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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GFPT1 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
12.5
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
91.0
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
79.3
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
75.5
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
46.8
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
45.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
45.0
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
45.0
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
43.5
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
42.8
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
33.1
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
32.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
30.7
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
30.2
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
29.5
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
28.8
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
28.7
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
27.3
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
27.1
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
26.9
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
26.7
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
26.5
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
26.3
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
26.3
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
26.0
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
25.5
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
24.8
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
24.7
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
24.6
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
24.1
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
24.1
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
23.9
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
23.7
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
23.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
23.4
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
23.3
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
23.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
23.0
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
22.8
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
22.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
22.7
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
22.7
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
22.5
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
22.4
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
21.9
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
21.6
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
21.4
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
21.3
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
21.2
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
21.1
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
20.9
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
20.7
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
20.4
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
19.9
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
19.9
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
19.8
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
19.6
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
19.6
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
19.5
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
19.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
19.2
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
19.1
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
18.9
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
18.7
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
18.7
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
18.6
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
18.6
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
18.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
18.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
18.0
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
17.9
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
17.9
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
17.8
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
17.7
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
17.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
17.2
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
17.1
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
16.9
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
16.8
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
16.7
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
16.6
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
16.6
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
16.4
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
16.4
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
16.4
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
16.3
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
16.3
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
16.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
16.0
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
16.0
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
16.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
15.9
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
15.8
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
15.6
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
