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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TFDP1 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
13.9
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
39.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
36.1
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
30.9
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
28.0
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
27.1
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
25.3
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
24.6
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
23.0
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
22.9
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
22.8
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
20.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
19.0
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
18.9
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
18.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
18.2
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
17.5
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
17.2
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
16.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
16.4
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
15.2
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
15.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
14.9
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
13.9
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
13.7
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
13.4
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
13.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
13.1
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
12.7
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
12.4
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
12.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
12.2
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
12.2
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
12.1
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
12.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
11.9
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
11.9
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
11.7
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.6
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
11.5
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
11.2
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
10.6
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
10.4
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
10.1
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
10.0
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
9.7
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
9.6
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
9.2
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
9.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
8.6
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
8.2
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
8.2
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
7.7
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
7.6
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
7.6
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
7.0
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
6.8
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
6.1
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
6.0
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
6.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
5.9
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
5.8
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
5.2
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
4.5
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TFDP1 is potential prognostic, high expression is favorable in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
23.3
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
49.6
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
49.1
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
48.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
47.4
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
47.0
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
46.3
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
46.0
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
45.5
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
45.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
45.2
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
45.0
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
44.1
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
43.0
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
42.7
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
42.6
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
42.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
41.0
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
40.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
40.7
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
40.7
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
40.4
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
40.1
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
39.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
39.6
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
39.4
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
39.4
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
39.3
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
38.9
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
38.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
38.3
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
38.2
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
38.2
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
38.1
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
37.7
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
37.7
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
37.6
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
37.6
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
37.4
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
37.4
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
37.3
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
37.2
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
36.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
36.7
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
36.6
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
35.9
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
35.7
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
35.6
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
35.1
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
35.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
34.9
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
34.8
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
34.8
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
34.6
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
34.6
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
34.5
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
34.5
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
34.4
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
34.4
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
34.3
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
34.3
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
34.3
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
34.2
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
34.2
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
34.2
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
33.9
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
33.9
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
33.8
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
33.8
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
33.8
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
33.5
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
33.4
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
33.4
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
33.4
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
33.3
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
33.3
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
33.3
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
33.2
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
33.1
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
33.1
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
33.0
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
32.9
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
32.8
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
32.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
32.5
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
32.4
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
32.4
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
32.2
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
32.2
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
32.2
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
32.0
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
32.0
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
31.9
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
31.9
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
31.9
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
31.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
31.7
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
31.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
31.5
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
31.5
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
31.3
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
31.2
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
31.2
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
31.1
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
31.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
31.1
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
31.1
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
31.1
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
31.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
31.0
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
31.0
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
30.9
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
30.9
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
30.9
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
30.9
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
30.8
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
30.8
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
30.8
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
30.7
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
30.7
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
30.6
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
30.6
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
30.6
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
30.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
30.4
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
30.3
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
30.1
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
30.0
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
30.0
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
30.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
29.8
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
29.7
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
29.6
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
29.4
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
29.4
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
29.4
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
29.4
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
29.4
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
29.3
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
29.3
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
29.2
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
29.1
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
