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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IPO9 is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
20.6
Number of samples
362
Samples
Sample
Description
TPM
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
69.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
67.9
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
56.9
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
56.5
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
53.5
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
50.4
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
47.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
46.6
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
46.3
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
45.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
44.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
43.4
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
41.7
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
40.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
40.4
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
39.7
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
38.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
37.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
37.6
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
37.3
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
36.8
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
35.8
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
35.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
35.6
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
35.3
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
35.0
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
34.9
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
34.8
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
33.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
33.3
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
33.3
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
33.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
33.1
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
33.0
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
33.0
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
32.9
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
32.9
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
32.7
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
32.7
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
32.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
32.4
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
32.4
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
32.0
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
32.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
31.9
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
31.5
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
31.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
31.0
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
31.0
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
30.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
30.6
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
30.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
30.1
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
30.0
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
29.9
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
29.7
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
29.6
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
29.4
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
29.2
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
29.1
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
29.0
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
28.8
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
28.6
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
28.4
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
28.4
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
28.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
28.1
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
27.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
27.5
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
27.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
27.3
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
27.2
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
27.1
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
27.0
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
26.9
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
26.8
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
26.7
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
26.7
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
26.2
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
26.1
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
26.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
26.0
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
25.8
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
25.8
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
25.7
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
25.7
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
25.5
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
25.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
25.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
25.3
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
25.3
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
25.3
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