15.6
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
15.6
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
15.5
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
15.5
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
15.5
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
15.4
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
15.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
15.4
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
15.2
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
15.1
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
14.9
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
14.7
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
14.6
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
14.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
14.5
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
14.3
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
14.0
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
14.0
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
13.9
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
13.9
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
13.9
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
13.8
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
13.8
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
13.6
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
13.4
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
13.4
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
13.4
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
13.4
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
13.3
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
13.2
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
13.2
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
13.1
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
13.1
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
12.9
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
12.8
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
12.8
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
12.8
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
12.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
12.6
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
12.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
12.5
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
12.4
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
12.4
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
12.4
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
12.4
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
12.3
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
12.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
12.2
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
12.2
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
12.2
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
12.2
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
12.1
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
12.1
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
12.0
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
12.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
12.0
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
11.9
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
11.8
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
11.8
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
11.8
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
11.8
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
11.7
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
11.6
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
11.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
11.6
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
11.5
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
11.5
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
11.5
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
11.5
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
11.4
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
11.3
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
11.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
11.2
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
11.2
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
11.2
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
11.2
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
11.1
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
11.0
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
10.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
10.8
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
10.7
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
10.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
10.6
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
10.6
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
10.5
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
10.5
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
10.4
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
10.3
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
10.3
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
10.2
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
10.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
10.2
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
10.0
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
10.0
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
10.0
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
9.9
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
