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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MTOR is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
74.4
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
70.4
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
47.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
35.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
33.1
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
32.7
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
32.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
31.0
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
29.3
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
27.5
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
26.2
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
25.6
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
25.4
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
25.2
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
25.2
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
25.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
24.9
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
24.7
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
24.7
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
24.1
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
23.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
23.3
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
23.1
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
23.0
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
22.8
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
22.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
22.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
22.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
22.1
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
22.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
20.9
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
20.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
20.8
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
20.7
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
20.6
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
20.4
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
20.4
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
20.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
20.2
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
20.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
20.1
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
19.8
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
19.6
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
19.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
19.6
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
19.5
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
19.3
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
19.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
19.1
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
18.9
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
18.9
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
18.8
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
18.7
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
18.7
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
18.6
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
18.5
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
18.4
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
18.4
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
18.2
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
18.2
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
18.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
18.0
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
18.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
18.0
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
17.9
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
17.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
17.7
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
17.7
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
17.6
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
17.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
17.4
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
17.4
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
17.4
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
17.3
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
17.3
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
17.2
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
17.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
17.2
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
17.0
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
17.0
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
17.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
16.9
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
16.9
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
16.8
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
16.7
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
16.7
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
16.6
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
16.6
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
16.4
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
16.3
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
16.2
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
16.0
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
15.9
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
15.8
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
15.7
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
15.7
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
15.6
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
15.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
15.6
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
15.5
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
15.5
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
15.4
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
15.0
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
15.0
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
15.0
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
14.9
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
14.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
14.7
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