25.3
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
25.1
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
25.1
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
25.1
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
25.0
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
24.9
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
24.9
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
24.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
24.7
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
24.7
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
24.7
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
24.6
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
24.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
24.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
24.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
24.1
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
24.0
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
24.0
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
23.8
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
23.7
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
23.6
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
23.6
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
23.6
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
23.5
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
23.5
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
23.5
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
23.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
23.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
22.8
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
22.7
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
22.7
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
22.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
22.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
22.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
22.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
22.2
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
22.2
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
22.1
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
22.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
22.0
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
22.0
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
21.9
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
21.7
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
21.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
21.5
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
21.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
21.2
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
21.1
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
21.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
20.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
20.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
20.7
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
20.5
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
20.5
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
20.4
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
20.4
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
20.4
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
20.3
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
20.2
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
20.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
20.0
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
20.0
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
19.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
19.6
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
19.5
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
19.5
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
19.4
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
19.4
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
19.3
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
19.1
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
19.1
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
19.1
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
19.0
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
18.9
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
18.8
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
18.8
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
18.8
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
18.7
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
18.6
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
18.6
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
18.6
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
18.6
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
18.6
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
18.5
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
18.5
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
18.4
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
18.3
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
18.3
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
18.2
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
18.1
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
18.1
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
18.1
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
18.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
18.0
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
18.0
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
17.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
17.8
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