9.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
9.9
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
9.9
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
9.7
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
9.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
9.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
9.6
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
9.6
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
9.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
9.5
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
9.3
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
9.3
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
9.2
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
9.2
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
9.2
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
9.1
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
9.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
9.0
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
9.0
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
8.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
8.9
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
8.8
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
8.6
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
8.6
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
8.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
8.5
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
8.5
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
8.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
8.3
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
8.3
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
8.3
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
8.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
8.3
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
8.2
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
8.1
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
8.1
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
8.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
8.1
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
8.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
8.1
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
8.0
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
8.0
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
8.0
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
7.9
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
7.9
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
7.9
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
7.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
7.8
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
7.6
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
7.6
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
7.6
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
7.5
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
7.5
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
7.4
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
7.4
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
7.4
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
7.4
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
7.3
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
7.3
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
7.1
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
7.1
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
6.9
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
6.9
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
6.8
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
6.8
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
6.8
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
6.8
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
6.8
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
6.7
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
6.7
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
6.7
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
6.7
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.6
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
6.6
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
6.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
6.5
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
6.5
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
6.4
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
6.4
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
6.4
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
6.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
6.3
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
6.3
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
6.2
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
6.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
6.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
6.0
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
6.0
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
6.0
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
5.9
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
5.9
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
5.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
5.8
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
5.8
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
5.8
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
5.7
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
5.7
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
5.7
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
5.7
