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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPS8L3 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
8.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
68.9
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
68.1
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
66.5
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
63.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
56.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
56.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
53.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
48.1
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
47.8
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
45.9
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
44.2
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
44.1
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
43.2
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
40.7
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
39.9
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
39.0
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
37.9
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
37.3
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
35.6
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
35.5
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
35.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
33.8
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
32.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
32.0
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
31.9
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
31.8
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
30.9
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
29.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
27.9
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
27.5
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
27.2
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
26.7
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
25.7
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
25.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
24.8
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
24.7
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
24.4
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
24.2
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
24.1
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
23.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
23.1
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
22.2
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
21.9
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
21.5
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
21.4
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
21.1
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
21.1
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
20.3
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
20.3
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
20.2
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
20.0
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
19.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
19.7
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
18.4
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
18.4
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
18.4
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
18.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
17.1
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
17.1
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
16.7
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
16.6
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
14.8
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
14.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
14.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
14.6
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
14.3
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
14.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
13.8
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
13.7
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
13.5
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
13.4
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
13.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
13.2
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
13.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
13.1
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
13.1
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
12.7
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
12.5
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
12.2
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
12.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
11.8
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
11.6
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.5
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
11.4
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
11.4
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
11.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
11.3
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
11.2
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
11.1
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
11.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
10.9
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
