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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCDC152 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
32.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
1214.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
967.8
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
688.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
650.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
398.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
347.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
337.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
310.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
292.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
264.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
238.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
217.7
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
186.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
170.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
153.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
135.5
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
124.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
117.6
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
112.6
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
92.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
87.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
79.2
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
70.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
70.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
67.9
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
67.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
64.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
55.9
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
55.9
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
55.2
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
55.1
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
53.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
51.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
49.5
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
48.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
45.7
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
44.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
42.2
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
42.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
41.2
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
40.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
39.2
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
38.5
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
36.9
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
35.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
34.1
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
32.2
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
31.2
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
30.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
29.8
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
28.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
28.2
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
27.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
26.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
26.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
26.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
26.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
26.0
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
25.9
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
25.5
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
24.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
24.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
23.2
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
22.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
22.8
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
22.7
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
22.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
22.3
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
22.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
21.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
21.4
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
21.0
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
20.8
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
20.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
20.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
20.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
19.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
19.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
19.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
19.4
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
19.4
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
19.3
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
18.6
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
18.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
18.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
18.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
18.2
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
18.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
17.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
17.5
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
17.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
17.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
17.2
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
17.2
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
17.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
16.9
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
16.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
16.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
16.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
16.4
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
16.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
16.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
16.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
16.0
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
16.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
16.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
15.7
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
15.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