14.7
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
14.7
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
14.6
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
14.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
14.3
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
14.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
14.3
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
14.2
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
14.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
14.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
14.1
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
14.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
14.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
13.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
13.9
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
13.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
13.7
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
13.6
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
13.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
13.4
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
13.4
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
13.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
13.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
13.3
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
13.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
13.1
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
13.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
13.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
13.0
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
13.0
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
12.9
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
12.9
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
12.9
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
12.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
12.6
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
12.6
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
12.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
12.5
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
12.5
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
12.4
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
12.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.4
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
12.4
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
12.3
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
12.3
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
12.3
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
12.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
12.3
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
12.2
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
12.2
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
12.1
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
12.1
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
12.0
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
11.9
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
11.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
11.7
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
11.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
11.6
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
11.6
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
11.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
11.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
11.6
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
11.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
11.5
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
11.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
11.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
11.2
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
11.2
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
11.1
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
11.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
11.1
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
11.0
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
11.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
11.0
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
11.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
11.0
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
10.9
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
10.9
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
10.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
10.8
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
10.8
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
10.7
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
10.7
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.7
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
10.7
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
10.7
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
10.7
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
10.6
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
10.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
10.5
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
10.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
10.5
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
10.4
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
10.4
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.3
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
10.3
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.2
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
10.2
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
10.2
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
10.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
10.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
10.1
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
10.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
10.1
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
10.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9.9
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
9.9
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
9.9
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
9.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.8
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
9.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.8