29.0
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
29.0
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
29.0
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
28.9
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
28.9
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
28.9
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
28.8
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
28.8
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
28.8
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
28.7
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
28.6
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
28.5
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
28.5
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
28.4
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
28.4
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
28.3
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
28.2
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
28.2
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
28.1
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
28.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
28.1
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
28.0
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
28.0
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
28.0
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
27.9
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
27.9
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
27.9
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
27.8
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
27.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
27.7
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
27.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
27.7
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
27.6
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
27.6
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
27.6
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
27.6
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
27.5
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
27.5
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
27.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
27.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
27.3
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
27.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
27.3
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
27.2
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
27.2
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
27.2
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
27.2
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
27.1
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
27.1
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
27.1
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
27.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
27.0
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
26.9
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
26.8
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
26.6
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
26.6
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
26.6
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
26.6
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
26.6
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
26.5
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
26.5
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
26.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
26.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
26.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
26.3
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
26.3
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
26.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
26.2
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
26.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
26.1
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
26.1
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
26.1
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
26.0
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
26.0
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
26.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
26.0
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
25.9
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
25.9
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
25.9
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
25.8
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
25.7
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
25.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
25.6
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
25.5
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
25.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
25.5
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
25.4
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
25.4
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
25.4
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
25.4
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.3
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
25.3
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
25.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
25.1
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
25.1
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
25.0
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
25.0
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
24.9
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
24.8
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
24.7
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
24.4
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
24.4
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
24.4
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
24.3
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
24.3
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
24.0
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
23.9
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
23.8
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
23.8
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
23.8
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
23.7
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
23.7
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
23.7
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
23.7
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
23.7
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
23.7
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
23.6
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
23.6
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
23.6
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
23.5
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
23.5
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
23.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
23.5
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
23.5
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
23.5
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
23.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
23.3
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
23.3
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
23.1
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
23.1
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
23.1
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
23.1
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
23.1
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
23.0
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
22.9
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
22.9
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
22.9
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
22.9
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
22.9
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
22.8
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
22.8
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
22.7
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
22.5
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
22.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
22.4
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
22.4
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
22.3
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
22.2
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
22.2
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
22.2
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
22.1
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
22.0
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
22.0
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
22.0
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
21.9
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
21.9
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
21.8
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
21.8
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
21.8
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
21.7
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
21.6
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
21.6
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
21.6
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
21.6
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
21.6
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
21.5
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
21.4
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
21.3
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
21.3
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
21.3
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
21.3
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
21.1
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
21.1
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
20.9
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
20.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
20.6
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
20.5
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
20.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
20.4
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
20.4
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
20.4
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
20.3
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
20.1
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
20.0
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
19.9
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
19.9
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
19.9
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
19.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
19.8
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
19.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
19.8
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
19.7
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
19.6
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
19.6
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
19.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
19.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
19.5
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
19.4
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
19.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
19.3
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
19.2
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
19.2
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
19.2
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
18.9
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
18.8
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
18.8
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
18.7
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
18.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
18.6
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
18.5
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
18.5