17.7
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
17.7
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
17.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
17.7
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
17.6
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
17.4
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
17.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
17.3
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
17.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
17.2
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
17.2
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
17.1
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
17.1
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
17.0
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
17.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
17.0
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
16.9
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
16.9
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
16.9
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
16.9
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
16.8
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
16.8
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
16.7
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
16.7
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
16.6
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
16.5
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
16.5
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
16.2
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
16.2
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
16.2
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
16.1
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
16.1
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
16.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
16.1
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
16.1
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
16.0
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
16.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
15.9
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
15.7
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
15.6
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
15.6
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
15.6
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
15.6
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
15.6
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
15.5
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
15.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
15.4
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
15.4
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
15.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
15.4
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
15.4
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
15.3
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.2
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
15.2
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
15.2
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
15.2
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
15.1
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
15.1
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
15.1
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
15.0
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
15.0
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
14.9
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
14.9
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
14.8
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
14.8
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
14.8
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
14.7
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
14.7
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
14.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
14.7
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
14.6
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
14.6
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
14.5
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
14.5
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
14.5
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
14.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
14.5
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
14.5
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
14.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
14.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
14.4
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
14.2
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
14.2
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
14.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
14.0
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
14.0
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
13.9
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
13.9
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
13.9
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
13.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
13.8
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
13.8
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
13.7
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
13.6
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
13.6
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
13.5
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
13.5
