX-1J8Q2-0011-R4a-SM-ADEHA
60-69 years, male
197.4
GTEX-12ZZZ-0011-R4b-SM-5DUV7
60-69 years, male
195.1
GTEX-ZE9C-0011-R4a-SM-4WKH6
60-69 years, male
194.4
GTEX-1E1VI-0011-R4b-SM-9QEHV
50-59 years, male
190.7
GTEX-145LS-0011-R4b-SM-5S2UT
60-69 years, female
190.4
GTEX-1CB4G-0011-R4b-SM-CJI28
60-69 years, male
186.9
GTEX-1JMQJ-0011-R4b-SM-EXUT8
50-59 years, male
184.3
GTEX-144GL-0011-R4a-SM-5PNUI
50-59 years, male
183.4
GTEX-13VXU-0011-R4b-SM-5O9CI
50-59 years, male
182.0
GTEX-1GTWX-0011-R4a-SM-C1YQI
60-69 years, male
180.1
GTEX-1H1CY-0011-R4b-SM-CJI3G
60-69 years, female
176.9
GTEX-14PQA-0011-R4b-SM-6AJBU
50-59 years, female
175.1
GTEX-1JJEA-0011-R4a-SM-EXUTC
60-69 years, male
174.2
GTEX-13OVL-0011-R4b-SM-5L3HV
50-59 years, male
173.7
GTEX-1N2EE-0011-R4a-SM-EXOII
60-69 years, male
172.9
GTEX-1H3O1-0011-R4b-SM-A9SKE
60-69 years, male
163.1
GTEX-13QIC-0011-R4a-SM-5PNX8
60-69 years, female
161.6
GTEX-1F75A-0011-R4a-SM-ARL8J
50-59 years, male
161.6
GTEX-1313W-0011-R4b-SM-5KLZV
50-59 years, female
161.5
GTEX-1B8L1-0011-R4a-SM-7EWFJ
60-69 years, male
161.5
GTEX-1399T-0011-R4b-SM-5DUVX
60-69 years, male
161.1
GTEX-11ZU8-0011-R4a-SM-5BC6Y
60-69 years, male
160.7
GTEX-17HG3-0011-R4a-SM-7IGLL
30-39 years, female
160.7
GTEX-1A3MX-0011-R4b-SM-7EWFK
60-69 years, male
155.3
GTEX-1F7RK-0011-R4b-SM-9QEI7
20-29 years, female
154.5
GTEX-13O3Q-0011-R4a-SM-5P9H2
50-59 years, male
153.9
GTEX-13X6K-0011-R4b-SM-5P9HO
60-69 years, female
153.3
GTEX-12WSF-0011-R4b-SM-5HL88
70-79 years, male
149.2
GTEX-14DAQ-0011-R4a-SM-5YYAI
60-69 years, female
149.1
GTEX-1HFI6-0011-R4b-SM-A96RT
40-49 years, male
149.1
GTEX-14PJM-0011-R4a-SM-5YYAS
50-59 years, female
148.5
GTEX-13N1W-0011-R4a-SM-5MR52
70-79 years, male
148.0
GTEX-13SLX-0011-R4a-SM-5O9BJ
50-59 years, female
147.7
GTEX-P44G-0011-R4A-SM-2I3FB
30-39 years, male
144.9
GTEX-11PRG-0011-R4a-SM-DNZZR
50-59 years, male
143.6
GTEX-13O3O-0011-R4b-SM-5KM3F
60-69 years, female
142.0
GTEX-13X6J-0011-R4b-SM-5P9K4
50-59 years, male
140.9
GTEX-13FLV-0011-R4a-SM-5LZYU
50-59 years, male
139.6
GTEX-11NUK-0011-R4a-SM-DO12B
50-59 years, male
131.5
GTEX-14JFF-0011-R4a-SM-5ZZV5
60-69 years, male
131.3
GTEX-131XH-0011-R4b-SM-5DUWB
50-59 years, male
130.7
GTEX-17EVP-0011-R4a-SM-79OML
40-49 years, male
129.6
GTEX-NPJ7-0011-R4a-SM-2I3GJ
60-69 years, female
126.6
GTEX-13112-0011-R4b-SM-5DUXL
50-59 years, male
126.5
GTEX-X4XX-0011-R4B-SM-46MWL
60-69 years, male
125.4
GTEX-1I1GR-0011-R4a-SM-CMKHC
60-69 years, male
125.3
GTEX-13OW8-0011-R4a-SM-9WG6V
60-69 years, male
124.6
GTEX-13OW6-0011-R4a-SM-5O9DX
50-59 years, male
123.7
GTEX-17F97-0011-R4b-SM-7KFS2
50-59 years, male
123.1
GTEX-1HBPI-0011-R4a-SM-CJI3K
50-59 years, male
122.8
GTEX-XLM4-0011-R4B-SM-4AT5C
60-69 years, male
122.5