15.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
15.4
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
15.3
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
15.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
15.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
15.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
14.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
14.8
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
14.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
14.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
14.3
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
14.1
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
14.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
13.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
13.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
13.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
13.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
13.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
13.4
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
13.4
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
13.3
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
13.1
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
13.1
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
13.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
13.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
13.0
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
12.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
12.8
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
12.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
12.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
12.5
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
12.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
12.4
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
12.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
12.2
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
12.1
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
12.1
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
12.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
12.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
12.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
12.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
11.9
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
11.9
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
11.7
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
11.6
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
11.6
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
11.5
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
11.4
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
11.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
11.4
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
11.2
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
11.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
11.1
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.1
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
11.0
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
11.0
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
10.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
10.9
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
10.8
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
10.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
10.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
10.6
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
10.5
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
10.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
10.5
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
10.5
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
10.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
10.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.3
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
10.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
10.2
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
10.2
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
10.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
10.1
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
10.0
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
10.0
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
9.9
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
9.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9.8
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
9.6
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
9.6
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
9.6
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
9.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
9.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
9.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
9.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
9.5
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
9.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
9.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
9.3
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
9.3
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
9.0
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
9.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
9.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
8.9
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
8.9
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
8.9
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
8.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
8.7
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
8.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
8.4
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
8.4
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
8.4
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
8.3
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.2
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
8.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
8.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
8.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
8.0
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
8.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
8.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
8.0
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