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
13.4
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
13.4
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
13.4
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
13.4
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
13.4
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
13.3
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
13.1
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
13.1
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
13.1
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
13.0
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
13.0
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
13.0
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
13.0
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
13.0
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
13.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
12.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
12.7
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
12.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
12.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
12.6
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
12.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
12.5
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
12.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
12.3
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
12.2
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
12.2
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
12.2
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.0
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
11.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
11.9
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
11.7
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
11.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
11.5
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
11.3
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
11.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
11.2
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
11.2
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
11.1
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
11.1
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
11.0
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
10.8
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.7
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
10.7
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
10.6
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
10.6
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
10.3
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
10.3
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
10.1
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
9.9
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
9.8
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
9.8
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
9.7
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
9.6
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
9.6
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
9.5
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
9.3
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
9.3
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
9.1
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
9.0
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
9.0
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.9
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
8.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
8.7
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
8.6
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
8.5
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
8.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
8.4
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
8.4
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
8.0
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
7.8
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
7.6
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
7.6
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
7.1
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
7.0
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
6.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
IPO9 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
6.9
Number of samples
231
Samples
Sample
Description
TPM
DO45275
0 years, male, NA, stage:3, dead, 10 days
20.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
19.7
DO45193
0 years, female, NA, stage:4, dead, 120 days
17.5
DO48757
0 years, female, NA, stage:3, alive, 480 days
15.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
14.5
DO45121
0 years, male, NA, stage:3, alive, 1530 days
14.3
DO48681
0 years, male, NA, stage:2, alive, 900 days
14.1
DO45117
0 years, female, NA, stage:2, dead, 1110 days
14.1
DO50820
0 years, female, NA, stage:3, alive, 510 days
14.0
DO50802
0 years, male, NA, stage:2, alive, 930 days
13.7
DO45199
0 years, female, NA, stage:2, alive, 1350 days
13.6
DO45259
0 years, male, NA, stage:3, alive, 330 days
13.1
DO45155
0 years, male, NA, stage:2, alive, 2160 days
13.0
DO23509
0 years, male, NA, stage:3, dead, 780 days
12.8
DO45235
0 years, female, NA, stage:1, alive, 900 days
12.2
DO45257
0 years, male, NA, stage:3, alive, 810 days
12.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
12.0
DO48717
0 years, male, NA, stage:4, dead, 180 days
12.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.7
DO45205
0 years, female, NA, stage:2, dead, 90 days
