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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE2J1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
11.3
Number of samples
362
Samples
Sample
Description
TPM
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
38.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
34.8
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
33.6
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
28.5
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
28.2
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
27.2
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
26.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
25.8
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
24.2
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
24.0
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
23.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
23.7
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
23.5
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
23.4
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
23.2
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
22.6
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
22.5
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
22.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
22.0
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
21.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
21.5
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
21.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
21.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
21.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
20.7
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
20.4
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
19.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
19.4
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
19.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
19.1
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
19.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
19.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
18.7
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
18.6
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
18.5
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
18.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
18.3
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
17.9
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
17.8
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
17.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
17.7
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
17.7
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
17.6
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
17.5
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
17.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
17.1
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
17.1
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
17.0
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
16.9
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
16.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
16.8
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
16.7
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
16.7
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
16.4
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
16.4
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
16.2
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
16.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
16.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
16.1
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
16.1
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
15.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
15.8
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
15.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
15.6
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
15.5
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
15.5
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
15.4
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
15.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
15.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
15.2
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
15.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
15.2
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
15.0
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
14.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
14.9
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
14.9
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
14.8
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
14.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.8
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
14.7
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
14.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
14.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
14.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
14.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
14.6
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
14.5
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
14.5
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
14.4
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
14.4
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
14.3
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
14.2
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
14.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
14.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
14.1
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
14.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
14.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
14.0
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
13.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
13.8
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
13.8
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
13.7
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
13.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
13.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
13.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
13.7
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
13.6