10.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
10.9
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
10.8
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
10.2
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
10.0
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
9.9
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
9.8
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
9.8
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
9.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
9.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
9.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
9.3
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
9.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
9.2
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
9.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
8.8
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
8.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
8.8
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
8.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
8.6
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
8.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.2
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
7.9
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
7.9
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
7.8
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
7.6
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
7.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
7.5
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
7.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
7.4
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
7.2
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
7.1
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
7.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
7.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
6.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
6.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
6.7
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
6.7
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
6.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
6.6
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
6.5
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
6.5
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
6.5
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
6.4
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
6.4
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
6.4
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
6.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
6.1
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
6.1
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
6.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
5.9
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
5.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
5.9
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
5.8
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
5.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
5.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
5.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
5.4
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
5.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
5.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
5.3
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
5.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
5.3
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
5.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
5.2
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
5.1
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.1
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
5.0
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
5.0
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
4.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
4.9
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
4.8
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
4.8
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
4.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
4.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
4.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
4.4
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
4.2
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
4.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
4.1
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
4.1
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
4.0
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
4.0
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
3.9
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
3.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
3.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
3.8
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
3.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
3.6
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
3.6
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
3.6
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
3.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
3.5
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
3.5
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
3.5
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
3.5
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
3.4
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
3.4
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
3.3
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
3.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
3.0
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
2.9
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
2.8
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
2.8
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
2.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
2.6
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
2.6
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
2.6
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
2.5
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
2.5
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
2.4
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
2.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
2.4
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
2.4
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
2.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
2.3
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
2.2
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
2.2
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
2.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
2.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
2.1
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
2.0
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
2.0
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
2.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
2.0
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
1.9
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
1.9
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1.9
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
1.9
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1.9
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
1.9
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
1.9
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
1.8
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
1.8
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
1.8
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
1.8
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
1.7
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
1.7
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1.7
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
1.6
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
1.6
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
1.5
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
1.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
1.4
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
1.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
1.3
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
1.3
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
1.3
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
1.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
1.2
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
1.1
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
1.1
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
1.1
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
1.1
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
1.0
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
1.0
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
1.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.9
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
0.9
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
0.9
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
0.8
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
0.8
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
0.8
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
0.8
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
0.8
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
0.8
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
0.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
0.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
0.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
0.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
0.6
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
0.6
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
0.6
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
0.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
0.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
0.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
0.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
0.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
0.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
0.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
0.5
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
0.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
0.5
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
0.5
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
0.5
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
0.5
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
0.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
0.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
0.4
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
0.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
0.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
0.4
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
0.4
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
0.4