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
5.7
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
5.7
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
5.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
5.6
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
5.5
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
5.4
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
5.4
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
5.4
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
5.4
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
5.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
5.3
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
5.3
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
5.2
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
5.2
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
5.2
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
5.1
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
5.0
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
5.0
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
5.0
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
4.9
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
4.9
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
4.8
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
4.8
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
4.8
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
4.7
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
4.7
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
4.7
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
4.7
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
4.6
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
4.6
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
4.5
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
4.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
4.5
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
4.4
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
4.4
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
4.3
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
4.3
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
4.3
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
4.2
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
4.0
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
3.9
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
3.8
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
3.8
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
3.8
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
3.7
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
3.5
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
3.3
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
3.2
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
3.2
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
3.2
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
3.1
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
3.0
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
3.0
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
2.9
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
2.9
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
2.6
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
2.6
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
2.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
2.6
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
2.6
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
2.5
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
2.1
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
2.1
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
2.1
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
2.1
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
2.0
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1.9
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
1.9
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
1.9
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
1.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
1.7
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
1.6
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
1.6
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
GFPT1 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
9.6
Number of samples
231
Samples
Sample
Description
TPM
DO45245
0 years, female, NA, stage:2, dead, 240 days
34.9
DO45205
0 years, female, NA, stage:2, dead, 90 days
30.5
DO45145
0 years, male, NA, stage:3, dead, 60 days
29.8
DO45119
0 years, male, NA, stage:3, dead, 510 days
28.5
DO23521
0 years, male, NA, stage:3, alive, 1110 days
28.0
DO50815
0 years, male, NA, stage:3, alive, 150 days
24.6
DO45299
0 years, female, NA, stage:1, alive, 1440 days
24.4
DO48717
0 years, male, NA, stage:4, dead, 180 days
24.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
23.3
DO50829
0 years, male, NA, stage:3, alive, 570 days
22.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
21.4
DO45279
0 years, male, NA, stage:3, alive, 1290 days
20.9
DO45155
0 years, male, NA, stage:2, alive, 2160 days
20.9
DO45303
0 years, female, NA, stage:3, alive, 990 days
20.3
DO23510
0 years, female, NA, stage:2, alive, 870 days
20.0
DO45263
0 years, male, NA, stage:3, dead, 270 days
19.9
DO45275
0 years, male, NA, stage:3, dead, 10 days
18.2
DO45239
0 years, male, NA, stage:2, alive, 870 days
18.1
DO45127
0 years, male, NA, stage:3, dead, 420 days
17.8
DO48701
0 years, male, NA, stage:2, alive, 780 days
17.2
DO45091
0 years, male, NA, stage:2, dead, 1320 days
16.7
DO45213
0 years, male, NA, stage:1, alive, 1200 days
16.0
DO48730