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
13.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
13.6
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
13.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
13.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
13.5
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
13.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
13.4
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
13.4
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
13.4
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
13.4
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
13.4
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
13.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
13.3
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
13.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
13.1
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
13.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
12.8
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
12.8
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
12.7
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
12.7
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
12.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
12.6
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
12.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
12.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
12.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
12.4
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
12.4
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
12.3
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
12.2
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
12.1
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
12.1
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
12.1
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
12.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
12.0
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
11.9
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
11.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
11.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
11.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.7
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
11.7
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
11.6
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
11.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
11.6
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
11.6
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
11.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
11.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
11.5
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
11.4
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
11.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
11.3
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
11.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
11.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
11.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
11.1
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
11.0
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
11.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
10.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
10.9
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
10.9
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
10.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
10.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.8
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
10.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
10.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
10.7
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
10.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
10.6
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.6
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
10.5
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
10.3
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
10.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
10.3
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
10.3
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
10.3
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
10.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
10.2
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
10.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
10.2
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
10.2
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
10.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
10.2
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
10.2
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
10.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
9.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
9.8
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
9.8
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
9.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
9.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
9.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
9.6
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.6
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
9.6
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
9.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
9.4
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
9.4
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.4
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
9.4
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
9.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
9.3
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
9.3
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
9.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
9.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
9.2
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
9.2
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
9.2
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
9.1
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
9.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
9.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
9.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
9.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
8.9