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
0.4
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
0.4
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
0.4
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
0.3
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
0.3
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
0.3
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
0.3
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
0.3
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
0.3
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
0.3
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
0.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
0.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
0.2
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
0.2
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
0.2
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
0.2
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
0.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.2
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
0.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
0.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
0.2
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
0.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
0.2
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
0.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
0.1
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
0.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
0.1
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
0.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
0.1
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
0.1
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
0.1
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
0.1
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
0.1
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
0.1
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
0.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
0.1
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
0.1
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
0.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
0.0
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
0.0
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
0.0
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
0.0
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
0.0
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
0.0
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
0.0
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
0.0
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
0.0
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
0.0
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
0.0
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
0.0
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
0.0
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
0.0
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
0.0
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
0.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
0.0
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
0.0
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
0.0
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
0.0
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
0.0
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
0.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
0.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
0.0
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
0.0
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
0.0
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
0.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.0
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
0.0
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
0.0
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.0
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
0.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
0.0
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
EPS8L3 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
10.0
Number of samples
231
Samples
Sample
Description
TPM
DO45297
0 years, female, NA, stage:4, dead, 1260 days
218.1
DO45301
0 years, male, NA, stage:2, dead, 1440 days
92.9
DO48737
0 years, male, NA, stage:1, alive, 720 days
72.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
72.0
DO50845
0 years, male, NA, stage:3, alive, 210 days
67.6
DO48723
0 years, male, NA, stage:1, alive, 600 days
54.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
54.7
DO45279
0 years, male, NA, stage:3, alive, 1290 days
50.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
45.1
DO45289
0 years, female, NA, stage:3, alive, 360 days
39.9
DO45263
0 years, male, NA, stage:3, dead, 270 days
38.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
37.9
DO48700
0 years, female, NA, stage:2, alive, 810 days
37.5
DO45299
0 years, female, NA, stage:1, alive, 1440 days
37.3
DO23529
0 years, male, NA, stage:4, alive, 930 days
36.1
DO50825
0 years, male, NA, stage:2, alive, 390 days
36.1
DO23547
0 years, male, NA, stage:1, alive, 1020 days
33.6
DO23513
0 years, male, NA, stage:3, alive, 1200 days
32.5
DO48751
0 years, male, NA, stage:2, dead, 480 days
31.8
DO45185
0 years, male, NA, stage:2, alive, 600 days
31.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
30.0
DO45269
0 years, male, NA, stage:3, alive, 750 days
29.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