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
18.4
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
18.4
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
18.3
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
18.3
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
18.2
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
18.2
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
18.2
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
18.0
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
17.9
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
17.9
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
17.8
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
17.7
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
17.7
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
17.7
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
17.6
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
17.6
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
17.6
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
17.6
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
17.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
17.5
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
17.4
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
17.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
17.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
17.3
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
17.2
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
17.2
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
17.2
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
17.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
17.1
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
17.0
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
17.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
16.8
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
16.6
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
16.6
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
16.5
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
16.5
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
16.5
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
16.4
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
16.4
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
16.2
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
16.2
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
16.2
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
16.1
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
16.1
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
16.0
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
16.0
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
15.8
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
15.7
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
15.7
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
15.7
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
15.6
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
15.5
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
15.4
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
15.4
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
15.3
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
15.2
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
15.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
15.1
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
15.0
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
14.9
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
14.8
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
14.7
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
14.5
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
14.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
14.4
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
14.3
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
14.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
14.1
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
14.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
14.1
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
14.1
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
14.0
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
13.9
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
13.7
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
13.7
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
13.7
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
13.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
13.5
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
13.4
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
13.4
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
13.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
13.2
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
13.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
13.0
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
12.9
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
12.9
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
12.8
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
12.8
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
12.7
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
12.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
12.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
12.5
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
12.4
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.4
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
12.3
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
12.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
12.1
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
12.1
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
12.1
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
12.0
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
11.9
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
11.8
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
11.8
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
11.7
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
11.7
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
11.6
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
11.6
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
11.6
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
11.5
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
11.5
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.5
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
11.5
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
11.4
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
11.3
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
11.3
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
11.2
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
11.1
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
11.1
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
11.1
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
11.1
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
11.0
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
10.8
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
10.7
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
10.7
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
10.6
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
10.5
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
10.4
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
10.4
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
10.1
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
10.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
10.0
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
10.0
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
9.9
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
9.7
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
9.7
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
9.6
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
9.5
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
9.5
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
9.4
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
9.3
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
9.2
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
8.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
8.6
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
8.5
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
8.3
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
8.1
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
8.1
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
7.9
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
7.7
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
7.7
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
7.6
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
7.6
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
7.3
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
7.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
7.1
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
6.6
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
6.4
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
6.3
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
6.2
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
6.1
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
6.0
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
5.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
4.9
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
4.3
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
4.2
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
3.7
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
3.7
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
3.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TFDP1 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
25.8
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
46.4
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
45.1
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
44.9
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
44.0
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
41.8
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
41.2
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
40.0
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
39.7
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
39.2
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
39.0
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
38.2
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
38.2
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
35.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
35.3
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
34.8
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
34.8
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
34.5
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
34.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
34.2
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
34.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
34.1
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
33.1
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
33.1
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
32.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
32.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
32.0
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
31.5
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
31.0
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
31.0
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
31.0
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
30.6
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
30.6
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
30.2
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
30.1
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
29.4
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
28.6
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
28.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
28.1
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
27.8
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
27.7
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
27.5