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
8.9
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
8.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
8.8
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.7
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
8.6
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
8.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
8.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
8.5
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
8.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
8.4
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
8.4
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
8.4
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
8.4
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
8.3
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
8.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
8.3
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
8.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
8.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
8.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
8.2
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
8.1
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
8.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
8.0
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
8.0
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
8.0
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
7.9
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
7.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
7.8
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
7.8
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
7.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
7.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
7.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
7.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
7.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
7.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
7.5
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
7.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.5
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
7.5
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
7.5
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
7.4
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
7.3
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
7.3
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
7.3
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
7.3
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
7.3
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
7.2
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.2
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
7.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
7.1
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
7.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
7.1
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
7.1
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
7.0
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
7.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
7.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
7.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
7.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
6.9
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
6.9
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
6.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
6.8
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
6.8
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
6.7
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
6.7
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.7
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
6.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
6.7
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
6.6
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
6.5
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
6.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.5
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
6.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
6.4
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
6.4
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
6.3
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
6.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
6.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
6.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
6.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
6.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
6.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
6.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
6.0
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.9
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
5.9
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
5.9
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
5.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
5.9
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
5.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.8
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
5.6
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
5.6
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.4
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
5.4
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
5.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
5.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
5.3
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
5.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
5.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
5.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
5.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
5.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
5.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
4.9
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.9
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
4.8
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
4.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
4.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.7
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.7
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
4.5
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.5