8.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
7.9
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
7.9
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
7.9
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
7.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
7.7
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
7.7
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
7.6
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
7.5
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
7.5
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.5
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
7.5
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
7.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
7.4
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
7.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
7.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
7.3
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
7.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
7.2
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
7.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
7.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
7.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.1
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
7.0
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
7.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
6.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
6.9
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
6.8
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
6.8
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
6.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
6.8
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
6.8
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
6.7
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
6.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.7
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
6.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
6.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
6.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.6
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
6.5
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
6.5
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
6.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
6.4
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
6.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
6.3
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
6.2
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
6.2
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
6.2
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.1
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
6.1
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
6.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.0
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
6.0
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
6.0
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.0
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
5.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
5.9
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
5.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
5.9
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
5.8
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
5.8
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
5.8
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
5.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
5.5
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
5.4
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
5.4
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
5.4
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
5.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
5.2
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
5.1
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
5.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
5.0
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
5.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
5.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
4.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
4.9
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
4.9
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
4.9
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
4.8
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
4.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
4.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
4.7
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
4.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
4.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
4.5
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
4.4
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
4.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
4.3
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
4.3
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
4.3
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
4.2
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
4.2
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
4.1
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
4.1
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
3.9
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
3.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
3.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
3.8
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
3.8
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
3.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
3.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
3.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
3.4
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
3.3
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
3.1
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
3.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
3.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
3.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
2.9
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
2.9
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
2.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
2.8
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
2.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
2.6
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