0 years, female, NA, stage:2, alive, 630 days
16.0
DO45191
0 years, female, NA, stage:2, alive, 1200 days
15.4
DO45237
0 years, male, NA, stage:2, alive, 900 days
15.3
DO45092
0 years, male, NA, stage:4, dead, 1200 days
15.0
DO45233
0 years, male, NA, stage:3, alive, 900 days
14.7
DO45125
0 years, male, NA, stage:3, alive, 1680 days
14.6
DO45301
0 years, male, NA, stage:2, dead, 1440 days
14.6
DO45121
0 years, male, NA, stage:3, alive, 1530 days
14.6
DO45257
0 years, male, NA, stage:3, alive, 810 days
14.5
DO45203
0 years, female, NA, stage:2, alive, 1170 days
14.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
13.9
DO48720
0 years, female, NA, stage:2, alive, 570 days
13.8
DO45287
0 years, male, NA, stage:1, alive, 390 days
13.8
DO45173
0 years, male, NA, stage:3, alive, 1170 days
13.8
DO45131
0 years, male, NA, stage:4, dead, 360 days
13.7
DO23524
0 years, female, NA, stage:2, alive, 1050 days
13.7
DO45209
0 years, male, NA, stage:4, alive, 1350 days
13.6
DO45223
0 years, male, NA, stage:4, alive, 1020 days
13.6
DO45137
0 years, male, NA, stage:1, alive, 1320 days
13.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
13.5
DO45217
0 years, female, NA, stage:3, dead, 270 days
13.3
DO45153
0 years, female, NA, stage:2, alive, 1380 days
13.3
DO45243
0 years, female, NA, stage:3, alive, 930 days
13.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
13.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
13.1
DO45123
0 years, female, NA, stage:2, dead, 570 days
13.1
DO23526
0 years, male, NA, stage:3, alive, 1050 days
13.0
DO45231
0 years, male, NA, stage:2, alive, 930 days
12.8
DO45157
0 years, male, NA, stage:2, alive, 1980 days
12.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
12.6
DO45113
0 years, male, NA, stage:3, alive, 1560 days
12.6
DO48733
0 years, male, NA, stage:2, alive, 600 days
12.6
DO45227
0 years, female, NA, stage:2, alive, 1020 days
12.5
DO45159
0 years, male, NA, stage:3, alive, 1470 days
12.4
DO45165
0 years, male, NA, stage:2, alive, 690 days
12.4
DO23552
0 years, female, NA, stage:1, alive, 810 days
12.3
DO48704
0 years, female, NA, stage:3, alive, 750 days
12.1
DO45269
0 years, male, NA, stage:3, alive, 750 days
12.0
DO50774
0 years, female, NA, stage:2, alive, 720 days
12.0
DO45139
0 years, male, NA, stage:3, alive, 1320 days
11.8
DO45251
0 years, female, NA, stage:2, alive, 900 days
11.5
DO48743
0 years, female, NA, stage:2, alive, 570 days
11.3
DO45096
0 years, male, NA, stage:2, dead, 1290 days
11.2
DO45273
0 years, male, NA, stage:2, alive, 480 days
11.0
DO50806
0 years, male, NA, stage:4, alive, 540 days
11.0
DO45117
0 years, female, NA, stage:2, dead, 1110 days
10.8
DO45219
0 years, male, NA, stage:2, alive, 1080 days
10.6
DO50850
0 years, male, NA, stage:3, alive, 720 days
10.6
DO45283
0 years, male, NA, stage:3, alive, 510 days
10.5
DO50840
0 years, male, NA, stage:2, alive, 330 days
10.5
DO45249
0 years, male, NA, stage:1, alive, 630 days
10.4
DO48725
0 years, male, NA, stage:1, alive, 780 days
10.1
DO45267
0 years, male, NA, stage:3, dead, 570 days
10.1
DO50799
0 years, female, NA, stage:2, alive, 540 days
10.0
DO48697
0 years, female, NA, stage:2, dead, 810 days
10.0
DO45225
0 years, male, NA, stage:1, alive, 1050 days
9.9
DO45183
0 years, female, NA, stage:2, dead, 570 days
9.9
DO45135
0 years, male, NA, stage:1, alive, 1410 days
9.9
DO45099
0 years, male, NA, stage:3, alive, 1590 days
9.8
DO48700
0 years, female, NA, stage:2, alive, 810 days
9.7
DO23535
0 years, male, NA, stage:1, alive, 960 days
9.7
DO23509
0 years, male, NA, stage:3, dead, 780 days
9.7
DO48760
0 years, female, NA, stage:2, alive, 690 days
9.6
DO50803
0 years, female, NA, stage:1, alive, 540 days
9.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
9.6
DO45161
0 years, male, NA, stage:2, dead, 540 days
9.4
DO23512
0 years, male, NA, stage:1, alive, 1260 days
9.4
DO45265
0 years, male, NA, stage:3, alive, 1020 days
9.4
DO45103
0 years, male, NA, stage:3, alive, 450 days
9.4
DO45177
0 years, female, NA, stage:3, alive, 1260 days
9.3
DO50811
0 years, male, NA, stage:1, alive, 450 days
9.2
DO50844
0 years, male, NA, stage:4, alive, 300 days
9.1
DO23540
0 years, male, NA, stage:1, alive, 750 days
9.1
DO45189
0 years, female, NA, stage:2, alive, 1200 days
9.1
DO50800
0 years, male, NA, stage:2, alive, 510 days
9.0
DO45107
0 years, female, NA, stage:2, alive, 1710 days
9.0
DO48727
0 years, female, NA, stage:2, dead, 390 days
8.9
DO48757
0 years, female, NA, stage:3, alive, 480 days
8.8
DO45221
0 years, female, NA, stage:4, dead, 390 days
8.8
DO50845
0 years, male, NA, stage:3, alive, 210 days
8.8
DO48761
0 years, male, NA, stage:2, alive, 870 days
8.7
DO45259
0 years, male, NA, stage:3, alive, 330 days
8.7
DO48746
0 years, male, NA, stage:3, alive, 570 days
8.7
DO50832
0 years, male, NA, stage:3, alive, 90 days
8.7
DO50793
0 years, male, NA, stage:4, alive, 540 days
8.7
DO48723
0 years, male, NA, stage:1, alive, 600 days
8.7
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.6
DO23518
0 years, male, NA, stage:2, alive, 1320 days
8.6
DO23537
0 years, male, NA, stage:2, dead, 900 days
8.6
DO45207
0 years, male, NA, stage:1, alive, 1050 days
8.6
DO45307
0 years, female, NA, stage:4, dead, 240 days
8.6
DO45115
0 years, male, NA, stage:2, alive, 840 days
8.5
DO45169
0 years, male, NA, stage:3, alive, 1350 days
8.4
DO23549
0 years, male, NA, stage:3, alive, 990 days
8.3
DO50822
0 years, male, NA, stage:2, alive, 510 days
8.3
DO23515
0 years, male, NA, stage:2, alive, 1230 days
8.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
8.2
DO23551
0 years, male, NA, stage:3, dead, 150 days
8.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
8.1
DO48716