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
4.5
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
4.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
4.3
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
4.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
4.1
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
4.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
3.9
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
3.4
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.4
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
3.3
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
3.3
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.2
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
3.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.9
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
2.8
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
2.5
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
2.2
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
2.0
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
UBE2J1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
14.1
Number of samples
231
Samples
Sample
Description
TPM
DO48728
0 years, female, NA, stage:2, alive, 150 days
41.8
DO23523
0 years, male, NA, stage:3, alive, 1080 days
37.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
35.3
DO45237
0 years, male, NA, stage:2, alive, 900 days
34.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
33.9
DO45117
0 years, female, NA, stage:2, dead, 1110 days
32.2
DO23530
0 years, male, NA, stage:4, dead, 180 days
31.4
DO45203
0 years, female, NA, stage:2, alive, 1170 days
30.2
DO45287
0 years, male, NA, stage:1, alive, 390 days
29.0
DO23513
0 years, male, NA, stage:3, alive, 1200 days
28.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
27.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
25.5
DO23514
0 years, male, NA, stage:2, alive, 1290 days
25.4
DO23547
0 years, male, NA, stage:1, alive, 1020 days
24.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
23.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
23.6
DO23549
0 years, male, NA, stage:3, alive, 990 days
23.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
22.7
DO48681
0 years, male, NA, stage:2, alive, 900 days
22.6
DO45179
0 years, female, NA, stage:2, alive, 600 days
22.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
21.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
21.9
DO45185
0 years, male, NA, stage:2, alive, 600 days
21.8
DO45299
0 years, female, NA, stage:1, alive, 1440 days
21.6
DO45219
0 years, male, NA, stage:2, alive, 1080 days
21.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
21.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
21.0
DO45131
0 years, male, NA, stage:4, dead, 360 days
20.4
DO45209
0 years, male, NA, stage:4, alive, 1350 days
20.4
DO50819
0 years, female, NA, stage:2, alive, 510 days
20.2
DO50829
0 years, male, NA, stage:3, alive, 570 days
20.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
20.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
19.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
19.3
DO45157
0 years, male, NA, stage:2, alive, 1980 days
19.3
DO45225
0 years, male, NA, stage:1, alive, 1050 days
19.2
DO45275
0 years, male, NA, stage:3, dead, 10 days
19.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
18.9
DO45137
0 years, male, NA, stage:1, alive, 1320 days
18.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
18.7
DO48717
0 years, male, NA, stage:4, dead, 180 days
18.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
18.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
18.5
DO45239
0 years, male, NA, stage:2, alive, 870 days
18.4
DO50800
0 years, male, NA, stage:2, alive, 510 days
18.1
DO45091
0 years, male, NA, stage:2, dead, 1320 days
18.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
17.7
DO45165
0 years, male, NA, stage:2, alive, 690 days
17.6
DO45231
0 years, male, NA, stage:2, alive, 930 days
17.5
DO50815
0 years, male, NA, stage:3, alive, 150 days
17.5
DO45277
0 years, male, NA, stage:3, alive, 600 days
17.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
17.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
17.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
17.0
DO23521
0 years, male, NA, stage:3, alive, 1110 days
17.0
DO45193
0 years, female, NA, stage:4, dead, 120 days
16.9
DO23510
0 years, female, NA, stage:2, alive, 870 days
16.9
DO45243
0 years, female, NA, stage:3, alive, 930 days
16.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
16.8
DO45103
0 years, male, NA, stage:3, alive, 450 days
16.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
16.5
DO45149
0 years, female, NA, stage:2, alive, 1260 days
16.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
15.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
15.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
15.9
DO45227
0 years, female, NA, stage:2, alive, 1020 days
15.9
DO23541
0 years, male, NA, stage:2, alive, 930 days
15.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
15.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
15.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
15.5
DO48725
0 years, male, NA, stage:1, alive, 780 days
15.4
DO45129
0 years, male, NA, stage:3, alive, 1470 days
15.3
DO50840
0 years, male, NA, stage:2, alive, 330 days
15.3
DO23535
0 years, male, NA, stage:1, alive, 960 days
15.3
DO45119
0 years, male, NA, stage:3, dead, 510 days
15.1
DO45261
0 years, male, NA, stage:3, alive, 990 days
15.1
DO45255
0 years, male, NA, stage:3, alive, 720 days
15.1
DO48743
0 years, female, NA, stage:2, alive, 570 days
15.0
DO23526
0 years, male, NA, stage:3, alive, 1050 days
15.0
DO23551
0 years, male, NA, stage:3, dead, 150 days
15.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
14.8
DO48695
0 years, male, NA, stage:2, alive, 720 days
14.8
DO23542
0 years, male, NA, stage:3, alive, 960 days
14.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
14.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
14.5
DO45259
0 years, male, NA, stage:3, alive, 330 days
14.5
DO45297
0 years, female, NA, stage:4, dead, 1260 days
14.5
DO50791
0 years, female, NA, stage:1, dead, 480 days
14.5
DO50803
0 years, female, NA, stage:1, alive, 540 days
14.4
DO45099
0 years, male, NA, stage:3, alive, 1590 days
14.3
DO48700