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
9.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
9.7
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
9.7
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
9.6
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
9.6
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
9.6
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
9.6
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
9.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.4
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
9.3
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9.3
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
9.2
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
9.2
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
9.1
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
9.1
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
9.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
9.1
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
9.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
8.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
8.9
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
8.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.8
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
8.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
8.7
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
8.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
8.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
8.6
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
8.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
8.5
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
8.5
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
8.5
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
8.5
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
8.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.5
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
8.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
8.4
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
8.3
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
8.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
8.3
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
8.3
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
8.2
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
8.2
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
8.2
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
8.1
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
8.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
8.1
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
8.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
8.1
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
8.0
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
7.9
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
7.9
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
7.9
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
7.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
7.8
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
7.8
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
7.8
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
7.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
7.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
7.5
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
7.4
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.4
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
7.4
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
7.3
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
7.3
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
7.2
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
7.2
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
7.2
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
7.2
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
7.1
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
7.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
7.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
7.0
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
6.9
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
6.9
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
6.9
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
6.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
6.5
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
6.5
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.5
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
6.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
6.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
6.3
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
6.3
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
6.2
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
6.2
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
6.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
6.1
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
6.1
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.0
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
5.9
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
5.9
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
5.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
5.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.8
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
5.7
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
5.7
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
5.6
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
5.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
5.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
5.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
5.4
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
5.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
5.3
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.2
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
5.1
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
5.0
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
5.0
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
4.8
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.6
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.6
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
4.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
4.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