0 years, male, NA, stage:2, alive, 720 days
8.0
DO48682
0 years, female, NA, stage:3, dead, 120 days
8.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
7.9
DO48719
0 years, male, NA, stage:2, alive, 690 days
7.9
DO23519
0 years, male, NA, stage:3, alive, 630 days
7.8
DO45143
0 years, male, NA, stage:3, alive, 1290 days
7.8
DO45281
0 years, male, NA, stage:4, alive, 750 days
7.7
DO50820
0 years, female, NA, stage:3, alive, 510 days
7.7
DO50785
0 years, male, NA, stage:4, dead, 90 days
7.6
DO48737
0 years, male, NA, stage:1, alive, 720 days
7.6
DO45199
0 years, female, NA, stage:2, alive, 1350 days
7.6
DO50819
0 years, female, NA, stage:2, alive, 510 days
7.6
DO45253
0 years, male, NA, stage:2, alive, 870 days
7.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
7.5
DO45187
0 years, female, NA, stage:1, alive, 1260 days
7.5
DO50804
0 years, male, NA, stage:2, alive, 720 days
7.3
DO23541
0 years, male, NA, stage:2, alive, 930 days
7.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
7.3
DO50807
0 years, male, NA, stage:1, alive, 540 days
7.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
7.2
DO227801
0 years, female, NA, stage:1, alive, 660 days
7.2
DO45093
0 years, male, NA, stage:2, dead, 720 days
7.2
DO23547
0 years, male, NA, stage:1, alive, 1020 days
7.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
7.1
DO48712
0 years, male, NA, stage:2, alive, 810 days
7.1
DO48732
0 years, male, NA, stage:3, alive, 630 days
7.1
DO227643
0 years, male, NA, stage:2, alive, 1260 days
7.0
DO45305
0 years, male, NA, stage:4, alive, 300 days
7.0
DO50791
0 years, female, NA, stage:1, dead, 480 days
6.9
DO23544
0 years, male, NA, stage:2, alive, 960 days
6.9
DO23529
0 years, male, NA, stage:4, alive, 930 days
6.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
6.8
DO45179
0 years, female, NA, stage:2, alive, 600 days
6.7
DO23523
0 years, male, NA, stage:3, alive, 1080 days
6.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
6.6
DO50805
0 years, male, NA, stage:2, alive, 690 days
6.6
DO23514
0 years, male, NA, stage:2, alive, 1290 days
6.6
DO23530
0 years, male, NA, stage:4, dead, 180 days
6.6
DO48672
0 years, male, NA, stage:2, alive, 450 days
6.5
DO45261
0 years, male, NA, stage:3, alive, 990 days
6.5
DO50789
0 years, female, NA, stage:2, alive, 570 days
6.5
DO45095
0 years, male, NA, stage:2, alive, 1620 days
6.3
DO45101
0 years, male, NA, stage:2, alive, 1680 days
6.3
DO50783
0 years, male, NA, stage:3, alive, 480 days
6.3
DO45241
0 years, male, NA, stage:1, alive, 1080 days
6.3
DO50857
0 years, male, NA, stage:2, alive, 210 days
6.2
DO45235
0 years, female, NA, stage:1, alive, 900 days
6.2
DO23538
0 years, male, NA, stage:2, alive, 450 days
6.2
DO45097
0 years, male, NA, stage:3, alive, 1620 days
6.2
DO23542
0 years, male, NA, stage:3, alive, 960 days
6.1
DO45094
0 years, male, NA, stage:3, alive, 1650 days
6.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
6.0
DO45289
0 years, female, NA, stage:3, alive, 360 days
6.0
DO50776
0 years, male, NA, stage:1, alive, 690 days
6.0
DO23539
0 years, male, NA, stage:1, alive, 1110 days
6.0
DO48721
0 years, female, NA, stage:1, alive, 900 days
5.9
DO45141
0 years, male, NA, stage:2, alive, 1320 days
5.9
DO45149
0 years, female, NA, stage:2, alive, 1260 days
5.9
DO23550
0 years, male, NA, stage:1, alive, 990 days
5.8
DO50813
0 years, male, NA, stage:2, alive, 420 days
5.7
DO23545
0 years, male, NA, stage:2, dead, 570 days
5.7
DO23516
0 years, male, NA, stage:3, dead, 20 days
5.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
5.6
DO48681
0 years, male, NA, stage:2, alive, 900 days
5.5
DO45167
0 years, male, NA, stage:2, dead, 1440 days
5.5
DO45181
0 years, female, NA, stage:2, alive, 1200 days
5.4
DO23543
0 years, male, NA, stage:2, alive, 1020 days
5.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
5.4
DO23531
0 years, female, NA, stage:3, alive, 900 days
5.4
DO50802
0 years, male, NA, stage:2, alive, 930 days
5.3
DO50859
0 years, male, NA, stage:2, alive, 180 days
5.3
DO48751
0 years, male, NA, stage:2, dead, 480 days
5.3
DO23546
0 years, male, NA, stage:2, alive, 1050 days
5.2
DO45129
0 years, male, NA, stage:3, alive, 1470 days
5.2
DO23511
0 years, female, NA, stage:3, dead, 180 days
5.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
5.0
DO45255
0 years, male, NA, stage:3, alive, 720 days
5.0
DO45175
0 years, male, NA, stage:2, alive, 1140 days
5.0
DO23508
0 years, female, NA, stage:2, alive, 390 days
4.8
DO50787
0 years, male, NA, stage:3, alive, 480 days
4.7
DO23528
0 years, female, NA, stage:2, alive, 1020 days
4.6
DO45195
0 years, male, NA, stage:1, alive, 390 days
4.6
DO48747
0 years, male, NA, stage:3, alive, 540 days
4.5
DO50809
0 years, male, NA, stage:3, dead, 720 days
4.5
DO45109
0 years, male, NA, stage:2, alive, 1590 days
4.4
DO23525
0 years, male, NA, stage:4, alive, 1050 days
4.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
4.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
4.2
DO48677
0 years, male, NA, stage:3, alive, 1140 days
4.2
DO45211
0 years, male, NA, stage:3, alive, 240 days
4.2
DO48695
0 years, male, NA, stage:2, alive, 720 days
4.2
DO48706
0 years, male, NA, stage:2, alive, 870 days
4.2
DO45163
0 years, male, NA, stage:2, alive, 960 days
4.1
DO45171
0 years, male, NA, stage:3, alive, 600 days
4.1
DO23533
0 years, male, NA, stage:2, alive, 900 days
4.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
4.0
DO23536
0 years, male, NA, stage:2, alive, 930 days
4.0
DO23532
0 years, female, NA, stage:1, alive, 960 days
3.9
DO48742
0 years, male, NA, stage:2, alive, 600 days
3.9
DO23534
0 years, male, NA, stage:2, alive, 840 days
3.7
DO48693