11.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
11.5
DO45237
0 years, male, NA, stage:2, alive, 900 days
11.3
DO45207
0 years, male, NA, stage:1, alive, 1050 days
11.1
DO45279
0 years, male, NA, stage:3, alive, 1290 days
11.0
DO45123
0 years, female, NA, stage:2, dead, 570 days
11.0
DO45209
0 years, male, NA, stage:4, alive, 1350 days
10.9
DO45189
0 years, female, NA, stage:2, alive, 1200 days
10.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
10.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
10.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
10.3
DO45159
0 years, male, NA, stage:3, alive, 1470 days
10.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
10.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
10.2
DO45281
0 years, male, NA, stage:4, alive, 750 days
10.0
DO48706
0 years, male, NA, stage:2, alive, 870 days
9.9
DO50815
0 years, male, NA, stage:3, alive, 150 days
9.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
9.8
DO48737
0 years, male, NA, stage:1, alive, 720 days
9.6
DO45239
0 years, male, NA, stage:2, alive, 870 days
9.5
DO45163
0 years, male, NA, stage:2, alive, 960 days
9.5
DO23526
0 years, male, NA, stage:3, alive, 1050 days
9.4
DO45137
0 years, male, NA, stage:1, alive, 1320 days
9.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
9.2
DO45203
0 years, female, NA, stage:2, alive, 1170 days
9.2
DO48736
0 years, female, NA, stage:1, alive, 600 days
9.2
DO45263
0 years, male, NA, stage:3, dead, 270 days
9.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.1
DO45305
0 years, male, NA, stage:4, alive, 300 days
9.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.1
DO23543
0 years, male, NA, stage:2, alive, 1020 days
9.1
DO45287
0 years, male, NA, stage:1, alive, 390 days
9.0
DO50798
0 years, male, NA, stage:3, dead, 30 days
8.9
DO48721
0 years, female, NA, stage:1, alive, 900 days
8.9
DO23548
0 years, female, NA, stage:1, alive, 840 days
8.8
DO50778
0 years, male, NA, stage:4, alive, 630 days
8.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
8.5
DO45273
0 years, male, NA, stage:2, alive, 480 days
8.5
DO23552
0 years, female, NA, stage:1, alive, 810 days
8.4
DO45179
0 years, female, NA, stage:2, alive, 600 days
8.4
DO50840
0 years, male, NA, stage:2, alive, 330 days
8.3
DO23532
0 years, female, NA, stage:1, alive, 960 days
8.3
DO23533
0 years, male, NA, stage:2, alive, 900 days
8.3
DO48695
0 years, male, NA, stage:2, alive, 720 days
8.1
DO23542
0 years, male, NA, stage:3, alive, 960 days
8.1
DO45096
0 years, male, NA, stage:2, dead, 1290 days
7.9
DO50791
0 years, female, NA, stage:1, dead, 480 days
7.8
DO23516
0 years, male, NA, stage:3, dead, 20 days
7.8
DO23539
0 years, male, NA, stage:1, alive, 1110 days
7.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
7.8
DO45303
0 years, female, NA, stage:3, alive, 990 days
7.7
DO45267
0 years, male, NA, stage:3, dead, 570 days
7.7
DO45092
0 years, male, NA, stage:4, dead, 1200 days
7.6
DO48704
0 years, female, NA, stage:3, alive, 750 days
7.6
DO23511
0 years, female, NA, stage:3, dead, 180 days
7.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
7.6
DO50816
0 years, male, NA, stage:2, alive, 390 days
7.5
DO23508
0 years, female, NA, stage:2, alive, 390 days
7.5
DO48727
0 years, female, NA, stage:2, dead, 390 days
7.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
7.3
DO45283
0 years, male, NA, stage:3, alive, 510 days
7.3
DO48746
0 years, male, NA, stage:3, alive, 570 days
7.2
DO48720
0 years, female, NA, stage:2, alive, 570 days
7.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
7.2
DO48700
0 years, female, NA, stage:2, alive, 810 days
7.2
DO23545
0 years, male, NA, stage:2, dead, 570 days
7.1
DO45183
0 years, female, NA, stage:2, dead, 570 days
7.1
DO45197
0 years, male, NA, stage:2, alive, 1170 days
7.1
DO23549
0 years, male, NA, stage:3, alive, 990 days
7.0
DO48701
0 years, male, NA, stage:2, alive, 780 days
7.0
DO50825
0 years, male, NA, stage:2, alive, 390 days
7.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
7.0
DO23512
0 years, male, NA, stage:1, alive, 1260 days
7.0
DO48751
0 years, male, NA, stage:2, dead, 480 days
7.0
DO45177
0 years, female, NA, stage:3, alive, 1260 days
6.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
6.9
DO45245
0 years, female, NA, stage:2, dead, 240 days
6.9
DO50829
0 years, male, NA, stage:3, alive, 570 days
6.9
DO48743
0 years, female, NA, stage:2, alive, 570 days
6.8
DO50793
0 years, male, NA, stage:4, alive, 540 days
6.7
DO23518
0 years, male, NA, stage:2, alive, 1320 days
6.7
DO45225
0 years, male, NA, stage:1, alive, 1050 days
6.7
DO23525
0 years, male, NA, stage:4, alive, 1050 days
6.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
6.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
6.6
DO45103
0 years, male, NA, stage:3, alive, 450 days
6.6
DO45145
0 years, male, NA, stage:3, dead, 60 days
6.6
DO23535
0 years, male, NA, stage:1, alive, 960 days
6.5
DO48741
0 years, male, NA, stage:3, alive, 240 days
6.5
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.5
DO48760
0 years, female, NA, stage:2, alive, 690 days
6.5
DO45171
0 years, male, NA, stage:3, alive, 600 days
6.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
6.4
DO45219
0 years, male, NA, stage:2, alive, 1080 days
6.3
DO45127
0 years, male, NA, stage:3, dead, 420 days
6.3
DO45277
0 years, male, NA, stage:3, alive, 600 days
6.3
DO48712
0 years, male, NA, stage:2, alive, 810 days
6.3
DO23536
0 years, male, NA, stage:2, alive, 930 days
6.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
6.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
6.3
DO50845
0 years, male, NA, stage:3, alive, 210 days