GTEX-15ER7-0011-R4a-SM-6M46S
20-29 years, female
122.1
GTEX-1HCU6-0011-R4b-SM-ARU74
60-69 years, female
120.9
GTEX-13OW5-0011-R4b-SM-5L3HS
60-69 years, male
120.0
GTEX-12WSD-0011-R4b-SM-5LZUA
60-69 years, female
119.4
GTEX-15SHU-0011-R4b-SM-7IGLC
40-49 years, female
117.1
GTEX-1ICLZ-0011-R4a-SM-CMKHL
60-69 years, male
115.9
GTEX-OHPN-0011-R4A-SM-2I5FD
60-69 years, female
115.3
GTEX-15EO6-0011-R4a-SM-7KUKZ
50-59 years, male
115.0
GTEX-NL3H-0011-R4a-SM-2I3GK
60-69 years, male
114.3
GTEX-15DDE-0011-R4b-SM-7KULI
50-59 years, female
112.5
GTEX-1445S-0011-R4a-SM-5PNWN
60-69 years, male
111.1
GTEX-1F48J-0011-R4b-SM-9OSVX
50-59 years, female
110.5
GTEX-14BIM-0011-R4b-SM-5S2RK
60-69 years, female
109.8
GTEX-14JIY-0011-R4b-SM-5ZZV7
60-69 years, male
108.5
GTEX-ZVZQ-0011-R4b-SM-57WCZ
60-69 years, female
107.4
GTEX-1JN6P-0011-R4a-SM-EZ6MS
60-69 years, male
105.5
GTEX-Y8DK-0011-R4A-SM-EXUR1
60-69 years, male
104.7
GTEX-13OW7-0011-R4b-SM-5O9CX
50-59 years, male
104.4
GTEX-11ONC-0011-R4b-SM-DO93H
60-69 years, male
103.1
GTEX-183WM-0011-R4a-SM-7LG6S
70-79 years, female
102.9
GTEX-1AX9I-0011-R4b-SM-7EPIB
60-69 years, male
100.2
GTEX-1J8EW-0011-R4b-SM-ARU89
60-69 years, female
99.9
GTEX-12WSH-0011-R4a-SM-5GU6K
50-59 years, male
99.4
GTEX-13NYS-0011-R4b-SM-5MR3O
60-69 years, male
99.3
GTEX-13PVQ-0011-R4a-SM-5O9CT
50-59 years, male
97.7
GTEX-1LVAO-0011-R4a-SM-EXURO
60-69 years, male
94.9
GTEX-T5JC-0011-R4A-SM-32PLT
20-29 years, male
93.1
GTEX-13NYB-0011-R4b-SM-9QEGJ
40-49 years, male
92.6
GTEX-14ABY-0011-R4b-SM-5S2VN
50-59 years, male
92.0
GTEX-1LSVX-0011-R4b-SM-EXURP
60-69 years, male
91.2
GTEX-13N2G-0011-R4b-SM-5MR54
60-69 years, male
91.1
GTEX-NL4W-0011-R4a-SM-2I5GZ
50-59 years, male
91.0
GTEX-15DYW-0011-R4a-SM-6M46V
60-69 years, female
89.6
GTEX-WZTO-0011-R4A-SM-3NMC7
40-49 years, male
88.8
GTEX-ZAK1-0011-R4a-SM-6AJBK
50-59 years, female
87.8
GTEX-1HB9E-0011-R4b-SM-ARZLS
50-59 years, male
87.8
GTEX-NPJ8-0011-R4a-SM-2HML3
40-49 years, male
87.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ
70-79 years, male
86.0
GTEX-ZAB4-0011-R4a-SM-4SOKB
40-49 years, male
85.2
GTEX-1B996-0011-R4b-SM-9OSVO
60-69 years, male
84.6
GTEX-1H1ZS-0011-R4b-SM-CKZO7
70-79 years, male
84.2
GTEX-WHSE-0011-R4A-SM-3P5ZN
20-29 years, male
83.8
GTEX-WVLH-0011-R4A-SM-3MJFS
50-59 years, male
83.4
GTEX-131YS-0011-R4a-SM-5DUVL
60-69 years, female
79.1
GTEX-RNOR-0011-R4A-SM-3GAD3
50-59 years, female
79.1
GTEX-1GN73-0011-R4b-SM-9QEIK
60-69 years, male
79.1
GTEX-13SLW-0011-R4b-SM-5S2W2
70-79 years, male
79.0
GTEX-11TTK-0011-R4a-SM-DNZZU
60-69 years, female
77.6
GTEX-13X6I-0011-R4b-SM-5PNU9
60-69 years, male
77.5
GTEX-139T8-0011-R4a-SM-5HL54
60-69 years, male
77.3
GTEX-YFC4-0011-R4a-SM-4RGLQ
40-49 years, female
76.9