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
27.3
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
26.8
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
26.8
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
26.6
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
26.5
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
26.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
26.3
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
25.8
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
25.7
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
25.4
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
25.4
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
25.3
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
24.8
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
24.4
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
24.3
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
24.0
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
23.8
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
23.6
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
23.3
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
23.2
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
23.0
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
22.7
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
22.6
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
22.0
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
21.4
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
21.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
21.3
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
21.3
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
21.3
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
21.3
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
21.0
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
20.9
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
20.9
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
20.2
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
20.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
19.3
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
18.1
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
18.0
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
17.4
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
17.4
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
17.2
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
16.9
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
16.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
16.1
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
15.9
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
15.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
15.3
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
14.8
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
14.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
14.4
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
13.6
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
13.5
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
12.4
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
12.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
11.8
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
10.0
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
8.8
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
8.5
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
TFDP1 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
22.2
Number of samples
282
Samples
Sample
Description
TPM
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
87.2
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
82.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
71.1
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
62.2
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
59.5
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
54.2
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
54.2
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
53.7
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
49.1
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
47.8
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
47.7
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
46.8
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
46.7
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
46.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
45.8
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
45.5
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
44.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
44.0
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
43.4
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
42.8
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
42.0
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
41.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
40.8
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
40.6
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
40.1
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
39.4
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
38.6
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
37.8
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
37.6
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
37.4
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
37.0
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
36.9
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
36.8
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
36.3
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
36.2
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
36.2
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
35.3
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
35.2
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
34.7
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
34.6
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
34.3
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
34.1
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
33.8
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
33.5
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
33.1
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
32.9
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
32.5
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
32.3
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
31.9
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
31.4
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
31.3
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
30.8
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
30.5
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
30.4
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
30.0
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
29.8
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
29.6
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
29.4
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
29.4
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
29.4
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
29.4
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
29.2
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
29.1
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
28.9
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
28.8
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
28.8
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
28.6
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
28.6
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
28.6
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
28.4
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
28.4
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
28.4
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
28.1
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
28.1
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
27.8
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
27.6
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
27.5
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
27.5
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
27.3
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
27.2
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
27.1
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
26.9
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
26.9
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
26.8
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
26.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
26.3
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
26.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
26.2
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
26.1
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
25.9
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
25.8
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
25.4
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
25.4
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
25.3
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
25.2
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
24.9
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
24.8
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
24.6
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
24.6
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
24.3
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
24.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
24.1
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
23.9
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
23.8
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
23.7
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
23.7
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
23.7
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
23.6
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
23.6
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
23.5
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
23.3
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
23.3
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
23.1
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
23.1
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
23.1
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
23.1
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
22.9
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
22.7
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
22.6
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
22.4
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
22.4
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
22.3
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
22.1
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
22.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
22.0
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
22.0
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
21.9
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
21.8
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
21.7
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
21.7
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
21.6
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
21.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
21.4
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
21.3
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
21.3
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
21.2
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
21.1
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
20.9
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
20.8
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
20.8
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
20.7
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
20.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
20.5
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
20.5
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
20.4
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
20.2
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
20.0
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
20.0
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
19.9
