HIPPOCAMPAL FORMATION - Expression summary
Protein expressioni No data
RNA expressioni
Consensus:16.9 nTPM
HPA Brain:73.4 nTPM
GTEx:16.9 nTPM
FANTOM5:73.8 Scaled Tags Per Million
Pig:43.6 nTPM
Mouse:36.3 nTPM
Allen mouse:0.8 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 73.4
Sample id Sample description nTPM
Hippocampus
nTPM: 71.0
2621 Female, age 67, right hemisphere 77.2
1911 Female, age 85, right hemisphere 72.0
1855 Male, age 76, left hemisphere 71.5
1898 Male, age 80, left hemisphere 69.7
2148 Female, age 91, left hemisphere 68.0
2529 Female, age 94, left hemisphere 67.6
Dentate gyrus
nTPM: 70.1
2246 Female, age 85, both hemispheres 78.8
2010 Male, age 76, both hemispheres 73.8
1927 Female, age 91, both hemispheres 71.6
2531 Female, age 67, both hemispheres 68.9
2528 Male, age 74, both hemispheres 64.3
2530 Female, age 94, left hemisphere 63.4
Entorhinal gyrus
nTPM: 62.4
1938 Female, age 85, left hemisphere 66.2
2764 Male, age 80, right hemisphere 65.0
2613 Female, age 94, left hemisphere 63.0
1787 Male, age 76, left hemisphere 62.8
2117 Female, age 91, right hemisphere 58.9
2686 Male, age 75, right hemisphere 58.3
Hippocampus, CA1
nTPM: 72.9
2749 Male, age 80, left hemisphere 82.1
2045 Male, age 76, both hemispheres 80.6
1873 Female, age 85, both hemispheres 76.5
2527 Male, age 74, both hemispheres 65.3
2082 Female, age 91, right hemisphere 60.0
Hippocampus, CA2
nTPM: 64.9
1892 Male, age 76, both hemispheres 74.5
1963 Male, age 80, left hemisphere 66.0
2249 Male, age 74, both hemispheres 64.3
1940 Female, age 85, left hemisphere 62.6
2113 Female, age 91, right hemisphere 62.6
2437 Female, age 94, left hemisphere 59.7
Hippocampus, CA3
nTPM: 73.4
2137 Male, age 80, left hemisphere 84.8
2620 Female, age 94, left hemisphere 76.8
1891 Female, age 85, both hemispheres 71.8
2861 Female, age 67, both hemispheres 71.1
2436 Male, age 74, both hemispheres 70.5
1867 Male, age 76, both hemispheres 65.5
Parahippocampal cortex
nTPM: 66.8
2018 Male, age 76, both hemispheres 73.9
2532 Female, age 72, left hemisphere 72.3
1850 Male, age 80, both hemispheres 72.2
2245 Female, age 91, both hemispheres 69.9
1933 Female, age 85, both hemispheres 68.8
2250 Female, age 67, right hemisphere 64.8
1990 Female, age 91, right hemisphere 64.2
2693 Female, age 94, both hemispheres 63.7
2692 Male, age 74, both hemispheres 59.4
2622 Female, age 67, right hemisphere 58.9
Perirhinal gyrus
nTPM: 69.5
1841 Female, age 85, right hemisphere 74.0
1794 Male, age 80, right hemisphere 72.1
2848 Male, age 76, right hemisphere 69.7
1847 Female, age 91, left hemisphere 67.0
2521 Female, age 94, right hemisphere 64.5
Subiculum
nTPM: 67.6
2438 Female, age 94, left hemisphere 76.1
1901 Male, age 80, both hemispheres 69.3
2042 Male, age 76, both hemispheres 68.9
1977 Female, age 85, both hemispheres 68.7
2619 Male, age 74, both hemispheres 62.5
2729 Female, age 91, right hemisphere 59.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 16.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.9
Samples: 197

Max nTPM: 28.7
Min nTPM: 10.0
Std nTPM: 3.5
Median nTPM: 16.3
GTEX-14C5O-0011-R1b-SM-6AJBW 60-69 years, male 28.7
GTEX-131XH-0011-R1a-SM-5DUWA 50-59 years, male 28.6
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 27.6
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 27.2
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 26.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 24.2
GTEX-1B996-0011-R1b-SM-7P8PO 60-69 years, male 24.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 23.2
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 23.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 23.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 22.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 73.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 73.8
FF:10169-103B7 60 years, female 74.7
FF:10153-102I9 76 years, female 73.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 43.6
Pig sample Sample description nTPM
Subiculum
nTPM: 41.4
Samples: 4

Max nTPM: 46.8
Min nTPM: 38.4
Sample A Female 46.8
Sample B Female 38.6
Sample C Male 41.7
Sample D Male 38.4
Dorsal hippocampus
nTPM: 43.6
Samples: 4

Max nTPM: 47.5
Min nTPM: 37.6
Sample A Female 47.5
Sample B Female 46.5
Sample C Male 37.6
Sample D Male 42.7
Entorhinal cortex
nTPM: 41.3
Samples: 4

Max nTPM: 46.3
Min nTPM: 37.7
Sample A Female 46.3
Sample B Female 37.7
Sample C Male 40.7
Sample D Male 40.5
Ventral hippocampus
nTPM: 42.8
Samples: 4

Max nTPM: 48.5
Min nTPM: 37.4
Sample A Female 40.9
Sample B Female 37.4
Sample C Male 44.3
Sample D Male 48.5

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 36.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 36.3
Samples: 4

Max nTPM: 42.0
Min nTPM: 31.7
Sample A Male 31.7
Sample B Male 36.2
Sample C Female 35.4
Sample D Female 42.0
Hippocampal formation
nTPM: 34.7
Samples: 4

Max nTPM: 38.7
Min nTPM: 32.0
Sample A Male 32.0
Sample B Male 38.7
Sample C Female 36.0
Sample D Female 32.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.8
68798181 Antisense, RP_050215_01_H10, Mouse strain C57BL/6J (56 days, male) 0.8

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