4.4
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
4.3
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.3
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
4.3
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
4.3
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.3
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.2
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
4.2
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
4.1
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.8
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
3.7
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
3.6
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.3
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
3.2
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
3.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.8
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
2.8
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
2.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.6
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.6
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
2.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
2.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
1.8
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.8
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
MTOR is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.8
Number of samples
231
Samples
Sample
Description
TPM
DO45209
0 years, male, NA, stage:4, alive, 1350 days
61.8
DO45227
0 years, female, NA, stage:2, alive, 1020 days
25.9
DO45219
0 years, male, NA, stage:2, alive, 1080 days
24.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
24.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
22.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
19.0
DO45096
0 years, male, NA, stage:2, dead, 1290 days
16.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
16.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
16.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
16.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
16.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
15.9
DO45139
0 years, male, NA, stage:3, alive, 1320 days
15.6
DO50818
0 years, male, NA, stage:2, alive, 510 days
15.0
DO45099
0 years, male, NA, stage:3, alive, 1590 days
14.4
DO48732
0 years, male, NA, stage:3, alive, 630 days
14.4
DO45229
0 years, male, NA, stage:1, alive, 990 days
14.3
DO45173
0 years, male, NA, stage:3, alive, 1170 days
14.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
14.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
14.1
DO45207
0 years, male, NA, stage:1, alive, 1050 days
14.0
DO45119
0 years, male, NA, stage:3, dead, 510 days
14.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
13.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
13.7
DO23527
0 years, male, NA, stage:1, alive, 1050 days
13.4
DO23513
0 years, male, NA, stage:3, alive, 1200 days
13.4
DO45205
0 years, female, NA, stage:2, dead, 90 days
13.0
DO45149
0 years, female, NA, stage:2, alive, 1260 days
13.0
DO50778
0 years, male, NA, stage:4, alive, 630 days
12.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
12.8
DO45117
0 years, female, NA, stage:2, dead, 1110 days
12.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
12.7
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.5
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.5
DO50845
0 years, male, NA, stage:3, alive, 210 days
12.5
DO50799
0 years, female, NA, stage:2, alive, 540 days
12.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.3
DO45221
0 years, female, NA, stage:4, dead, 390 days
12.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
12.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
12.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
12.1
DO48741
0 years, male, NA, stage:3, alive, 240 days
12.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
11.9
DO50809
0 years, male, NA, stage:3, dead, 720 days
11.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
11.8
DO50804
0 years, male, NA, stage:2, alive, 720 days
11.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
11.7
DO23508
0 years, female, NA, stage:2, alive, 390 days
11.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
11.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
11.6
DO45197
0 years, male, NA, stage:2, alive, 1170 days
11.5
DO45131
0 years, male, NA, stage:4, dead, 360 days
11.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
11.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
11.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
11.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
11.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
11.0
DO45127
0 years, male, NA, stage:3, dead, 420 days
10.9
DO23546
0 years, male, NA, stage:2, alive, 1050 days
10.8
DO23534
0 years, male, NA, stage:2, alive, 840 days
10.8
DO48733
0 years, male, NA, stage:2, alive, 600 days
10.7
DO50787
0 years, male, NA, stage:3, alive, 480 days
10.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
10.5
DO45231
0 years, male, NA, stage:2, alive, 930 days
10.5
DO45177
0 years, female, NA, stage:3, alive, 1260 days
10.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
10.4
DO50844
0 years, male, NA, stage:4, alive, 300 days
10.4
DO45185
0 years, male, NA, stage:2, alive, 600 days
10.4
DO48701
0 years, male, NA, stage:2, alive, 780 days
10.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
10.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
10.1
DO45101
0 years, male, NA, stage:2, alive, 1680 days
10.0
DO50832
0 years, male, NA, stage:3, alive, 90 days
9.9
DO23526
0 years, male, NA, stage:3, alive, 1050 days
9.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
9.7
DO23539
0 years, male, NA, stage:1, alive, 1110 days
9.7
DO23512
0 years, male, NA, stage:1, alive, 1260 days
9.7
DO23519
0 years, male, NA, stage:3, alive, 630 days
9.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
9.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
9.5
DO50829
0 years, male, NA, stage:3, alive, 570 days
9.5
DO45281
0 years, male, NA, stage:4, alive, 750 days
9.5
DO50776
0 years, male, NA, stage:1, alive, 690 days
9.5
DO45092
0 years, male, NA, stage:4, dead, 1200 days
9.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
9.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
9.3
DO45145
0 years, male, NA, stage:3, dead, 60 days
9.2
DO23516