0 years, female, NA, stage:2, alive, 810 days
14.3
DO45133
0 years, male, NA, stage:3, dead, 660 days
14.2
DO45153
0 years, female, NA, stage:2, alive, 1380 days
14.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
14.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
14.0
DO23538
0 years, male, NA, stage:2, alive, 450 days
13.9
DO23518
0 years, male, NA, stage:2, alive, 1320 days
13.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
13.9
DO48712
0 years, male, NA, stage:2, alive, 810 days
13.8
DO23550
0 years, male, NA, stage:1, alive, 990 days
13.8
DO48742
0 years, male, NA, stage:2, alive, 600 days
13.7
DO50850
0 years, male, NA, stage:3, alive, 720 days
13.7
DO48719
0 years, male, NA, stage:2, alive, 690 days
13.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
13.6
DO50793
0 years, male, NA, stage:4, alive, 540 days
13.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
13.6
DO45125
0 years, male, NA, stage:3, alive, 1680 days
13.6
DO45305
0 years, male, NA, stage:4, alive, 300 days
13.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
13.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
13.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
13.3
DO50844
0 years, male, NA, stage:4, alive, 300 days
13.3
DO48736
0 years, female, NA, stage:1, alive, 600 days
13.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
13.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
13.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
13.2
DO50799
0 years, female, NA, stage:2, alive, 540 days
13.2
DO48741
0 years, male, NA, stage:3, alive, 240 days
13.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
13.1
DO23536
0 years, male, NA, stage:2, alive, 930 days
13.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
13.1
DO48682
0 years, female, NA, stage:3, dead, 120 days
13.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
13.1
DO48733
0 years, male, NA, stage:2, alive, 600 days
13.0
DO23519
0 years, male, NA, stage:3, alive, 630 days
12.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
12.9
DO45127
0 years, male, NA, stage:3, dead, 420 days
12.9
DO23537
0 years, male, NA, stage:2, dead, 900 days
12.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
12.8
DO50820
0 years, female, NA, stage:3, alive, 510 days
12.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
12.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
12.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
12.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
12.5
DO50859
0 years, male, NA, stage:2, alive, 180 days
12.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
12.4
DO45173
0 years, male, NA, stage:3, alive, 1170 days
12.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
12.3
DO45181
0 years, female, NA, stage:2, alive, 1200 days
12.3
DO45289
0 years, female, NA, stage:3, alive, 360 days
12.3
DO45279
0 years, male, NA, stage:3, alive, 1290 days
12.3
DO23543
0 years, male, NA, stage:2, alive, 1020 days
12.2
DO45189
0 years, female, NA, stage:2, alive, 1200 days
12.1
DO23528
0 years, female, NA, stage:2, alive, 1020 days
12.1
DO50806
0 years, male, NA, stage:4, alive, 540 days
12.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
12.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
11.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
11.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
11.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
11.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
11.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
11.6
DO50813
0 years, male, NA, stage:2, alive, 420 days
11.5
DO45307
0 years, female, NA, stage:4, dead, 240 days
11.5
DO23525
0 years, male, NA, stage:4, alive, 1050 days
11.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
11.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
11.0
DO45201
0 years, male, NA, stage:1, alive, 900 days
10.9
DO48751
0 years, male, NA, stage:2, dead, 480 days
10.9
DO50818
0 years, male, NA, stage:2, alive, 510 days
10.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
10.8
DO45105
0 years, male, NA, stage:1, alive, 1680 days
10.8
DO45161
0 years, male, NA, stage:2, dead, 540 days
10.7
DO45217
0 years, female, NA, stage:3, dead, 270 days
10.7
DO48761
0 years, male, NA, stage:2, alive, 870 days
10.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
10.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
10.5
DO48679
0 years, male, NA, stage:2, alive, 1200 days
10.5
DO45111
0 years, male, NA, stage:2, alive, 1590 days
10.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
10.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
10.3
DO48730
0 years, female, NA, stage:2, alive, 630 days
10.3
DO50808
0 years, male, NA, stage:2, alive, 570 days
10.0
DO50804
0 years, male, NA, stage:2, alive, 720 days
10.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
10.0
DO45195
0 years, male, NA, stage:1, alive, 390 days
9.9
DO45215
0 years, male, NA, stage:2, alive, 1170 days
9.9
DO48672
0 years, male, NA, stage:2, alive, 450 days
9.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
9.9
DO45143
0 years, male, NA, stage:3, alive, 1290 days
9.7
DO45245
0 years, female, NA, stage:2, dead, 240 days
9.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
9.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
9.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
9.5
DO45197
0 years, male, NA, stage:2, alive, 1170 days
9.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
9.2
DO48693
0 years, male, NA, stage:2, alive, 900 days
9.1
DO23512
0 years, male, NA, stage:1, alive, 1260 days
9.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
9.0
DO23511
0 years, female, NA, stage:3, dead, 180 days
8.9
DO45187
0 years, female, NA, stage:1, alive, 1260 days
8.8
DO45094
0 years, male, NA, stage:3, alive, 1650 days
8.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
8.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
8.6
DO45265
0 years, male, NA, stage:3, alive, 1020 days
8.6
DO50776
0 years, male, NA, stage:1, alive, 690 days
8.6
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
8.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
8.5
DO45285
0 years, male, NA, stage:3, alive, 480 days
8.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
8.2
DO45191
0 years, female, NA, stage:2, alive, 1200 days
8.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
8.2
DO45113