0 years, male, NA, stage:2, alive, 900 days
3.7
DO48759
0 years, male, NA, stage:3, alive, 720 days
3.6
DO45133
0 years, male, NA, stage:3, dead, 660 days
3.5
DO50798
0 years, male, NA, stage:3, dead, 30 days
3.5
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.2
DO50818
0 years, male, NA, stage:2, alive, 510 days
2.8
DO50839
0 years, female, NA, stage:3, alive, 330 days
2.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
2.6
DO50814
0 years, male, NA, stage:3, alive, 420 days
2.2
DO50816
0 years, male, NA, stage:2, alive, 390 days
1.8
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
147
Tumor
1.4
617
Tumor
1.2
813
Tumor
1.2
327
Tumor
1.1
745
Tumor
1.0
527
Tumor
0.9
1021
Tumor
0.9
727
Tumor
0.9
567
Tumor
0.9
863
Tumor
0.8
951
Tumor
0.8
113
Tumor
0.7
983
Tumor
0.7
1027
Tumor
0.7
395
Tumor
0.7
145
Tumor
0.7
135
Tumor
0.6
573
Tumor
0.6
537
Tumor
0.6
737
Tumor
0.6
814
Normal
0.6
697
Tumor
0.6
1015
Tumor
0.6
925
Tumor
0.6
413
Tumor
0.6
285
Tumor
0.6
857
Tumor
0.6
721
Tumor
0.6
873
Tumor
0.6
191
Tumor
0.6
957
Tumor
0.5
724
Normal
0.5
427
Tumor
0.5
223
Tumor
0.5
367
Tumor
0.5
525
Tumor
0.5
218
Normal
0.5
467
Tumor
0.5
195
Tumor
0.5
685
Tumor
0.4
297
Tumor
0.4
955
Tumor
0.4
271
Tumor
0.4
415
Tumor
0.4
937
Tumor
0.4
341
Tumor
0.4
778
Normal
0.4
311
Tumor
0.4
923
Tumor
0.4
917
Tumor
0.4
557
Tumor
0.4
283
Tumor
0.4
517
Tumor
0.4
351
Tumor
0.3
1025
Tumor
0.3
851
Tumor
0.3
1026
Normal
0.3
713
Tumor
0.3
723
Tumor
0.3
451
Tumor
0.3
865
Tumor
0.3
446
Normal
0.3
463
Tumor
0.3
952
Normal
0.3
663
Tumor
0.3
125
Tumor
0.3
387
Tumor
0.3
186
Normal
0.2
141
Tumor
0.2
497
Tumor
0.2
965
Tumor
0.2
777
Tumor
0.2
967
Tumor
0.2
353
Tumor
0.2
545
Tumor
0.2
375
Tumor
0.2
421
Tumor
0.2
455
Tumor
0.2
376
Normal
0.2
665
Tumor
0.2
528
Normal
0.2
392
Normal
0.2
456
Normal
0.2
383
Tumor
0.2
1045
Tumor
0.2
743
Tumor
0.2
443
Tumor
0.2
286
Normal
0.2
481
Tumor
0.1
647
Tumor
0.1
146
Normal
0.1
943
Tumor
0.1
425
Tumor
0.1
217
Tumor
0.1
368
Normal
0.1
664
Normal
0.1
535
Tumor
0.1
823
Tumor
0.1
112
Tumor
0.1
416
Normal
0.1
385
Tumor
0.1
493
Tumor
0.1
257
Tumor
0.1
966
Normal
0.1
386
Normal
0.1
728
Normal
0.1
432
Normal
0.1
426
Normal
0.1
536
Normal
0.1
344
Normal
0.1
755
Tumor
0.1
1044
Normal
0.1
434
Normal
0.1
716
Normal
0.1
926
Normal
0.1
187
Tumor
0.1
672
Normal
0.1
746
Normal
0.1
111
Normal
0.1
436
Normal
0.1
696
Normal
0.1
661
Tumor
0.1
666
Normal
0.1
862
Normal
0.1
298
Normal
0.1
221
Tumor
0.1
554
Normal
0.1
214
Normal
0.1
756
Normal
0.1
124
Normal
0.1
956
Normal
0.1
352
Normal
0.0
635
Tumor
0.0
572
Normal
0.0
916
Normal
0.0
568
Normal
0.0
414
Normal
0.0
524
Normal
0.0
332
Normal
0.0
188
Normal
0.0
722
Normal
0.0
391
Tumor
0.0
262
Normal
0.0
944
Normal
0.0
136
Normal
0.0
358
Normal
0.0
131
Tumor
0.0
563
Tumor
0.0
354
Normal
0.0
883
Tumor
0.0
1016
Normal
0.0
148
Normal
0.0
435
Tumor
0.0
786
Normal
0.0
1031
Tumor
0.0
228
Normal
0.0
171
Tumor
0.0
466
Normal
0.0
1022
Normal
0.0
213
Tumor
0.0
488
Normal
0.0
553
Tumor
0.0
468
Normal
0.0
312
Normal
0.0
1043
Tumor
0.0
714
Normal
0.0
738
Normal
0.0
464
Normal
0.0
984
Normal
0.0
422
Normal
0.0
394
Normal
0.0
924
Normal
-0.1
196
Normal
-0.1
126
Normal
-0.1
981
Tumor
-0.1
142
Normal
-0.1
114
Normal
-0.1
968
Normal
-0.1
546
Normal
-0.1
477
Tumor
-0.1
211
Tumor
-0.1
858
Normal
-0.1
742
Normal
-0.1
222
Normal
-0.1
424
Normal
-0.1
1014
Normal
-0.1
412
Normal
-0.1
272
Normal
-0.1
662
Normal
-0.1
514
Normal
-0.1
212
Normal
-0.1
471
Tumor
-0.1
267
Tumor
-0.1
963
Tumor
-0.1
452
Normal
-0.1
278
Normal
-0.1
314
Normal
-0.1
558
Normal
-0.1
482
Normal
-0.1
362
Normal
-0.1
518
Normal
-0.1
642
Normal
-0.1
384
Normal
-0.1
574
Normal
-0.1
698
Normal
-0.1
884
Normal
-0.1
162
Normal
-0.1
342
Normal
-0.1
361
Tumor
-0.1
483
Tumor
-0.1
137
Tumor
-0.1
616
Normal
-0.1
393
Tumor
-0.1
284
Normal
-0.1
818
Normal
-0.1
161
Tumor
-0.1
964
Normal
-0.1
982
Normal
-0.1
494
Normal
-0.1
364
Normal
-0.1
433
Tumor
-0.1
428
Normal
-0.1
817
Tumor
-0.1
918
Normal
-0.1
628
Normal
-0.1
636
Normal
-0.1
618
Normal
-0.1
132
Normal
-0.1
958
Normal
-0.2
1013
Tumor
-0.2
1042
Normal
-0.2
513
Tumor
-0.2
852
Normal
-0.2
824
Normal
-0.2
516
Normal
-0.2
232
Normal
-0.2
396
Normal
-0.2
744
Normal
-0.2
447
Tumor
-0.2
571
Tumor
-0.2
172
Normal
-0.2
978
Normal
-0.2
938
Normal
-0.2
258
Normal
-0.2
448
Normal
-0.2
912
Normal
-0.2
1046
Normal
-0.2
123
Tumor
-0.2
526
Normal
-0.2
224
Normal
-0.2
474
Normal
-0.2
185
Tumor
-0.2
1028
Normal
-0.2
138
Normal
-0.2
816
Normal
-0.2
866
Normal
-0.2
534
Normal
-0.2
864
Normal
-0.2
975
Tumor
-0.2
313
Tumor
-0.2
977
Tumor
-0.2
328
Normal
-0.2
564
Normal
-0.2
268
Normal
-0.2
868
Normal
-0.2
515
Tumor
-0.2
498
Normal
-0.2
976
Normal
-0.2
922
Normal
-0.2
874
Normal
-0.2
648
Normal
-0.2
331
Tumor
-0.2
192
Normal
-0.3
356
Normal
-0.3
465
Tumor
-0.3
461
Tumor
-0.3
1032
Normal
-0.3
431
Tumor
-0.3
686
Normal
-0.3
128
Normal
-0.3
388
Normal
-0.3
914
Normal
-0.3
492
Normal
-0.3
921
Tumor
-0.3
484
Normal
-0.3
445
Tumor
-0.3
877
Tumor
-0.3
472
Normal
-0.3
366
Normal
-0.3
538
Normal
-0.3
444
Normal
-0.3
523
Tumor
-0.3
355
Tumor
-0.3
533
Tumor
-0.3
343
Tumor
-0.3
357
Tumor
-0.3
878
Normal
-0.3
478
Normal
-0.3
882
Normal
-0.3
491
Tumor
-0.4
277
Tumor
-0.4
363
Tumor
-0.4
671
Tumor
-0.4
462
Normal
-0.4
954
Normal
-0.4
641
Tumor
-0.4
411
Tumor
-0.4
953
Tumor
-0.5
227
Tumor
-0.5
487
Tumor
-0.5
861
Tumor
-0.5
881
Tumor
-0.5
127
Tumor
-0.5
913
Tumor
-0.5
741
Tumor
-0.6
915
Tumor
-0.6
365
Tumor
-0.6
473
Tumor
-0.6
1041
Tumor
-0.6
911
Tumor
-0.7
261
Tumor
-0.7
231
Tumor
-0.7
715
Tumor
-0.8
695
Tumor
-0.8
627
Tumor
-0.8
423
Tumor
-0.8
815
Tumor
-0.9
785
Tumor
-0.9
867
Tumor
-0.9
615
Tumor
-0.9
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LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.