0 years, male, NA, stage:3, dead, 20 days
9.2
DO23533
0 years, male, NA, stage:2, alive, 900 days
9.2
DO50813
0 years, male, NA, stage:2, alive, 420 days
9.2
DO45137
0 years, male, NA, stage:1, alive, 1320 days
9.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
9.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
9.0
DO45249
0 years, male, NA, stage:1, alive, 630 days
8.9
DO50819
0 years, female, NA, stage:2, alive, 510 days
8.9
DO45267
0 years, male, NA, stage:3, dead, 570 days
8.8
DO23547
0 years, male, NA, stage:1, alive, 1020 days
8.6
DO23529
0 years, male, NA, stage:4, alive, 930 days
8.6
DO45211
0 years, male, NA, stage:3, alive, 240 days
8.6
DO48712
0 years, male, NA, stage:2, alive, 810 days
8.5
DO48730
0 years, female, NA, stage:2, alive, 630 days
8.5
DO45263
0 years, male, NA, stage:3, dead, 270 days
8.5
DO48728
0 years, female, NA, stage:2, alive, 150 days
8.5
DO50806
0 years, male, NA, stage:4, alive, 540 days
8.4
DO45245
0 years, female, NA, stage:2, dead, 240 days
8.4
DO23545
0 years, male, NA, stage:2, dead, 570 days
8.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
8.4
DO50816
0 years, male, NA, stage:2, alive, 390 days
8.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.4
DO45095
0 years, male, NA, stage:2, alive, 1620 days
8.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
8.3
DO45121
0 years, male, NA, stage:3, alive, 1530 days
8.2
DO45107
0 years, female, NA, stage:2, alive, 1710 days
8.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
8.1
DO45163
0 years, male, NA, stage:2, alive, 960 days
8.1
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.0
DO45299
0 years, female, NA, stage:1, alive, 1440 days
8.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
8.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
7.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
7.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
7.8
DO48723
0 years, male, NA, stage:1, alive, 600 days
7.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.7
DO48742
0 years, male, NA, stage:2, alive, 600 days
7.6
DO48743
0 years, female, NA, stage:2, alive, 570 days
7.6
DO45105
0 years, male, NA, stage:1, alive, 1680 days
7.6
DO45277
0 years, male, NA, stage:3, alive, 600 days
7.5
DO23535
0 years, male, NA, stage:1, alive, 960 days
7.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
7.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
7.5
DO45179
0 years, female, NA, stage:2, alive, 600 days
7.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
7.4
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.4
DO48759
0 years, male, NA, stage:3, alive, 720 days
7.4
DO45123
0 years, female, NA, stage:2, dead, 570 days
7.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
7.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
7.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
7.3
DO48760
0 years, female, NA, stage:2, alive, 690 days
7.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
7.2
DO50793
0 years, male, NA, stage:4, alive, 540 days
7.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
7.2
DO23521
0 years, male, NA, stage:3, alive, 1110 days
7.1
DO50822
0 years, male, NA, stage:2, alive, 510 days
7.1
DO45223
0 years, male, NA, stage:4, alive, 1020 days
7.1
DO45141
0 years, male, NA, stage:2, alive, 1320 days
7.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
6.9
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.8
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.8
DO45259
0 years, male, NA, stage:3, alive, 330 days
6.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
6.7
DO50800
0 years, male, NA, stage:2, alive, 510 days
6.7
DO23514
0 years, male, NA, stage:2, alive, 1290 days
6.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
6.7
DO45285
0 years, male, NA, stage:3, alive, 480 days
6.6
DO45213
0 years, male, NA, stage:1, alive, 1200 days
6.6
DO45135
0 years, male, NA, stage:1, alive, 1410 days
6.6
DO23523
0 years, male, NA, stage:3, alive, 1080 days
6.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
6.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
6.5
DO50817
0 years, male, NA, stage:2, alive, 390 days
6.3
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.2
DO23552
0 years, female, NA, stage:1, alive, 810 days
6.2
DO48751
0 years, male, NA, stage:2, dead, 480 days
6.2
DO45265
0 years, male, NA, stage:3, alive, 1020 days
6.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
6.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
6.1
DO50814
0 years, male, NA, stage:3, alive, 420 days
6.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
6.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
6.0
DO23548
0 years, female, NA, stage:1, alive, 840 days
5.9
DO50803
0 years, female, NA, stage:1, alive, 540 days
5.9
DO50850
0 years, male, NA, stage:3, alive, 720 days
5.8
DO50774
0 years, female, NA, stage:2, alive, 720 days
5.8
DO23530
0 years, male, NA, stage:4, dead, 180 days
5.7
DO45143
0 years, male, NA, stage:3, alive, 1290 days
5.7
DO45297
0 years, female, NA, stage:4, dead, 1260 days
5.7
DO23537
0 years, male, NA, stage:2, dead, 900 days
5.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
5.6
DO23515
0 years, male, NA, stage:2, alive, 1230 days
5.5
DO48681
0 years, male, NA, stage:2, alive, 900 days
5.5
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
5.5
DO48700
0 years, female, NA, stage:2, alive, 810 days
5.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
5.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
5.4
DO45115
0 years, male, NA, stage:2, alive, 840 days
5.4
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.4
DO23536
0 years, male, NA, stage:2, alive, 930 days
5.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
5.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
5.3
DO48727
0 years, female, NA, stage:2, dead, 390 days
5.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.1
DO45307
0 years, female, NA, stage:4, dead, 240 days
5.1
DO48721
0 years, female, NA, stage:1, alive, 900 days
5.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
4.9
DO48736
0 years, female, NA, stage:1, alive, 600 days
4.8
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.8
DO45305
0 years, male, NA, stage:4, alive, 300 days
4.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
4.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
4.7
DO45261
0 years, male, NA, stage:3, alive, 990 days
4.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