GTEX-12WSA-0011-R4a-SM-57WB7
60-69 years, male
76.2
GTEX-147GR-0011-R4a-SM-5S2V2
60-69 years, male
75.6
GTEX-16YQH-0011-R4a-SM-7EPGI
30-39 years, male
75.3
GTEX-1H23P-0011-R4b-SM-CL54R
60-69 years, male
74.2
GTEX-Q2AG-0011-R4A-SM-2HMKA
40-49 years, female
73.9
GTEX-1J1OQ-0011-R4a-SM-D4P2A
40-49 years, female
71.8
GTEX-15DCD-0011-R4a-SM-69LPB
70-79 years, female
70.5
GTEX-QVJO-0011-R4A-SM-2S1QL
60-69 years, female
70.3
GTEX-S7SE-0011-R4A-SM-2XCDB
50-59 years, male
67.5
GTEX-X585-0011-R4B-SM-46MVH
50-59 years, male
67.2
GTEX-TSE9-0011-R4A-SM-3DB7H
60-69 years, female
66.2
GTEX-1EMGI-0011-R4b-SM-CJI2D
60-69 years, male
64.9
GTEX-15CHQ-0011-R4a-SM-686ZX
60-69 years, male
64.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z
50-59 years, female
63.8
GTEX-R55E-0011-R4A-SM-2TC5H
20-29 years, male
63.5
GTEX-14PN4-0011-R4a-SM-686ZT
50-59 years, male
62.5
GTEX-13RTJ-0011-R4b-SM-5PNX1
60-69 years, male
58.9
GTEX-14JG1-0011-R4b-SM-62LEB
40-49 years, male
55.0
GTEX-1H2FU-0011-R4a-SM-CL551
60-69 years, female
54.1
GTEX-13OVJ-0011-R4b-SM-5P9H5
50-59 years, female
52.3
GTEX-N7MT-0011-R4a-SM-2I3G9
60-69 years, female
49.6
GTEX-QDT8-0011-R4A-SM-32PKM
30-39 years, female
48.7
GTEX-N7MS-0011-R4a-SM-2HMKW
60-69 years, male
48.2
GTEX-QMR6-0011-R4A-SM-32PKU
50-59 years, male
46.9
GTEX-14E7W-0011-R4b-SM-62LEA
70-79 years, male
46.5
GTEX-1IY9M-0011-R4a-SM-C1YQ2
60-69 years, male
45.3
GTEX-1H3NZ-0011-R4a-SM-CL54T
60-69 years, male
44.9
GTEX-UTHO-0011-R4A-SM-3GIJP
60-69 years, male
44.6
GTEX-T6MN-0011-R4A-SM-32QPG
50-59 years, male
41.8
GTEX-1N2DW-0011-R4b-SM-EZ6MD
50-59 years, male
41.7
GTEX-P44H-0011-R4A-SM-2XCEW
40-49 years, male
23.1
GTEX-145MI-0011-R4b-SM-5PNZH
60-69 years, female
21.4
GTEX-X4EP-0011-R4B-SM-3P627
60-69 years, female
7.9
GTEX-QVUS-0011-R4A-SM-3GAE7
60-69 years, female
7.8
GTEX-1CB4J-0011-R4b-SM-9WG5P
60-69 years, male
7.1
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AMYGDALA - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Max subtype Scaled Tags Per Millioni
Max subtype Scaled Tags Per Million is the value for the subtype with the largest average Scaled Tags Per Million across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max subtype nTPMi
Max subtype nTPM is the value for the subtype with the largest average nTPM across the subtype samples.
2.0
Mouse sample
Sample description
nTPM
Amygdala nTPM: 2.1
Samples: 4
Max nTPM: 3.0
Min nTPM: 1.3
Sample A
Male
1.4
Sample B
Male
1.3
Sample C
Female
2.5
Sample D
Female
3.0
AMYGDALA - Allen Mouse ISHi
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.
Max subtype Expression energyi
Max subtype Expression energy is the value for the subtype with the largest average Expression energy across the subtype samples.