6.2
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
6.1
DO50809
0 years, male, NA, stage:3, dead, 720 days
6.1
DO48747
0 years, male, NA, stage:3, alive, 540 days
6.1
DO23519
0 years, male, NA, stage:3, alive, 630 days
6.1
DO45217
0 years, female, NA, stage:3, dead, 270 days
6.1
DO45173
0 years, male, NA, stage:3, alive, 1170 days
6.1
DO50859
0 years, male, NA, stage:2, alive, 180 days
6.0
DO45105
0 years, male, NA, stage:1, alive, 1680 days
6.0
DO45165
0 years, male, NA, stage:2, alive, 690 days
6.0
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.0
DO48725
0 years, male, NA, stage:1, alive, 780 days
6.0
DO45211
0 years, male, NA, stage:3, alive, 240 days
6.0
DO48732
0 years, male, NA, stage:3, alive, 630 days
5.9
DO48730
0 years, female, NA, stage:2, alive, 630 days
5.9
DO45269
0 years, male, NA, stage:3, alive, 750 days
5.9
DO45153
0 years, female, NA, stage:2, alive, 1380 days
5.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
5.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
5.8
DO45253
0 years, male, NA, stage:2, alive, 870 days
5.7
DO45141
0 years, male, NA, stage:2, alive, 1320 days
5.7
DO48677
0 years, male, NA, stage:3, alive, 1140 days
5.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
5.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
5.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
5.6
DO48679
0 years, male, NA, stage:2, alive, 1200 days
5.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
5.6
DO50804
0 years, male, NA, stage:2, alive, 720 days
5.6
DO48682
0 years, female, NA, stage:3, dead, 120 days
5.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
5.5
DO23523
0 years, male, NA, stage:3, alive, 1080 days
5.5
DO48715
0 years, female, NA, stage:2, dead, 690 days
5.5
DO23546
0 years, male, NA, stage:2, alive, 1050 days
5.5
DO50787
0 years, male, NA, stage:3, alive, 480 days
5.5
DO48697
0 years, female, NA, stage:2, dead, 810 days
5.5
DO23538
0 years, male, NA, stage:2, alive, 450 days
5.4
DO23534
0 years, male, NA, stage:2, alive, 840 days
5.4
DO48672
0 years, male, NA, stage:2, alive, 450 days
5.4
DO23530
0 years, male, NA, stage:4, dead, 180 days
5.4
DO23510
0 years, female, NA, stage:2, alive, 870 days
5.3
DO45095
0 years, male, NA, stage:2, alive, 1620 days
5.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
5.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
5.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
5.3
DO48728
0 years, female, NA, stage:2, alive, 150 days
5.2
DO23527
0 years, male, NA, stage:1, alive, 1050 days
5.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
5.2
DO50817
0 years, male, NA, stage:2, alive, 390 days
5.2
DO50814
0 years, male, NA, stage:3, alive, 420 days
5.1
DO45229
0 years, male, NA, stage:1, alive, 990 days
5.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
5.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
5.1
DO50855
0 years, male, NA, stage:2, alive, 570 days
5.0
DO45091
0 years, male, NA, stage:2, dead, 1320 days
5.0
DO50811
0 years, male, NA, stage:1, alive, 450 days
5.0
DO45115
0 years, male, NA, stage:2, alive, 840 days
4.9
DO23540
0 years, male, NA, stage:1, alive, 750 days
4.8
DO50850
0 years, male, NA, stage:3, alive, 720 days
4.8
DO45223
0 years, male, NA, stage:4, alive, 1020 days
4.8
DO50800
0 years, male, NA, stage:2, alive, 510 days
4.8
DO23541
0 years, male, NA, stage:2, alive, 930 days
4.7
DO45099
0 years, male, NA, stage:3, alive, 1590 days
4.6
DO50807
0 years, male, NA, stage:1, alive, 540 days
4.6
DO45119
0 years, male, NA, stage:3, dead, 510 days
4.6
DO45201
0 years, male, NA, stage:1, alive, 900 days
4.5
DO45135
0 years, male, NA, stage:1, alive, 1410 days
4.5
DO48716
0 years, male, NA, stage:2, alive, 720 days
4.5
DO45289
0 years, female, NA, stage:3, alive, 360 days
4.5
DO45094
0 years, male, NA, stage:3, alive, 1650 days
4.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
4.5
DO45175
0 years, male, NA, stage:2, alive, 1140 days
4.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
4.4
DO45167
0 years, male, NA, stage:2, dead, 1440 days
4.4
DO50832
0 years, male, NA, stage:3, alive, 90 days
4.3
DO45297
0 years, female, NA, stage:4, dead, 1260 days
4.3
DO50789
0 years, female, NA, stage:2, alive, 570 days
4.2
DO48733
0 years, male, NA, stage:2, alive, 600 days
4.2
DO45233
0 years, male, NA, stage:3, alive, 900 days
4.1
DO45169
0 years, male, NA, stage:3, alive, 1350 days
4.0
DO23550
0 years, male, NA, stage:1, alive, 990 days
4.0
DO48742
0 years, male, NA, stage:2, alive, 600 days
3.9
DO45097
0 years, male, NA, stage:3, alive, 1620 days
3.9
DO45255
0 years, male, NA, stage:3, alive, 720 days
3.8
DO48759
0 years, male, NA, stage:3, alive, 720 days
3.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
3.7
DO45101
0 years, male, NA, stage:2, alive, 1680 days
3.7
DO50839
0 years, female, NA, stage:3, alive, 330 days
3.7
DO50803
0 years, female, NA, stage:1, alive, 540 days
3.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
3.6
DO48761
0 years, male, NA, stage:2, alive, 870 days
3.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
3.4
DO227643
0 years, male, NA, stage:2, alive, 1260 days
3.4
DO45215
0 years, male, NA, stage:2, alive, 1170 days
3.4
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.4
DO45111
0 years, male, NA, stage:2, alive, 1590 days
3.3
DO45261
0 years, male, NA, stage:3, alive, 990 days
3.2
DO45181
0 years, female, NA, stage:2, alive, 1200 days
3.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
3.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
3.0
DO23531
0 years, female, NA, stage:3, alive, 900 days
3.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
2.9
DO227801