4.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
4.5
DO48719
0 years, male, NA, stage:2, alive, 690 days
4.5
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.3
DO45183
0 years, female, NA, stage:2, dead, 570 days
4.3
DO48737
0 years, male, NA, stage:1, alive, 720 days
4.2
DO50855
0 years, male, NA, stage:2, alive, 570 days
4.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
4.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
4.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
4.1
DO45201
0 years, male, NA, stage:1, alive, 900 days
3.9
DO50789
0 years, female, NA, stage:2, alive, 570 days
3.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
3.8
DO50808
0 years, male, NA, stage:2, alive, 570 days
3.6
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.5
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
3.5
DO50807
0 years, male, NA, stage:1, alive, 540 days
3.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
3.4
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
3.3
DO45191
0 years, female, NA, stage:2, alive, 1200 days
3.2
DO45255
0 years, male, NA, stage:3, alive, 720 days
3.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
3.1
DO45175
0 years, male, NA, stage:2, alive, 1140 days
3.0
DO45167
0 years, male, NA, stage:2, dead, 1440 days
2.8
DO45247
0 years, female, NA, stage:2, alive, 210 days
2.7
DO45129
0 years, male, NA, stage:3, alive, 1470 days
2.5
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.4
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
533
Tumor
0.9
741
Tumor
0.8
123
Tumor
0.7
425
Tumor
0.6
112
Tumor
0.5
423
Tumor
0.5
435
Tumor
0.5
745
Tumor
0.5
361
Tumor
0.5
981
Tumor
0.5
573
Tumor
0.5
433
Tumor
0.5
431
Tumor
0.4
465
Tumor
0.4
445
Tumor
0.4
635
Tumor
0.4
477
Tumor
0.4
257
Tumor
0.4
171
Tumor
0.4
491
Tumor
0.4
353
Tumor
0.4
685
Tumor
0.4
127
Tumor
0.3
443
Tumor
0.3
125
Tumor
0.3
451
Tumor
0.3
867
Tumor
0.3
357
Tumor
0.3
267
Tumor
0.3
231
Tumor
0.3
571
Tumor
0.3
1013
Tumor
0.3
567
Tumor
0.3
113
Tumor
0.3
147
Tumor
0.3
953
Tumor
0.3
937
Tumor
0.2
367
Tumor
0.2
1027
Tumor
0.2
1021
Tumor
0.2
124
Normal
0.2
777
Tumor
0.2
393
Tumor
0.2
141
Tumor
0.2
456
Normal
0.2
375
Tumor
0.2
421
Tumor
0.2
695
Tumor
0.2
277
Tumor
0.2
513
Tumor
0.2
221
Tumor
0.2
464
Normal
0.2
343
Tumor
0.2
358
Normal
0.2
615
Tumor
0.2
187
Tumor
0.2
114
Normal
0.2
452
Normal
0.2
487
Tumor
0.2
222
Normal
0.2
665
Tumor
0.2
186
Normal
0.2
727
Tumor
0.2
525
Tumor
0.2
351
Tumor
0.1
743
Tumor
0.1
271
Tumor
0.1
432
Normal
0.1
232
Normal
0.1
365
Tumor
0.1
977
Tumor
0.1
395
Tumor
0.1
341
Tumor
0.1
376
Normal
0.1
132
Normal
0.1
111
Normal
0.1
1015
Tumor
0.1
368
Normal
0.1
342
Normal
0.1
466
Normal
0.1
663
Tumor
0.1
737
Tumor
0.1
391
Tumor
0.1
261
Tumor
0.1
883
Tumor
0.1
468
Normal
0.1
648
Normal
0.1
366
Normal
0.1
388
Normal
0.1
756
Normal
0.1
196
Normal
0.1
384
Normal
0.1
865
Tumor
0.1
882
Normal
0.1
967
Tumor
0.1
392
Normal
0.1
517
Tumor
0.1
436
Normal
0.1
627
Tumor
0.1
394
Normal
0.1
128
Normal
0.1
755
Tumor
0.1
426
Normal
0.1
344
Normal
0.1
258
Normal
0.1
557
Tumor
0.1
148
Normal
0.1
327
Tumor
0.1
618
Normal
0.1
298
Normal
0.1
354
Normal
0.1
664
Normal
0.1
218
Normal
0.1
523
Tumor
0.1
742
Normal
0.1
636
Normal
0.1
136
Normal
0.1
463
Tumor
0.1
515
Tumor
0.1
427
Tumor
0.1
396
Normal
0.1
813
Tumor
0.1
172
Normal
0.1
268
Normal
0.1
462
Normal
0.1
568
Normal
0.1
824
Normal
0.1
162
Normal
0.1
1045
Tumor
0.1
647
Tumor
0.1
297
Tumor
0.1
278
Normal
0.1
912
Normal
0.1
746
Normal
0.1
362
Normal
0.1
666
Normal
0.1
1025
Tumor
0.1
422
Normal
0.1
161
Tumor
0.1
642
Normal
0.1
446
Normal
0.1
213
Tumor
0.1
428
Normal
0.1
185
Tumor
0.1
352
Normal
0.0
332
Normal
0.0
1022
Normal
0.0
861
Tumor
0.0
858
Normal
0.0
137
Tumor
0.0
616
Normal
0.0
862
Normal
0.0
564
Normal
0.0
444
Normal
0.0
878
Normal
0.0
272
Normal
0.0
138
Normal
0.0
383
Tumor
0.0
1041
Tumor
0.0
482
Normal
0.0
314
Normal
0.0
262
Normal
0.0
1026
Normal
0.0
744
Normal
0.0
572
Normal
0.0
662
Normal
0.0
954
Normal
0.0
214
Normal
0.0
146
Normal
0.0
414
Normal
0.0
923
Tumor
0.0
786
Normal
0.0
672
Normal
0.0
866
Normal
0.0
863
Tumor
0.0
527
Tumor
0.0
723
Tumor
0.0
126
Normal
0.0
434
Normal
0.0
925
Tumor
0.0
785
Tumor
0.0
518
Normal
0.0
641
Tumor
0.0
728
Normal
0.0
818
Normal
0.0
815
Tumor
0.0
497
Tumor
0.0
312
Normal
0.0
671
Tumor
0.0
461
Tumor
0.0
884
Normal
0.0
386
Normal
0.0
424
Normal
0.0
944
Normal
0.0
873
Tumor
0.0
1043
Tumor
0.0
286
Normal
0.0
965
Tumor
0.0
188
Normal
0.0
484
Normal
0.0
411
Tumor
0.0
628
Normal
0.0
698
Normal
0.0
228
Normal
0.0
467
Tumor
0.0
924
Normal
0.0
471
Tumor
0.0
958
Normal
0.0
816
Normal
0.0
964
Normal
0.0
356
Normal
0.0
1016
Normal
0.0
738
Normal
0.0
135
Tumor
0.0
413
Tumor
0.0
951
Tumor
0.0
331
Tumor
0.0
574
Normal
0.0
914
Normal
0.0
224
Normal
0.0
968
Normal
0.0
913
Tumor
0.0
938
Normal
0.0
714
Normal
0.0
448
Normal
0.0
724
Normal
0.0
697
Tumor
0.0
145
Tumor
0.0
617
Tumor
0.0
661
Tumor
0.0
526
Normal
0.0
313
Tumor
0.0
864
Normal
0.0
195
Tumor
0.0
217
Tumor
0.0
1042
Normal
-0.1
192
Normal
-0.1
412
Normal
-0.1
686
Normal
-0.1
563
Tumor
-0.1
1032
Normal
-0.1
952
Normal
-0.1
284
Normal
-0.1
1028
Normal
-0.1
534
Normal
-0.1
558
Normal
-0.1
857
Tumor
-0.1
778
Normal
-0.1
874
Normal
-0.1
142
Normal
-0.1
1046
Normal
-0.1
553
Tumor
-0.1
514
Normal
-0.1
416
Normal
-0.1
546
Normal
-0.1
922
Normal
-0.1
488
Normal
-0.1
212
Normal
-0.1
474
Normal
-0.1
191
Tumor
-0.1
722
Normal
-0.1
975
Tumor
-0.1
851
Tumor
-0.1
472
Normal
-0.1
524
Normal
-0.1
554
Normal
-0.1
481
Tumor
-0.1
984
Normal
-0.1
852
Normal
-0.1
926
Normal
-0.1
957
Tumor
-0.1
696
Normal
-0.1
716
Normal
-0.1
473
Tumor
-0.1
915
Tumor
-0.1
516
Normal
-0.1
814
Normal
-0.1
982
Normal
-0.1
881
Tumor
-0.1
537
Tumor
-0.1
956
Normal
-0.1
227
Tumor
-0.1
868
Normal
-0.1
528
Normal
-0.1
1014
Normal
-0.1
1044
Normal
-0.1
494
Normal
-0.1
966
Normal
-0.1
978
Normal
-0.1
483
Tumor
-0.1
415
Tumor
-0.1
538
Normal
-0.1
918
Normal
-0.1
976
Normal
-0.1
364
Normal
-0.1
823
Tumor
-0.1
328
Normal
-0.1
921
Tumor
-0.2
955
Tumor
-0.2
387
Tumor
-0.2
963
Tumor
-0.2
911
Tumor
-0.2
817
Tumor
-0.2
1031
Tumor
-0.2
478
Normal
-0.2
455
Tumor
-0.2
545
Tumor
-0.2
493
Tumor
-0.2
311
Tumor
-0.2
498
Normal
-0.2
721
Tumor
-0.2
877
Tumor
-0.2
385
Tumor
-0.2
447
Tumor
-0.2
536
Normal
-0.2
916
Normal
-0.2
283
Tumor
-0.2
363
Tumor
-0.2
223
Tumor
-0.2
983
Tumor
-0.3
492
Normal
-0.3
131
Tumor
-0.3
715
Tumor
-0.3
355
Tumor
-0.3
285
Tumor
-0.3
211
Tumor
-0.3
713
Tumor
-0.4
943
Tumor
-0.4
535
Tumor
-0.4
917
Tumor
-0.5
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