2.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
2.3
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
2.2
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
2.2
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
1.9
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
1.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
1.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
1.5
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1.3
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
1.2
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
1.0
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
0.9
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
0.8
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
0.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
0.4
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
CCDC152 is potential prognostic, high expression is favorable in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
718.2
Number of samples
231
Samples
Sample
Description
TPM
DO48741
0 years, male, NA, stage:3, alive, 240 days
3379.2
DO23514
0 years, male, NA, stage:2, alive, 1290 days
2677.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
2138.5
DO45133
0 years, male, NA, stage:3, dead, 660 days
2098.2
DO23513
0 years, male, NA, stage:3, alive, 1200 days
2034.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
1986.5
DO23529
0 years, male, NA, stage:4, alive, 930 days
1979.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
1918.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
1901.9
DO23531
0 years, female, NA, stage:3, alive, 900 days
1863.8
DO23536
0 years, male, NA, stage:2, alive, 930 days
1799.5
DO50832
0 years, male, NA, stage:3, alive, 90 days
1701.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
1623.9
DO23538
0 years, male, NA, stage:2, alive, 450 days
1574.8
DO45275
0 years, male, NA, stage:3, dead, 10 days
1539.0
DO50793
0 years, male, NA, stage:4, alive, 540 days
1527.7
DO45119
0 years, male, NA, stage:3, dead, 510 days
1498.1
DO48701
0 years, male, NA, stage:2, alive, 780 days
1461.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
1460.8
DO48721
0 years, female, NA, stage:1, alive, 900 days
1457.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
1451.9
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1437.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
1420.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
1406.6
DO23524
0 years, female, NA, stage:2, alive, 1050 days
1386.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
1380.2
DO50783
0 years, male, NA, stage:3, alive, 480 days
1336.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
1269.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
1246.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
1240.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
1221.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
1217.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
1216.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
1215.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
1204.6
DO45099
0 years, male, NA, stage:3, alive, 1590 days
1189.5
DO45247
0 years, female, NA, stage:2, alive, 210 days
1186.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
1185.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
1162.1
DO45227
0 years, female, NA, stage:2, alive, 1020 days
1124.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1117.4
DO45223
0 years, male, NA, stage:4, alive, 1020 days
1100.6
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1077.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
1077.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
1070.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
1062.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1057.7
DO50825
0 years, male, NA, stage:2, alive, 390 days
1054.8
DO23517
0 years, male, NA, stage:2, alive, 1200 days
1037.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
1034.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1014.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
1010.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
1004.8
DO45215
0 years, male, NA, stage:2, alive, 1170 days
993.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
987.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
973.5
DO23516
0 years, male, NA, stage:3, dead, 20 days
959.9
DO45095
0 years, male, NA, stage:2, alive, 1620 days
947.2
DO45094
0 years, male, NA, stage:3, alive, 1650 days
945.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
936.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
928.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
923.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
920.3
DO45229
0 years, male, NA, stage:1, alive, 990 days
919.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
910.3
DO48693
0 years, male, NA, stage:2, alive, 900 days
898.9
DO23527
0 years, male, NA, stage:1, alive, 1050 days
893.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
892.5
DO48759
0 years, male, NA, stage:3, alive, 720 days
889.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
882.3
DO45257
0 years, male, NA, stage:3, alive, 810 days
869.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
859.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
846.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
843.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
840.3
DO50818
0 years, male, NA, stage:2, alive, 510 days
837.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
829.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
818.9
DO50807
0 years, male, NA, stage:1, alive, 540 days
808.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
777.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
775.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
772.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
771.0
DO48760
0 years, female, NA, stage:2, alive, 690 days
769.1
DO45139
0 years, male, NA, stage:3, alive, 1320 days
767.5
DO48723
0 years, male, NA, stage:1, alive, 600 days
766.6
DO45153
0 years, female, NA, stage:2, alive, 1380 days
761.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
759.4
DO50817
0 years, male, NA, stage:2, alive, 390 days
756.7
DO48700
0 years, female, NA, stage:2, alive, 810 days
755.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
754.0
DO50787
0 years, male, NA, stage:3, alive, 480 days
751.0
DO23537
0 years, male, NA, stage:2, dead, 900 days