0 years, male, NA, stage:3, alive, 1560 days
8.2
DO45101
0 years, male, NA, stage:2, alive, 1680 days
8.1
DO45257
0 years, male, NA, stage:3, alive, 810 days
8.1
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.9
DO50832
0 years, male, NA, stage:3, alive, 90 days
7.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
7.8
DO45097
0 years, male, NA, stage:3, alive, 1620 days
7.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
7.5
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.1
DO48723
0 years, male, NA, stage:1, alive, 600 days
7.1
DO23516
0 years, male, NA, stage:3, dead, 20 days
6.6
DO23540
0 years, male, NA, stage:1, alive, 750 days
6.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
6.5
DO23532
0 years, female, NA, stage:1, alive, 960 days
6.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
6.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.0
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.0
DO50783
0 years, male, NA, stage:3, alive, 480 days
5.8
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.8
DO50811
0 years, male, NA, stage:1, alive, 450 days
5.7
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
5.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
4.5
DO48677
0 years, male, NA, stage:3, alive, 1140 days
4.5
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.3
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2.9
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
211
Tumor
1.4
724
Normal
1.3
451
Tumor
1.0
917
Tumor
1.0
473
Tumor
1.0
535
Tumor
0.9
385
Tumor
0.9
923
Tumor
0.7
536
Normal
0.7
661
Tumor
0.7
1041
Tumor
0.7
1031
Tumor
0.6
977
Tumor
0.6
383
Tumor
0.6
963
Tumor
0.6
966
Normal
0.6
227
Tumor
0.6
431
Tumor
0.5
937
Tumor
0.5
387
Tumor
0.5
217
Tumor
0.5
443
Tumor
0.5
697
Tumor
0.5
514
Normal
0.4
1025
Tumor
0.4
271
Tumor
0.4
524
Normal
0.4
686
Normal
0.4
221
Tumor
0.4
492
Normal
0.4
663
Tumor
0.4
721
Tumor
0.4
983
Tumor
0.4
353
Tumor
0.4
616
Normal
0.4
477
Tumor
0.4
823
Tumor
0.4
918
Normal
0.4
777
Tumor
0.4
411
Tumor
0.3
926
Normal
0.3
435
Tumor
0.3
223
Tumor
0.3
648
Normal
0.3
737
Tumor
0.3
913
Tumor
0.3
1042
Normal
0.3
852
Normal
0.3
527
Tumor
0.3
123
Tumor
0.3
267
Tumor
0.3
171
Tumor
0.3
978
Normal
0.3
327
Tumor
0.3
814
Normal
0.3
343
Tumor
0.3
331
Tumor
0.3
1026
Normal
0.3
213
Tumor
0.3
212
Normal
0.3
452
Normal
0.3
873
Tumor
0.3
861
Tumor
0.3
716
Normal
0.3
497
Tumor
0.3
445
Tumor
0.3
1032
Normal
0.3
366
Normal
0.3
695
Tumor
0.3
713
Tumor
0.3
447
Tumor
0.3
1015
Tumor
0.3
956
Normal
0.3
434
Normal
0.3
641
Tumor
0.3
628
Normal
0.3
277
Tumor
0.3
741
Tumor
0.2
285
Tumor
0.2
448
Normal
0.2
965
Tumor
0.2
464
Normal
0.2
868
Normal
0.2
533
Tumor
0.2
311
Tumor
0.2
268
Normal
0.2
967
Tumor
0.2
662
Normal
0.2
185
Tumor
0.2
951
Tumor
0.2
138
Normal
0.2
816
Normal
0.2
365
Tumor
0.2
355
Tumor
0.2
882
Normal
0.2
412
Normal
0.2
696
Normal
0.2
957
Tumor
0.2
665
Tumor
0.2
573
Tumor
0.2
824
Normal
0.2
261
Tumor
0.2
384
Normal
0.2
468
Normal
0.2
922
Normal
0.2
367
Tumor
0.2
666
Normal
0.2
146
Normal
0.2
571
Tumor
0.2
815
Tumor
0.2
494
Normal
0.2
915
Tumor
0.2
1028
Normal
0.2
958
Normal
0.1
968
Normal
0.1
415
Tumor
0.1
664
Normal
0.1
478
Normal
0.1
218
Normal
0.1
1016
Normal
0.1
1043
Tumor
0.1
728
Normal
0.1
553
Tumor
0.1
368
Normal
0.1
722
Normal
0.1
615
Tumor
0.1
192
Normal
0.1
1044
Normal
0.1
916
Normal
0.1
1046
Normal
0.1
817
Tumor
0.1
518
Normal
0.1
112
Tumor
0.1
284
Normal
0.1
1022
Normal
0.1
642
Normal
0.1
912
Normal
0.1
516
Normal
0.1
925
Tumor
0.1
863
Tumor
0.1
723
Tumor
0.1
446
Normal
0.1
546
Normal
0.1
357
Tumor
0.1
462
Normal
0.1
141
Tumor
0.1
714
Normal
0.1
188
Normal
0.1
984
Normal
0.1
526
Normal
0.1
738
Normal
0.1
554
Normal
0.1
313
Tumor
0.1
881
Tumor
0.1
491
Tumor
0.1
488
Normal
0.1
964
Normal
0.1
482
Normal
0.1
534
Normal
0.1
921
Tumor
0.1
147
Tumor
0.1
456
Normal
0.1
698
Normal
0.1
187
Tumor
0.1
867
Tumor
0.1
938
Normal
0.1
137
Tumor
0.1
866
Normal
0.1
286
Normal
0.1
943
Tumor
0.1
356
Normal
0.1
647
Tumor
0.1
857
Tumor
0.0
436
Normal
0.0
574
Normal
0.0
858
Normal
0.0
484
Normal
0.0
461
Tumor
0.0
525
Tumor
0.0
878
Normal
0.0
955
Tumor
0.0
498
Normal
0.0
818
Normal
0.0
884
Normal
0.0
756
Normal
0.0
362
Normal
0.0
564
Normal
0.0
914
Normal
0.0
742
Normal
0.0
283
Tumor
0.0
432
Normal
0.0
386
Normal
0.0
515
Tumor
0.0
487
Tumor
0.0
672
Normal
0.0
813
Tumor
0.0
131
Tumor
0.0
224
Normal
0.0
975
Tumor
0.0
126
Normal
0.0
262
Normal
0.0
1021
Tumor
0.0
851
Tumor
0.0
864
Normal
0.0
376
Normal
0.0
463
Tumor
0.0
778
Normal
0.0
341
Tumor
0.0
142
Normal
0.0
413
Tumor
0.0
786
Normal
0.0
976
Normal
0.0
1045
Tumor
0.0
483
Tumor
0.0
1014
Normal
0.0
191
Tumor
0.0
196
Normal
0.0
472
Normal
0.0
258
Normal
0.0
444
Normal
-0.1
127
Tumor
-0.1
538
Normal
-0.1
1013
Tumor
-0.1
298
Normal
-0.1
924
Normal
-0.1
474
Normal
-0.1
232
Normal
-0.1
636
Normal
-0.1
433
Tumor
-0.1
148
Normal
-0.1
685
Tumor
-0.1
874
Normal
-0.1
361
Tumor
-0.1
883
Tumor
-0.1
568
Normal
-0.1
231
Tumor
-0.1
272
Normal
-0.1
328
Normal
-0.1
862
Normal
-0.1
1027
Tumor
-0.1
416
Normal
-0.1
426
Normal
-0.1
466
Normal
-0.1
312
Normal
-0.1
954
Normal
-0.1
228
Normal
-0.1
135
Tumor
-0.1
364
Normal
-0.1
745
Tumor
-0.1
428
Normal
-0.1
981
Tumor
-0.1
465
Tumor
-0.1
537
Tumor
-0.1
132
Normal
-0.1
396
Normal
-0.1
572
Normal
-0.1
314
Normal
-0.1
944
Normal
-0.1
125
Tumor
-0.1
513
Tumor
-0.1
952
Normal
-0.1
278
Normal
-0.2
214
Normal
-0.2
388
Normal
-0.2
627
Tumor
-0.2
422
Normal
-0.2
746
Normal
-0.2
982
Normal
-0.2
222
Normal
-0.2
528
Normal
-0.2
145
Tumor
-0.2
865
Tumor
-0.2
455
Tumor
-0.2
755
Tumor
-0.2
391
Tumor
-0.2
427
Tumor
-0.2
111
Normal
-0.2
423
Tumor
-0.2
297
Tumor
-0.2
375
Tumor
-0.2
352
Normal
-0.2
162
Normal
-0.2
392
Normal
-0.2
414
Normal
-0.2
332
Normal
-0.2
471
Tumor
-0.2
953
Tumor
-0.2
558
Normal
-0.2
172
Normal
-0.3
618
Normal
-0.3
358
Normal
-0.3
493
Tumor
-0.3
567
Tumor
-0.3
421
Tumor
-0.3
743
Tumor
-0.3
186
Normal
-0.3
351
Tumor
-0.3
114
Normal
-0.3
563
Tumor
-0.3
467
Tumor
-0.3
136
Normal
-0.3
785
Tumor
-0.3
124
Normal
-0.3
128
Normal
-0.3
195
Tumor
-0.4
911
Tumor
-0.4
557
Tumor
-0.4
257
Tumor
-0.4
394
Normal
-0.4
744
Normal
-0.4
671
Tumor
-0.4
424
Normal
-0.4
727
Tumor
-0.4
635
Tumor
-0.4
354
Normal
-0.4
481
Tumor
-0.4
344
Normal
-0.5
617
Tumor
-0.5
363
Tumor
-0.5
545
Tumor
-0.5
342
Normal
-0.5
161
Tumor
-0.5
523
Tumor
-0.6
395
Tumor
-0.6
425
Tumor
-0.6
393
Tumor
-0.6
113
Tumor
-0.6
517
Tumor
-0.7
715
Tumor
-0.7
877
Tumor
-0.8
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