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
19.9
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
19.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
19.4
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
19.3
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
19.3
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
19.0
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
18.9
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
18.8
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
18.8
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
18.8
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
18.7
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
18.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
18.5
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
18.5
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
18.4
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
18.3
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
18.2
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
18.1
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
18.0
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
18.0
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
17.8
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
17.6
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
17.5
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
17.5
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
17.4
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
17.4
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
17.3
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
17.3
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.3
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
17.2
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
17.2
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
17.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
16.9
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
16.7
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
16.6
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
16.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
16.5
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
16.5
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
16.5
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
16.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
16.5
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
16.5
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
16.0
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
16.0
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
16.0
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
15.9
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
15.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
15.7
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
15.2
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
15.1
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
15.1
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
15.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
14.9
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
14.9
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
14.9
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
14.7
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
14.4
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
14.2
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
14.2
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
14.0
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
13.8
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
13.8
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
13.6
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
13.4
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.9
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
12.8
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
12.7
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
12.5
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
12.5
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
12.5
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
12.5
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
12.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
12.1
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
11.8
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
11.4
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
11.2
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
11.1
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
10.7
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
10.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
10.5
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
10.5
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
10.4
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
10.4
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
10.3
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
10.3
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
10.2
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
9.8
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
9.8
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
9.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
9.4
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
9.3
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
9.3
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
9.2
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
9.2
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
8.8
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
8.8
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
8.6
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
8.6
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
8.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
8.5
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
8.5
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
8.4
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
8.4
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
8.3
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
8.1
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
8.1
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
7.8
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
7.6
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
7.5
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
7.4
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
7.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
7.1
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
6.7
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
6.6
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
6.5
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
6.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
6.0
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.5
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
5.4
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
5.3
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
4.9
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
4.7
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
4.3
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
4.2
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
3.8
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
3.8
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
3.8
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
3.7
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
3.4
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
2.7
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0020120003
Tumor
1.5
CPT0078510003
Tumor
1.1
CPT0023690003
Tumor
1.1
CPT0007860003
Tumor
1.0
CPT0086030003
Tumor
0.8
CPT0065750003
Tumor
0.6
CPT0009060003
Tumor
0.6
CPT0087040003
Tumor
0.5
CPT0014370004
Tumor
0.5
CPT0079380003
Tumor
0.5
CPT0089020003
Tumor
0.5
CPT0078660003
Tumor
0.5
CPT0092790003
Tumor
0.5
CPT0066480003
Tumor
0.5
CPT0006900003
Tumor
0.5
CPT0025580004
Tumor
0.5
CPT0023710001
Normal
0.4
CPT0009020003
Normal
0.4
CPT0011240003
Tumor
0.4
CPT0065810003
Tumor
0.4
CPT0014450004
Tumor
0.4
CPT0079480003
Tumor
0.4
CPT0017410003
Tumor
0.4
CPT0001500009
Tumor
0.4
CPT0071150004
Tumor
0.3
CPT0078930003
Tumor
0.3
CPT0007320003
Tumor
0.3
CPT0012080003
Tumor
0.3
CPT0086950003
Tumor
0.3
CPT0077310003
Tumor
0.3
CPT0012280003
Tumor
0.3
CPT0025880003
Tumor
0.3
CPT0012370003
Tumor
0.3
CPT0087050003
Normal
0.3
CPT0088480003
Tumor
0.3
CPT0075560003
Tumor
0.2
CPT0012180003
Tumor
0.2
CPT0019130003
Tumor
0.2
CPT0079180003
Tumor
0.2
CPT0000870016
Tumor
0.2
CPT0086890003
Normal
0.2
CPT0000780007
Tumor
0.2
CPT0086360003
Tumor
0.2
CPT0006630003
Tumor
0.2
CPT0078670001
Normal
0.2
CPT0025050003
Tumor
0.2
CPT0077110003
Tumor
0.2
CPT0078840001
Normal
0.2
CPT0024680001
Normal
0.2
CPT0089480003
Normal
0.2
CPT0065870003
Tumor
0.2
CPT0010160003
Tumor
0.2
CPT0010110003
Tumor
0.2
CPT0077500001
Normal
0.2
CPT0089460004
Tumor
0.2
CPT0075570001
Normal
0.1
CPT0025060001
Normal
0.1
CPT0009000003
Tumor
0.1
CPT0084590001
Normal
0.1
CPT0014470001
Normal
0.1
CPT0084560003
Tumor
0.1
CPT0009080003
Normal
0.1
CPT0079300001
Normal
0.1
CPT0001220008
Tumor
0.1
CPT0012640003
Normal
0.1
CPT0092310003
Normal
0.1
CPT0012900004
Tumor
0.1
CPT0081600003
Tumor
0.1
CPT0092290003
Tumor
0.1
CPT0063330001
Normal
0.1
CPT0092730003
Tumor
0.1
CPT0069000003
Tumor
0.1
CPT0024670003
Tumor
0.1
CPT0019160001
Normal
0.1
CPT0021240003
Tumor
0.1
CPT0015730003
Tumor
0.1
CPT0012920003
Normal
0.1
CPT0088780001
Normal
0.0
CPT0000890001
Normal
0.0
CPT0002370001
Normal
0.0
CPT0088920001
Normal
0.0
CPT0082010001
Normal
0.0
CPT0000640003
Tumor
0.0
CPT0023360001
Normal
0.0
CPT0025230003
Tumor
0.0
CPT0079430001
Normal
0.0
CPT0078990003
Tumor
0.0
CPT0078940001
Normal
0.0
CPT0088570001
Normal
0.0
CPT0063320003
Tumor
0.0
CPT0079510001
Normal
0.0
CPT0010170001
Normal
0.0
CPT0064400001
Normal
0.0
CPT0017450001
Normal
0.0
CPT0001270001
Normal
0.0
CPT0065430003
Tumor
0.0
CPT0014350001
Normal
0.0
CPT0001230001
Normal
0.0
CPT0014160003
Tumor
0.0
CPT0092800003
Normal
0.0
CPT0086870003
Tumor
0.0
CPT0000660001
Normal
0.0
CPT0012670003
Tumor
0.0
CPT0015810003
Tumor
0.0
CPT0001260009
Tumor
-0.1
CPT0018250001
Normal
-0.1
CPT0086830003
Normal
-0.1
CPT0001190001
Normal
-0.1
CPT0086970003
Normal
-0.1
CPT0088640003
Normal
-0.1
CPT0007870001
Normal
-0.1
CPT0063640001
Normal
-0.1
CPT0079000001
Normal
-0.1
CPT0064370003
Tumor
-0.1
CPT0088550004
Tumor
-0.1
CPT0012090003
Normal
-0.1
CPT0075170001
Normal
-0.1
CPT0086820003
Tumor
-0.1
CPT0002270011
Tumor
-0.1
CPT0089040001
Normal
-0.1
CPT0092160003
Tumor
-0.1
CPT0079410003
Tumor
-0.1
CPT0012570003
Normal
-0.1
CPT0075130003
Tumor
-0.1
CPT0069190001
Normal
-0.1
CPT0014130001
Normal
-0.1
CPT0086370003
Normal
-0.1
CPT0088900003
Tumor
-0.1
CPT0012550003
Tumor
-0.1
CPT0077320001
Normal
-0.1
CPT0081990003
Tumor
-0.1
CPT0076330003
Tumor
-0.1
CPT0015910003
Tumor
-0.1
CPT0088710001
Normal
-0.1
CPT0088760003
Tumor
-0.1
CPT0078530001
Normal
-0.1
CPT0001510001
Normal
-0.1
CPT0069010001
Normal
-0.2
CPT0077140001
Normal
-0.2
CPT0010120001
Normal
-0.2
CPT0001550001
Normal
-0.2
CPT0079270003
Tumor
-0.2
CPT0069160003
Tumor
-0.2
CPT0001340003
Tumor
-0.2
CPT0023350003
Tumor
-0.2
CPT0025610001
Normal
-0.2
CPT0025920001
Normal
-0.2
CPT0065820001
Normal
-0.2
CPT0001540009
Tumor
-0.2
CPT0078830003
Tumor
-0.2
CPT0092190003
Normal
-0.2
CPT0012290003
Normal
-0.3
CPT0092740003
Normal
-0.3
CPT0088630003
Tumor
-0.3
CPT0007470001
Normal
-0.3
CPT0088500001
Normal
-0.3
CPT0006730001
Normal
-0.3
CPT0063630003
Tumor
-0.3
CPT0017850003
Tumor
-0.3
CPT0085670003
Tumor
-0.3
CPT0013790003
Normal
-0.3
CPT0076350001
Normal
-0.4
CPT0081620001
Normal
-0.4
CPT0066520001
Normal
-0.4
CPT0077490003
Tumor
-0.4
CPT0012770003
Normal
-0.4
CPT0001350001
Normal
-0.4
CPT0000790001
Normal
-0.4
CPT0065450001
Normal
-0.4
CPT0078800003
Tumor
-0.4
CPT0001180009
Tumor
-0.5
CPT0006950001
Normal
-0.5
CPT0002350011
Tumor
-0.5
CPT0020130001
Normal
-0.5
CPT0079230003
Tumor
-0.6
CPT0088690003
Tumor
-0.7
CPT0026410003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0006440003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0020020001
Normal
N/A
CPT0065930003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0025350003
Tumor
N/A
CPT0066430001
Normal
N/A
CPT0081880003
Tumor
N/A
CPT0026420001
Normal
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