750.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
741.0
DO45187
0 years, female, NA, stage:1, alive, 1260 days
733.8
DO23521
0 years, male, NA, stage:3, alive, 1110 days
728.4
DO48761
0 years, male, NA, stage:2, alive, 870 days
725.0
DO45125
0 years, male, NA, stage:3, alive, 1680 days
719.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
709.9
DO50811
0 years, male, NA, stage:1, alive, 450 days
698.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
697.3
DO23545
0 years, male, NA, stage:2, dead, 570 days
690.2
DO45237
0 years, male, NA, stage:2, alive, 900 days
687.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
685.3
DO45143
0 years, male, NA, stage:3, alive, 1290 days
683.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
679.2
DO45115
0 years, male, NA, stage:2, alive, 840 days
679.1
DO45149
0 years, female, NA, stage:2, alive, 1260 days
676.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
660.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
658.7
DO50806
0 years, male, NA, stage:4, alive, 540 days
656.1
DO23525
0 years, male, NA, stage:4, alive, 1050 days
648.3
DO48733
0 years, male, NA, stage:2, alive, 600 days
645.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
637.8
DO45101
0 years, male, NA, stage:2, alive, 1680 days
634.8
DO23533
0 years, male, NA, stage:2, alive, 900 days
631.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
630.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
627.5
DO45221
0 years, female, NA, stage:4, dead, 390 days
620.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
582.2
DO45213
0 years, male, NA, stage:1, alive, 1200 days
572.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
571.4
DO50829
0 years, male, NA, stage:3, alive, 570 days
568.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
568.4
DO48704
0 years, female, NA, stage:3, alive, 750 days
557.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
550.0
DO45137
0 years, male, NA, stage:1, alive, 1320 days
548.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
547.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
547.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
541.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
527.8
DO45141
0 years, male, NA, stage:2, alive, 1320 days
527.6
DO23508
0 years, female, NA, stage:2, alive, 390 days
526.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
525.7
DO50809
0 years, male, NA, stage:3, dead, 720 days
514.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
511.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
510.0
DO45203
0 years, female, NA, stage:2, alive, 1170 days
503.5
DO23540
0 years, male, NA, stage:1, alive, 750 days
501.3
DO23544
0 years, male, NA, stage:2, alive, 960 days
491.0
DO50820
0 years, female, NA, stage:3, alive, 510 days
489.9
DO50839
0 years, female, NA, stage:3, alive, 330 days
488.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
487.8
DO50855
0 years, male, NA, stage:2, alive, 570 days
481.6
DO48715
0 years, female, NA, stage:2, dead, 690 days
475.7
DO45231
0 years, male, NA, stage:2, alive, 930 days
475.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
473.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
469.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
464.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
462.5
DO48736
0 years, female, NA, stage:1, alive, 600 days
454.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
453.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
453.6
DO45217
0 years, female, NA, stage:3, dead, 270 days
453.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
450.5
DO45265
0 years, male, NA, stage:3, alive, 1020 days
450.1
DO45263
0 years, male, NA, stage:3, dead, 270 days
446.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
441.1
DO45135
0 years, male, NA, stage:1, alive, 1410 days
441.0
DO50819
0 years, female, NA, stage:2, alive, 510 days
439.2
DO45225
0 years, male, NA, stage:1, alive, 1050 days
438.9
DO48706
0 years, male, NA, stage:2, alive, 870 days
432.0
DO45219
0 years, male, NA, stage:2, alive, 1080 days
431.2
DO23535
0 years, male, NA, stage:1, alive, 960 days
430.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
427.0
DO48757
0 years, female, NA, stage:3, alive, 480 days
418.3
DO48717
0 years, male, NA, stage:4, dead, 180 days
407.7
DO48679
0 years, male, NA, stage:2, alive, 1200 days
407.1
DO23548
0 years, female, NA, stage:1, alive, 840 days
406.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
394.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
387.7
DO50805
0 years, male, NA, stage:2, alive, 690 days
381.2
DO50803
0 years, female, NA, stage:1, alive, 540 days
374.8
DO45121
0 years, male, NA, stage:3, alive, 1530 days
367.4
DO45105
0 years, male, NA, stage:1, alive, 1680 days
358.7
DO50798
0 years, male, NA, stage:3, dead, 30 days
358.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
357.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
357.7
DO48720
0 years, female, NA, stage:2, alive, 570 days
353.9
DO45241
0 years, male, NA, stage:1, alive, 1080 days
347.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
344.6
DO23546
0 years, male, NA, stage:2, alive, 1050 days
341.8
DO45193
0 years, female, NA, stage:4, dead, 120 days
324.0
DO50785
0 years, male, NA, stage:4, dead, 90 days
321.6
DO48728
0 years, female, NA, stage:2, alive, 150 days
316.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
307.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
306.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
303.6
DO50778
0 years, male, NA, stage:4, alive, 630 days
301.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
298.7
DO45269
0 years, male, NA, stage:3, alive, 750 days
295.7
DO48732
0 years, male, NA, stage:3, alive, 630 days
288.8
DO48747
0 years, male, NA, stage:3, alive, 540 days
288.5
DO45165
0 years, male, NA, stage:2, alive, 690 days
286.6
DO50799
0 years, female, NA, stage:2, alive, 540 days
281.6
DO48730
0 years, female, NA, stage:2, alive, 630 days
267.7
DO48737
0 years, male, NA, stage:1, alive, 720 days
266.0
DO23515
0 years, male, NA, stage:2, alive, 1230 days
261.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
261.1
DO45273
0 years, male, NA, stage:2, alive, 480 days
253.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
252.0
DO45205
0 years, female, NA, stage:2, dead, 90 days
251.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
239.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