29.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
26.9
DO48681
0 years, male, NA, stage:2, alive, 900 days
25.5
DO23511
0 years, female, NA, stage:3, dead, 180 days
25.1
DO45145
0 years, male, NA, stage:3, dead, 60 days
23.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
23.1
DO50778
0 years, male, NA, stage:4, alive, 630 days
22.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
22.0
DO50855
0 years, male, NA, stage:2, alive, 570 days
21.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
21.6
DO23545
0 years, male, NA, stage:2, dead, 570 days
20.2
DO50806
0 years, male, NA, stage:4, alive, 540 days
19.1
DO45249
0 years, male, NA, stage:1, alive, 630 days
18.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
17.9
DO45092
0 years, male, NA, stage:4, dead, 1200 days
17.5
DO45243
0 years, female, NA, stage:3, alive, 930 days
17.4
DO45131
0 years, male, NA, stage:4, dead, 360 days
17.4
DO45091
0 years, male, NA, stage:2, dead, 1320 days
16.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
16.6
DO45241
0 years, male, NA, stage:1, alive, 1080 days
16.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
16.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
15.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
15.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
15.7
DO45281
0 years, male, NA, stage:4, alive, 750 days
15.6
DO45285
0 years, male, NA, stage:3, alive, 480 days
15.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
15.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
14.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
14.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
14.5
DO23524
0 years, female, NA, stage:2, alive, 1050 days
14.3
DO45139
0 years, male, NA, stage:3, alive, 1320 days
14.1
DO45221
0 years, female, NA, stage:4, dead, 390 days
14.1
DO45191
0 years, female, NA, stage:2, alive, 1200 days
13.5
DO48693
0 years, male, NA, stage:2, alive, 900 days
13.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
12.6
DO48697
0 years, female, NA, stage:2, dead, 810 days
12.4
DO48682
0 years, female, NA, stage:3, dead, 120 days
11.9
DO50822
0 years, male, NA, stage:2, alive, 510 days
11.6
DO23521
0 years, male, NA, stage:3, alive, 1110 days
11.5
DO45213
0 years, male, NA, stage:1, alive, 1200 days
10.7
DO45121
0 years, male, NA, stage:3, alive, 1530 days
10.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
10.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
10.1
DO23539
0 years, male, NA, stage:1, alive, 1110 days
9.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
9.7
DO45115
0 years, male, NA, stage:2, alive, 840 days
9.3
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.2
DO48728
0 years, female, NA, stage:2, alive, 150 days
9.0
DO48736
0 years, female, NA, stage:1, alive, 600 days
8.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
8.3
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
8.3
DO48743
0 years, female, NA, stage:2, alive, 570 days
8.1
DO23530
0 years, male, NA, stage:4, dead, 180 days
8.1
DO45245
0 years, female, NA, stage:2, dead, 240 days
7.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
6.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.7
DO45239
0 years, male, NA, stage:2, alive, 870 days
6.7
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.6
DO48717
0 years, male, NA, stage:4, dead, 180 days
6.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
6.1
DO45283
0 years, male, NA, stage:3, alive, 510 days
5.9
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
5.3
DO45155
0 years, male, NA, stage:2, alive, 2160 days
5.2
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
5.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
5.0
DO45303
0 years, female, NA, stage:3, alive, 990 days
5.0
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
4.8
DO48719
0 years, male, NA, stage:2, alive, 690 days
4.7
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.6
DO45275
0 years, male, NA, stage:3, dead, 10 days
4.5
DO48742
0 years, male, NA, stage:2, alive, 600 days
4.4
DO45193
0 years, female, NA, stage:4, dead, 120 days
4.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
4.3
DO50791
0 years, female, NA, stage:1, dead, 480 days
4.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
4.2
DO50805
0 years, male, NA, stage:2, alive, 690 days
4.1
DO50774
0 years, female, NA, stage:2, alive, 720 days
4.1
DO45105
0 years, male, NA, stage:1, alive, 1680 days
4.1
DO50857
0 years, male, NA, stage:2, alive, 210 days
4.1
DO45095
0 years, male, NA, stage:2, alive, 1620 days
4.1
DO45199
0 years, female, NA, stage:2, alive, 1350 days
3.9
DO45093
0 years, male, NA, stage:2, dead, 720 days
3.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
3.8
DO23546
0 years, male, NA, stage:2, alive, 1050 days
3.4
DO48716
0 years, male, NA, stage:2, alive, 720 days
3.3
DO45097
0 years, male, NA, stage:3, alive, 1620 days
3.3
DO45189
0 years, female, NA, stage:2, alive, 1200 days
3.0
DO23514
0 years, male, NA, stage:2, alive, 1290 days
3.0
DO45101
0 years, male, NA, stage:2, alive, 1680 days
3.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
3.0
DO45307
0 years, female, NA, stage:4, dead, 240 days
2.9
DO50799
0 years, female, NA, stage:2, alive, 540 days
2.7
DO45161
0 years, male, NA, stage:2, dead, 540 days
2.7
DO50816
0 years, male, NA, stage:2, alive, 390 days
2.7
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.7
DO227801
0 years, female, NA, stage:1, alive, 660 days
2.6
DO23533
0 years, male, NA, stage:2, alive, 900 days
2.4
DO50839