0 years, female, NA, stage:1, alive, 660 days
2.9
DO50805
0 years, male, NA, stage:2, alive, 690 days
2.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
2.7
DO50808
0 years, male, NA, stage:2, alive, 570 days
2.6
DO45093
0 years, male, NA, stage:2, dead, 720 days
2.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.2
DO45109
0 years, male, NA, stage:2, alive, 1590 days
2.2
DO23517
0 years, male, NA, stage:2, alive, 1200 days
2.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
2.2
DO48674
0 years, male, NA, stage:2, alive, 1260 days
1.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
523
Tumor
1.7
1013
Tumor
1.7
957
Tumor
1.6
313
Tumor
1.3
131
Tumor
1.3
445
Tumor
1.2
743
Tumor
1.1
357
Tumor
1.1
411
Tumor
1.0
491
Tumor
1.0
1021
Tumor
1.0
125
Tumor
0.9
517
Tumor
0.8
277
Tumor
0.8
965
Tumor
0.8
147
Tumor
0.8
1031
Tumor
0.7
953
Tumor
0.7
647
Tumor
0.7
393
Tumor
0.7
923
Tumor
0.7
863
Tumor
0.7
271
Tumor
0.7
777
Tumor
0.6
123
Tumor
0.6
257
Tumor
0.6
497
Tumor
0.6
533
Tumor
0.6
463
Tumor
0.6
473
Tumor
0.6
283
Tumor
0.6
865
Tumor
0.6
1025
Tumor
0.6
951
Tumor
0.5
737
Tumor
0.5
351
Tumor
0.5
537
Tumor
0.5
447
Tumor
0.5
975
Tumor
0.5
573
Tumor
0.5
663
Tumor
0.5
921
Tumor
0.5
877
Tumor
0.5
665
Tumor
0.4
297
Tumor
0.4
1043
Tumor
0.4
331
Tumor
0.4
375
Tumor
0.4
343
Tumor
0.4
977
Tumor
0.4
527
Tumor
0.4
285
Tumor
0.4
724
Normal
0.4
413
Tumor
0.4
171
Tumor
0.4
385
Tumor
0.4
881
Tumor
0.3
435
Tumor
0.3
571
Tumor
0.3
963
Tumor
0.3
211
Tumor
0.3
355
Tumor
0.3
525
Tumor
0.3
231
Tumor
0.3
361
Tumor
0.3
727
Tumor
0.3
813
Tumor
0.3
191
Tumor
0.3
112
Tumor
0.3
635
Tumor
0.3
745
Tumor
0.3
161
Tumor
0.3
443
Tumor
0.3
213
Tumor
0.3
341
Tumor
0.3
943
Tumor
0.2
817
Tumor
0.2
465
Tumor
0.2
221
Tumor
0.2
483
Tumor
0.2
911
Tumor
0.2
471
Tumor
0.2
741
Tumor
0.2
915
Tumor
0.2
391
Tumor
0.2
967
Tumor
0.2
715
Tumor
0.2
615
Tumor
0.2
873
Tumor
0.2
185
Tumor
0.2
697
Tumor
0.1
431
Tumor
0.1
141
Tumor
0.1
545
Tumor
0.1
187
Tumor
0.1
227
Tumor
0.1
515
Tumor
0.1
661
Tumor
0.1
867
Tumor
0.1
553
Tumor
0.1
267
Tumor
0.1
135
Tumor
0.1
1027
Tumor
0.1
127
Tumor
0.1
481
Tumor
0.1
477
Tumor
0.1
983
Tumor
0.1
814
Normal
0.1
217
Tumor
0.1
487
Tumor
0.0
387
Tumor
0.0
641
Tumor
0.0
851
Tumor
0.0
815
Tumor
0.0
415
Tumor
0.0
685
Tumor
0.0
367
Tumor
0.0
883
Tumor
0.0
785
Tumor
0.0
861
Tumor
0.0
365
Tumor
0.0
857
Tumor
0.0
461
Tumor
0.0
671
Tumor
0.0
981
Tumor
0.0
557
Tumor
0.0
493
Tumor
0.0
713
Tumor
0.0
567
Tumor
0.0
327
Tumor
0.0
423
Tumor
0.0
436
Normal
-0.1
433
Tumor
-0.1
467
Tumor
-0.1
113
Tumor
-0.1
261
Tumor
-0.1
114
Normal
-0.1
695
Tumor
-0.1
421
Tumor
-0.1
432
Normal
-0.1
192
Normal
-0.1
823
Tumor
-0.1
137
Tumor
-0.1
366
Normal
-0.1
563
Tumor
-0.1
721
Tumor
-0.1
353
Tumor
-0.1
358
Normal
-0.1
314
Normal
-0.1
455
Tumor
-0.1
917
Tumor
-0.1
376
Normal
-0.1
354
Normal
-0.1
518
Normal
-0.2
195
Tumor
-0.2
298
Normal
-0.2
342
Normal
-0.2
272
Normal
-0.2
446
Normal
-0.2
311
Tumor
-0.2
755
Tumor
-0.2
232
Normal
-0.2
222
Normal
-0.2
955
Tumor
-0.2
926
Normal
-0.2
196
Normal
-0.2
451
Tumor
-0.2
128
Normal
-0.2
218
Normal
-0.2
627
Tumor
-0.2
742
Normal
-0.2
214
Normal
-0.2
362
Normal
-0.2
1045
Tumor
-0.2
258
Normal
-0.2
392
Normal
-0.2
352
Normal
-0.2
964
Normal
-0.2
262
Normal
-0.2
924
Normal
-0.2
617
Tumor
-0.2
1022
Normal
-0.2
386
Normal
-0.2
513
Tumor
-0.2
1041
Tumor
-0.2
482
Normal
-0.3
1014
Normal
-0.3
312
Normal
-0.3
484
Normal
-0.3
364
Normal
-0.3
744
Normal
-0.3
383
Tumor
-0.3
111
Normal
-0.3
425
Tumor
-0.3
516
Normal
-0.3
818
Normal
-0.3
416
Normal
-0.3
858
Normal
-0.3
786
Normal
-0.3
186
Normal
-0.3
723
Tumor
-0.3
145
Tumor
-0.3
568
Normal
-0.3
223
Tumor
-0.3
618
Normal
-0.3
464
Normal
-0.3
434
Normal
-0.3
913
Tumor
-0.3
388
Normal
-0.3
862
Normal
-0.3
456
Normal
-0.3
514
Normal
-0.3
642
Normal
-0.3
526
Normal
-0.3
978
Normal
-0.3
344
Normal
-0.3
444
Normal
-0.3
824
Normal
-0.3
756
Normal
-0.3
368
Normal
-0.3
126
Normal
-0.3
332
Normal
-0.3
968
Normal
-0.3
1046
Normal
-0.3
746
Normal
-0.3
956
Normal
-0.3
452
Normal
-0.3
925
Tumor
-0.3
228
Normal
-0.3
426
Normal
-0.3
472
Normal
-0.3
528
Normal
-0.3
1015
Tumor
-0.3
414
Normal
-0.3
466
Normal
-0.3
616
Normal
-0.3
648
Normal
-0.3
268
Normal
-0.3
696
Normal
-0.3
124
Normal
-0.3
148
Normal
-0.3
172
Normal
-0.3
966
Normal
-0.3
394
Normal
-0.3
278
Normal
-0.3
162
Normal
-0.3
136
Normal
-0.3
1016
Normal
-0.3
384
Normal
-0.3
448
Normal
-0.3
132
Normal
-0.3
866
Normal
-0.3
356
Normal
-0.3
738
Normal
-0.3
1044
Normal
-0.3
462
Normal
-0.3
284
Normal
-0.3
952
Normal
-0.3
328
Normal
-0.3
534
Normal
-0.3
982
Normal
-0.3
546
Normal
-0.3
698
Normal
-0.3
488
Normal
-0.3
224
Normal
-0.3
884
Normal
-0.3
524
Normal
-0.3
428
Normal
-0.3
498
Normal
-0.3
286
Normal
-0.3
412
Normal
-0.3
628
Normal
-0.3
944
Normal
-0.3
976
Normal
-0.4
728
Normal
-0.4
664
Normal
-0.4
918
Normal
-0.4
937
Tumor
-0.4
422
Normal
-0.4
427
Tumor
-0.4
914
Normal
-0.4
916
Normal
-0.4
468
Normal
-0.4
662
Normal
-0.4
146
Normal
-0.4
564
Normal
-0.4
922
Normal
-0.4
778
Normal
-0.4
1042
Normal
-0.4
474
Normal
-0.4
716
Normal
-0.4
868
Normal
-0.4
954
Normal
-0.4
535
Tumor
-0.4
984
Normal
-0.4
912
Normal
-0.4
188
Normal
-0.4
363
Tumor
-0.4
1026
Normal
-0.4
714
Normal
-0.4
212
Normal
-0.4
396
Normal
-0.4
554
Normal
-0.4
938
Normal
-0.4
424
Normal
-0.4
142
Normal
-0.4
536
Normal
-0.4
138
Normal
-0.4
1032
Normal
-0.4
864
Normal
-0.4
874
Normal
-0.4
958
Normal
-0.4
722
Normal
-0.4
816
Normal
-0.4
574
Normal
-0.4
636
Normal
-0.4
478
Normal
-0.4
492
Normal
-0.4
558
Normal
-0.4
666
Normal
-0.4
494
Normal
-0.5
1028
Normal
-0.5
672
Normal
-0.5
882
Normal
-0.5
572
Normal
-0.5
852
Normal
-0.5
878
Normal
-0.5
686
Normal
-0.5
538
Normal
-0.6
395
Tumor
-0.7
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.