230.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
205.0
DO45251
0 years, female, NA, stage:2, alive, 900 days
154.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
153.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
148.0
DO23547
0 years, male, NA, stage:1, alive, 1020 days
139.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
124.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
116.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
113.3
DO50815
0 years, male, NA, stage:3, alive, 150 days
107.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
106.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
92.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
82.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
82.2
DO45259
0 years, male, NA, stage:3, alive, 330 days
81.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
59.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
58.8
DO45283
0 years, male, NA, stage:3, alive, 510 days
53.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
41.3
DO45287
0 years, male, NA, stage:1, alive, 390 days
37.7
DO45301
0 years, male, NA, stage:2, dead, 1440 days
36.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
33.5
DO45305
0 years, male, NA, stage:4, alive, 300 days
32.8
DO45209
0 years, male, NA, stage:4, alive, 1350 days
31.9
DO45297
0 years, female, NA, stage:4, dead, 1260 days
20.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
19.4
DO45299
0 years, female, NA, stage:1, alive, 1440 days
18.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
15.6
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
471
Tumor
N/A
351
Tumor
N/A
472
Normal
N/A
231
Tumor
N/A
352
Normal
N/A
473
Tumor
N/A
111
Normal
N/A
232
Normal
N/A
353
Tumor
N/A
474
Normal
N/A
112
Tumor
N/A
354
Normal
N/A
113
Tumor
N/A
355
Tumor
N/A
114
Normal
N/A
356
Normal
N/A
477
Tumor
N/A
357
Tumor
N/A
478
Normal
N/A
358
Normal
N/A
911
Tumor
N/A
912
Normal
N/A
913
Tumor
N/A
914
Normal
N/A
915
Tumor
N/A
916
Normal
N/A
917
Tumor
N/A
918
Normal
N/A
481
Tumor
N/A
361
Tumor
N/A
482
Normal
N/A
362
Normal
N/A
483
Tumor
N/A
363
Tumor
N/A
484
Normal
N/A
364
Normal
N/A
123
Tumor
N/A
365
Tumor
N/A
124
Normal
N/A
366
Normal
N/A
487
Tumor
N/A
125
Tumor
N/A
367
Tumor
N/A
488
Normal
N/A
126
Normal
N/A
368
Normal
N/A
127
Tumor
N/A
128
Normal
N/A
921
Tumor
N/A
922
Normal
N/A
923
Tumor
N/A
924
Normal
N/A
925
Tumor
N/A
926
Normal
N/A
491
Tumor
N/A
492
Normal
N/A
493
Tumor
N/A
131
Tumor
N/A
494
Normal
N/A
132
Normal
N/A
375
Tumor
N/A
376
Normal
N/A
497
Tumor
N/A
135
Tumor
N/A
498
Normal
N/A
136
Normal
N/A
257
Tumor
N/A
137
Tumor
N/A
258
Normal
N/A
138
Normal
N/A
813
Tumor
N/A
814
Normal
N/A
815
Tumor
N/A
816
Normal
N/A
937
Tumor
N/A
817
Tumor
N/A
938
Normal
N/A
818
Normal
N/A
261
Tumor
N/A
141
Tumor
N/A
262
Normal
N/A
383
Tumor
N/A
142
Normal
N/A
384
Normal
N/A
385
Tumor
N/A
386
Normal
N/A
145
Tumor
N/A
387
Tumor
N/A
146
Normal
N/A
267
Tumor
N/A
388
Normal
N/A
147
Tumor
N/A
268
Normal
N/A
148
Normal
N/A
943
Tumor
N/A
823
Tumor
N/A
944
Normal
N/A
824
Normal
N/A
1022
Normal
N/A
1021
Tumor
N/A
391
Tumor
N/A
271
Tumor
N/A
392
Normal
N/A
272
Normal
N/A
393
Tumor
N/A
394
Normal
N/A
395
Tumor
N/A
396
Normal
N/A
277
Tumor
N/A
1016
Normal
N/A
278
Normal
N/A
1015
Tumor
N/A
1014
Normal
N/A
951
Tumor
N/A
1013
Tumor
N/A
952
Normal
N/A
953
Tumor
N/A
954
Normal
N/A
713
Tumor
N/A
955
Tumor
N/A
714
Normal
N/A
956
Normal
N/A
715
Tumor
N/A
957
Tumor
N/A
716
Normal
N/A
958
Normal
N/A
1032
Normal
N/A
1031
Tumor
N/A
161
Tumor
N/A
162
Normal
N/A
283
Tumor
N/A
284
Normal
N/A
285
Tumor
N/A
286
Normal
N/A
1028
Normal
N/A
1027
Tumor
N/A
1026
Normal
N/A
1025
Tumor
N/A
721
Tumor
N/A
963
Tumor
N/A
722
Normal
N/A
964
Normal
N/A
723
Tumor
N/A
965
Tumor
N/A
724
Normal
N/A
966
Normal
N/A
967
Tumor
N/A
968
Normal
N/A
727
Tumor
N/A
728
Normal
N/A
1044
Normal
N/A
1043
Tumor
N/A
1042
Normal
N/A
1041
Tumor
N/A
171
Tumor
N/A
172
Normal
N/A
297
Tumor
N/A
298
Normal
N/A
851
Tumor
N/A
852
Normal
N/A
975
Tumor
N/A
976
Normal
N/A
977
Tumor
N/A
615
Tumor
N/A
857
Tumor
N/A
978
Normal
N/A
616
Normal
N/A
737
Tumor
N/A
858
Normal
N/A
617
Tumor
N/A
738
Normal
N/A
618
Normal
N/A
185
Tumor
N/A
186
Normal
N/A
187
Tumor
N/A
188
Normal
N/A
981
Tumor
N/A
861
Tumor
N/A
982
Normal
N/A
741
Tumor
N/A
862
Normal
N/A
983
Tumor
N/A
742
Normal
N/A
863
Tumor
N/A
984
Normal
N/A
1046
Normal
N/A
743
Tumor
N/A
864
Normal
N/A
1045
Tumor
N/A
744
Normal
N/A
865
Tumor
N/A
745
Tumor
N/A
866
Normal
N/A
746
Normal
N/A
867
Tumor
N/A
868
Normal
N/A
627
Tumor
N/A
628
Normal
N/A
191
Tumor
N/A
192
Normal
N/A
195
Tumor
N/A
196
Normal
N/A
873
Tumor
N/A
874
Normal
N/A
513
Tumor
N/A
755
Tumor
N/A
514
Normal
N/A
635
Tumor
N/A
756
Normal
N/A
877
Tumor
N/A
515
Tumor
N/A
636
Normal
N/A
878
Normal
N/A
516
Normal
N/A
517
Tumor
N/A
518
Normal
N/A
881
Tumor
N/A
882
Normal
N/A
641
Tumor
N/A
883
Tumor
N/A
642
Normal
N/A
884
Normal
N/A
523
Tumor
N/A
524
Normal
N/A
525
Tumor
N/A
526
Normal
N/A
647
Tumor
N/A
527
Tumor
N/A
648
Normal
N/A
528
Normal
N/A
411
Tumor
N/A
412
Normal
N/A
533
Tumor
N/A
413
Tumor
N/A
534
Normal
N/A
414
Normal
N/A
535
Tumor
N/A
777
Tumor
N/A
415
Tumor
N/A
536
Normal
N/A
778
Normal
N/A
416
Normal
N/A
537
Tumor
N/A
538
Normal
N/A
661
Tumor
N/A
662
Normal
N/A
421
Tumor
N/A
663
Tumor
N/A
422
Normal
N/A
664
Normal
N/A
785
Tumor
N/A
423
Tumor
N/A
665
Tumor
N/A
786
Normal
N/A
424
Normal
N/A
545
Tumor
N/A
666
Normal
N/A
425
Tumor
N/A
546
Normal
N/A
426
Normal
N/A
427
Tumor
N/A
428
Normal
N/A
671
Tumor
N/A
672
Normal
N/A
431
Tumor
N/A
311
Tumor
N/A
432
Normal
N/A
553
Tumor
N/A
312
Normal
N/A
433
Tumor
N/A
554
Normal
N/A
313
Tumor
N/A
434
Normal
N/A
314
Normal
N/A
435
Tumor
N/A
436
Normal
N/A
557
Tumor
N/A
558
Normal
N/A
563
Tumor
N/A
443
Tumor
N/A
564
Normal
N/A
685
Tumor
N/A
444
Normal
N/A
686
Normal
N/A
445
Tumor
N/A
446
Normal
N/A
567
Tumor
N/A
447
Tumor
N/A
568
Normal
N/A
327
Tumor
N/A
448
Normal
N/A
328
Normal
N/A
571
Tumor
N/A
451
Tumor
N/A
572
Normal
N/A
331
Tumor
N/A
452
Normal
N/A
573
Tumor
N/A
211
Tumor
N/A
332
Normal
N/A
574
Normal
N/A
695
Tumor
N/A
212
Normal
N/A
696
Normal
N/A
213
Tumor
N/A
455
Tumor
N/A
697
Tumor
N/A
214
Normal
N/A
456
Normal
N/A
698
Normal
N/A
217
Tumor
N/A
218
Normal
N/A
461
Tumor
N/A
341
Tumor
N/A
462
Normal
N/A
221
Tumor
N/A
342
Normal
N/A
463
Tumor
N/A
222
Normal
N/A
343
Tumor
N/A
464
Normal
N/A
223
Tumor
N/A
344
Normal
N/A
465
Tumor
N/A
224
Normal
N/A
466
Normal
N/A
467
Tumor
N/A
468
Normal
N/A
227
Tumor
N/A
228
Normal
N/A
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.