0 years, female, NA, stage:3, alive, 330 days
2.4
DO45171
0 years, male, NA, stage:3, alive, 600 days
2.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
2.4
DO45207
0 years, male, NA, stage:1, alive, 1050 days
2.3
DO23527
0 years, male, NA, stage:1, alive, 1050 days
2.2
DO48712
0 years, male, NA, stage:2, alive, 810 days
2.1
DO45129
0 years, male, NA, stage:3, alive, 1470 days
2.1
DO45187
0 years, female, NA, stage:1, alive, 1260 days
2.1
DO50815
0 years, male, NA, stage:3, alive, 150 days
2.1
DO45153
0 years, female, NA, stage:2, alive, 1380 days
2.0
DO45109
0 years, male, NA, stage:2, alive, 1590 days
1.9
DO45217
0 years, female, NA, stage:3, dead, 270 days
1.9
DO45163
0 years, male, NA, stage:2, alive, 960 days
1.9
DO45096
0 years, male, NA, stage:2, dead, 1290 days
1.9
DO45111
0 years, male, NA, stage:2, alive, 1590 days
1.8
DO48730
0 years, female, NA, stage:2, alive, 630 days
1.8
DO45167
0 years, male, NA, stage:2, dead, 1440 days
1.7
DO45107
0 years, female, NA, stage:2, alive, 1710 days
1.7
DO23536
0 years, male, NA, stage:2, alive, 930 days
1.7
DO45117
0 years, female, NA, stage:2, dead, 1110 days
1.7
DO50819
0 years, female, NA, stage:2, alive, 510 days
1.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
1.6
DO45141
0 years, male, NA, stage:2, alive, 1320 days
1.5
DO45201
0 years, male, NA, stage:1, alive, 900 days
1.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
1.4
DO23538
0 years, male, NA, stage:2, alive, 450 days
1.3
DO45123
0 years, female, NA, stage:2, dead, 570 days
1.3
DO23549
0 years, male, NA, stage:3, alive, 990 days
1.2
DO45179
0 years, female, NA, stage:2, alive, 600 days
1.2
DO23537
0 years, male, NA, stage:2, dead, 900 days
1.2
DO45197
0 years, male, NA, stage:2, alive, 1170 days
1.1
DO23535
0 years, male, NA, stage:1, alive, 960 days
1.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
1.0
DO48741
0 years, male, NA, stage:3, alive, 240 days
1.0
DO50844
0 years, male, NA, stage:4, alive, 300 days
0.9
DO45233
0 years, male, NA, stage:3, alive, 900 days
0.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
0.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
0.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
0.7
DO45159
0 years, male, NA, stage:3, alive, 1470 days
0.7
DO23540
0 years, male, NA, stage:1, alive, 750 days
0.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
0.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
0.7
DO50789
0 years, female, NA, stage:2, alive, 570 days
0.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
0.7
DO48747
0 years, male, NA, stage:3, alive, 540 days
0.7
DO45094
0 years, male, NA, stage:3, alive, 1650 days
0.6
DO45229
0 years, male, NA, stage:1, alive, 990 days
0.6
DO23534
0 years, male, NA, stage:2, alive, 840 days
0.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
0.6
DO50808
0 years, male, NA, stage:2, alive, 570 days
0.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
0.6
DO48706
0 years, male, NA, stage:2, alive, 870 days
0.6
DO45247
0 years, female, NA, stage:2, alive, 210 days
0.5
DO48746
0 years, male, NA, stage:3, alive, 570 days
0.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
0.5
DO23544
0 years, male, NA, stage:2, alive, 960 days
0.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
0.5
DO48721
0 years, female, NA, stage:1, alive, 900 days
0.5
DO45119
0 years, male, NA, stage:3, dead, 510 days
0.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
0.5
DO48704
0 years, female, NA, stage:3, alive, 750 days
0.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
0.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
0.4
DO45253
0 years, male, NA, stage:2, alive, 870 days
0.3
DO23548
0 years, female, NA, stage:1, alive, 840 days
0.3
DO23509
0 years, male, NA, stage:3, dead, 780 days
0.3
DO45177
0 years, female, NA, stage:3, alive, 1260 days
0.3
DO48732
0 years, male, NA, stage:3, alive, 630 days
0.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
0.3
DO23525
0 years, male, NA, stage:4, alive, 1050 days
0.3
DO50800
0 years, male, NA, stage:2, alive, 510 days
0.3
DO45227
0 years, female, NA, stage:2, alive, 1020 days
0.3
DO50832
0 years, male, NA, stage:3, alive, 90 days
0.3
DO45235
0 years, female, NA, stage:1, alive, 900 days
0.3
DO45255
0 years, male, NA, stage:3, alive, 720 days
0.3
DO45113
0 years, male, NA, stage:3, alive, 1560 days
0.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
0.2
DO23532
0 years, female, NA, stage:1, alive, 960 days
0.2
DO50787
0 years, male, NA, stage:3, alive, 480 days
0.2
DO48759
0 years, male, NA, stage:3, alive, 720 days
0.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
0.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
0.2
DO227643
0 years, male, NA, stage:2, alive, 1260 days
0.2
DO45133
0 years, male, NA, stage:3, dead, 660 days
0.2
DO50798
0 years, male, NA, stage:3, dead, 30 days
0.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
0.2
DO50840
0 years, male, NA, stage:2, alive, 330 days
0.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
0.2
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
0.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.1
DO23550
0 years, male, NA, stage:1, alive, 990 days
0.1
DO50813
0 years, male, NA, stage:2, alive, 420 days
0.1
DO50811
0 years, male, NA, stage:1, alive, 450 days
0.1
DO23551
0 years, male, NA, stage:3, dead, 150 days
0.1
DO45211
0 years, male, NA, stage:3, alive, 240 days
0.1
DO45225
0 years, male, NA, stage:1, alive, 1050 days
0.1
DO50804
0 years, male, NA, stage:2, alive, 720 days
0.1
DO45125
0 years, male, NA, stage:3, alive, 1680 days
0.1
DO50807
0 years, male, NA, stage:1, alive, 540 days
0.1
DO50803
0 years, female, NA, stage:1, alive, 540 days
0.1
DO50818
0 years, male, NA, stage:2, alive, 510 days
0.1
DO23531
0 years, female, NA, stage:3, alive, 900 days
0.0
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.0
DO50817
0 years, male, NA, stage:2, alive, 390 days
0.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
123
Tumor
2.6
395
Tumor
2.1
953
Tumor
2.1
741
Tumor
2.1
915
Tumor
2.0
351
Tumor
2.0
983
Tumor
2.0
851
Tumor
1.9
724
Normal
1.9
665
Tumor
1.9
715
Tumor
1.9
191
Tumor
1.9
535
Tumor
1.8
967
Tumor
1.8
497
Tumor
1.7
355
Tumor
1.7
815
Tumor
1.6
383
Tumor
1.6
231
Tumor
1.5
957
Tumor
1.5
131
Tumor
1.5
393
Tumor
1.4
545
Tumor
1.4
567
Tumor
1.4
223
Tumor
1.4
311
Tumor
1.2
413
Tumor
1.2
865
Tumor
1.2
285
Tumor
1.2
911
Tumor
1.2
145
Tumor
1.1
331
Tumor
1.0
147
Tumor
1.0
1021
Tumor
1.0
975
Tumor
0.9
881
Tumor
0.8
427
Tumor
0.8
857
Tumor
0.8
171
Tumor
0.8
447
Tumor
0.7
1013
Tumor
0.7
553
Tumor
0.6
135
Tumor
0.6
813
Tumor
0.6
661
Tumor
0.5
697
Tumor
0.4
297
Tumor
0.4
641
Tumor
0.4
391
Tumor
0.4
271
Tumor
0.3
451
Tumor
0.3
921
Tumor
0.3
367
Tumor
0.3
433
Tumor
0.3
951
Tumor
0.3
635
Tumor
0.3
187
Tumor
0.3
127
Tumor
0.2
737
Tumor
0.2
713
Tumor
0.2
361
Tumor
0.2
557
Tumor
0.2
461
Tumor
0.2
396
Normal
0.1
861
Tumor
0.1
365
Tumor
0.1
124
Normal
0.1
527
Tumor
0.1
467
Tumor
0.1
267
Tumor
0.1
814
Normal
0.0
617
Tumor
0.0
217
Tumor
0.0
493
Tumor
0.0
965
Tumor
0.0
471
Tumor
0.0
685
Tumor
0.0
431
Tumor
0.0
525
Tumor
-0.1
261
Tumor
-0.1
445
Tumor
-0.1
394
Normal
-0.1
877
Tumor
-0.1
161
Tumor
-0.1
1031
Tumor
-0.1
375
Tumor
-0.1
537
Tumor
-0.1
666
Normal
-0.1
352
Normal
-0.2
258
Normal
-0.2
627
Tumor
-0.2
388
Normal
-0.2
386
Normal
-0.2
262
Normal
-0.2
313
Tumor
-0.2
357
Tumor
-0.3
671
Tumor
-0.3
392
Normal
-0.3
343
Tumor
-0.3
721
Tumor
-0.3
411
Tumor
-0.3
125
Tumor
-0.3
353
Tumor
-0.3
573
Tumor
-0.3
358
Normal
-0.3
232
Normal
-0.3
354
Normal
-0.3
272
Normal
-0.4
663
Tumor
-0.4
384
Normal
-0.4
523
Tumor
-0.4
428
Normal
-0.4
817
Tumor
-0.4
268
Normal
-0.4
342
Normal
-0.4
498
Normal
-0.4
963
Tumor
-0.4
976
Normal
-0.4
1025
Tumor
-0.5
642
Normal
-0.5
387
Tumor
-0.5
923
Tumor
-0.5
114
Normal
-0.5
672
Normal
-0.5
422
Normal
-0.5
463
Tumor
-0.5
113
Tumor
-0.5
867
Tumor
-0.6
618
Normal
-0.6
615
Tumor
-0.6
426
Normal
-0.6
546
Normal
-0.6
455
Tumor
-0.6
424
Normal
-0.6
742
Normal
-0.6
126
Normal
-0.6
423
Tumor
-0.6
1027
Tumor
-0.6
648
Normal
-0.6
943
Tumor
-0.6
344
Normal
-0.6
368
Normal
-0.6
727
Tumor
-0.6
376
Normal
-0.6
385
Tumor
-0.6
723
Tumor
-0.6
964
Normal
-0.6
483
Tumor
-0.7
982
Normal
-0.7
312
Normal
-0.7
664
Normal
-0.7
823
Tumor
-0.7
298
Normal
-0.7
628
Normal
-0.7
314
Normal
-0.7
421
Tumor
-0.7
414
Normal
-0.7
818
Normal
-0.7
1041
Tumor
-0.7
738
Normal
-0.7
341
Tumor
-0.7
968
Normal
-0.7
112
Tumor
-0.8
917
Tumor
-0.8
137
Tumor
-0.8
443
Tumor
-0.8
647
Tumor
-0.8
278
Normal
-0.8
257
Tumor
-0.8
563
Tumor
-0.8
554
Normal
-0.8
662
Normal
-0.8
636
Normal
-0.8
534
Normal
-0.8
456
Normal
-0.8
517
Tumor
-0.8
777
Tumor
-0.8
1016
Normal
-0.8
568
Normal
-0.8
362
Normal
-0.8
977
Tumor
-0.8
464
Normal
-0.8
332
Normal
-0.8
744
Normal
-0.8
984
Normal
-0.8
277
Tumor
-0.8
824
Normal
-0.8
128
Normal
-0.8
954
Normal
-0.9
515
Tumor
-0.9
111
Normal
-0.9
1043
Tumor
-0.9
172
Normal
-0.9
852
Normal
-0.9
966
Normal
-0.9
722
Normal
-0.9
925
Tumor
-0.9
926
Normal
-0.9
866
Normal
-0.9
188
Normal
-0.9
616
Normal
-0.9
958
Normal
-0.9
1014
Normal
-0.9
1046
Normal
-0.9
465
Tumor
-0.9
698
Normal
-0.9
416
Normal
-0.9
858
Normal
-1.0
366
Normal
-1.0
536
Normal
-1.0
978
Normal
-1.0
728
Normal
-1.0
528
Normal
-1.0
224
Normal
-1.0
533
Tumor
-1.0
714
Normal
-1.0
564
Normal
-1.0
138
Normal
-1.0
468
Normal
-1.0
916
Normal
-1.0
452
Normal
-1.0
538
Normal
-1.0
514
Normal
-1.0
526
Normal
-1.1
132
Normal
-1.1
142
Normal
-1.1
1045
Tumor
-1.1
922
Normal
-1.1
185
Tumor
-1.1
914
Normal
-1.1
148
Normal
-1.1
448
Normal
-1.1
186
Normal
-1.1
745
Tumor
-1.1
981
Tumor
-1.1
425
Tumor
-1.1
574
Normal
-1.1
716
Normal
-1.1
228
Normal
-1.2
918
Normal
-1.2
696
Normal
-1.2
162
Normal
-1.2
816
Normal
-1.2
863
Tumor
-1.2
466
Normal
-1.2
195
Tumor
-1.2
1015
Tumor
-1.2
444
Normal
-1.2
571
Tumor
-1.2
283
Tumor
-1.2
912
Normal
-1.2
868
Normal
-1.2
513
Tumor
-1.2
516
Normal
-1.3
864
Normal
-1.3
884
Normal
-1.3
873
Tumor
-1.3
572
Normal
-1.3
286
Normal
-1.3
558
Normal
-1.3
284
Normal
-1.3
686
Normal
-1.3
883
Tumor
-1.3
136
Normal
-1.3
1044
Normal
-1.3
874
Normal
-1.3
488
Normal
-1.3
482
Normal
-1.3
882
Normal
-1.3
141
Tumor
-1.3
146
Normal
-1.4
491
Tumor
-1.4
924
Normal
-1.4
1022
Normal
-1.4
518
Normal
-1.4
462
Normal
-1.4
212
Normal
-1.4
494
Normal
-1.4
192
Normal
-1.4
221
Tumor
-1.4
328
Normal
-1.4
862
Normal
-1.5
196
Normal
-1.5
1042
Normal
-1.5
1026
Normal
-1.5
743
Tumor
-1.5
227
Tumor
-1.5
432
Normal
-1.5
524
Normal
-1.5
484
Normal
-1.5
756
Normal
-1.5
492
Normal
-1.5
446
Normal
-1.5
222
Normal
-1.5
695
Tumor
-1.6
477
Tumor
-1.6
213
Tumor
-1.6
878
Normal
-1.7
356
Normal
-1.7
472
Normal
-1.7
1032
Normal
-1.7
214
Normal
-1.7
481
Tumor
-1.7
478
Normal
-1.7
913
Tumor
-1.7
436
Normal
-1.7
218
Normal
-1.7
1028
Normal
-1.7
474
Normal
-1.8
434
Normal
-1.8
415
Tumor
-1.8
944
Normal
-1.8
364
Normal
-1.8
778
Normal
-1.8
473
Tumor
-1.8
211
Tumor
-1.8
327
Tumor
-1.8
952
Normal
-1.9
786
Normal
-1.9
937
Tumor
-1.9
487
Tumor
-1.9
412
Normal
-2.0
956
Normal
-2.0
755
Tumor
-2.0
435
Tumor
-2.0
938
Normal
-2.1
955
Tumor
-2.1
746
Normal
-2.2
785
Tumor
-2.2
363
Tumor
-3.7
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
