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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AKR1B10 is not prognostic in Liver Hepatocellular Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
413.8
Number of samples
362
Samples
Sample
Description
TPM
TCGA-DD-A1EE-01A
0 years, male, white, stage:Stage IIIA, dead, 349 days
4765.1
TCGA-T1-A6J8-01A
0 years, male, white, stage:'--, alive, 23 days
3159.6
TCGA-DD-AACK-01A
0 years, male, asian, stage:Stage I, alive, 9 days
3110.1
TCGA-BC-A10W-01A
0 years, male, asian, stage:'--, dead, 91 days
3032.8
TCGA-2Y-A9GS-01A
0 years, male, white, stage:'--, dead, 724 days
3004.4
TCGA-DD-A1EG-01A
0 years, male, white, stage:Stage I, dead, 1372 days
2816.5
TCGA-G3-AAV5-01A
0 years, male, white, stage:Stage II, alive, 354 days
2737.8
TCGA-FV-A3I1-01A
0 years, female, white, stage:Stage II, dead, 247 days
2502.5
TCGA-DD-AAEI-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
2376.8
TCGA-DD-AACH-01A
0 years, male, asian, stage:Stage II, dead, 195 days
2372.9
TCGA-BC-A8YO-01A
0 years, female, white, stage:Stage IIIC, alive, 562 days
2236.5
TCGA-DD-A4NO-01A
0 years, male, white, stage:Stage I, alive, 2245 days
2222.9
TCGA-RC-A7SK-01A
0 years, male, asian, stage:Stage I, alive, 472 days
2165.6
TCGA-CC-A3MC-01A
0 years, male, asian, stage:Stage IIIA, alive, 363 days
2132.6
TCGA-ZP-A9D1-01A
0 years, female, white, stage:'--, alive, 21 days
2053.0
TCGA-CC-A5UE-01A
0 years, male, asian, stage:Stage IIIB, dead, 272 days
1959.0
TCGA-DD-AACQ-01A
0 years, male, asian, stage:Stage II, dead, 432 days
1847.8
TCGA-FV-A2QQ-01A
0 years, male, white, stage:Stage I, alive, 729 days
1798.1
TCGA-DD-AADM-01A
0 years, male, asian, stage:Stage II, dead, 12 days
1770.9
TCGA-DD-A39Y-01A
0 years, male, asian, stage:Stage I, dead, 171 days
1757.3
TCGA-UB-A7MD-01A
0 years, male, black or african american, stage:Stage I, dead, 52 days
1748.3
TCGA-DD-AACU-01A
0 years, male, asian, stage:Stage I, alive, 1567 days
1711.2
TCGA-2Y-A9GW-01A
0 years, male, white, stage:Stage I, dead, 1271 days
1703.1
TCGA-CC-A8HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 140 days
1692.6
TCGA-FV-A2QR-01A
0 years, male, white, stage:Stage I, dead, 581 days
1676.9
TCGA-MI-A75C-01A
0 years, male, white, stage:Stage I, alive, 291 days
1590.5
TCGA-DD-A4NQ-01A
0 years, male, white, stage:Stage II, dead, 373 days
1576.3
TCGA-2Y-A9GY-01A
0 years, female, white, stage:Stage II, dead, 757 days
1561.1
TCGA-DD-AAVY-01A
0 years, male, asian, stage:Stage IIIA, alive, 1970 days
1465.2
TCGA-2Y-A9GX-01A
0 years, male, white, stage:Stage I, alive, 2442 days
1460.5
TCGA-O8-A75V-01A
0 years, male, stage:Stage I, alive, 538 days
1444.2
TCGA-BC-A112-01A
0 years, male, white, stage:'--, dead, 153 days
1444.1
TCGA-CC-5262-01A
0 years, male, asian, stage:Stage IIIC, dead, 103 days
1422.5
TCGA-G3-A25V-01A
0 years, male, white, stage:Stage I, alive, 860 days
1404.6
TCGA-DD-AAVV-01A
0 years, male, asian, stage:Stage II, alive, 2455 days
1392.7
TCGA-DD-AACX-01A
0 years, male, asian, stage:Stage II, alive, 170 days
1388.8
TCGA-DD-A1EL-01A
0 years, male, black or african american, stage:Stage II, dead, 415 days
1365.5
TCGA-DD-A39X-01A
0 years, female, white, stage:Stage I, dead, 1694 days
1257.0
TCGA-G3-A25S-01A
0 years, male, white, stage:Stage I, dead, 416 days
1218.3
TCGA-5R-AA1C-01A
0 years, male, white, stage:Stage II, alive, 520 days
1164.8
TCGA-MI-A75E-01A
0 years, male, white, stage:Stage IIIC, alive, 507 days
1163.2
TCGA-BD-A3ER-01A
0 years, male, white, stage:Stage II, alive, 1115 days
1160.7
TCGA-HP-A5MZ-01A
0 years, male, stage:Stage I, dead, 91 days
1147.3
TCGA-G3-AAV1-01A
0 years, male, asian, stage:Stage IIIC, dead, 359 days
1078.2
TCGA-DD-A4NR-01A
0 years, female, white, stage:Stage I, dead, 9 days
1069.8
TCGA-DD-AACT-01A
0 years, female, asian, stage:Stage I, alive, 1562 days
1048.6
TCGA-MI-A75I-01A
0 years, male, black or african american, stage:'--, alive, 630 days
1035.3
TCGA-ZS-A9CD-01A
0 years, male, white, stage:Stage II, dead, 1386 days
1030.2
TCGA-DD-A4NG-01A
0 years, male, white, stage:Stage IIIA, dead, 802 days
1011.4
TCGA-DD-A113-01A
0 years, female, white, stage:Stage II, alive, 2425 days
1003.2
TCGA-ED-A7XP-01A
0 years, female, asian, stage:Stage II, alive, 400 days
973.3
TCGA-DD-A3A4-01A
0 years, male, white, stage:Stage IIIA, dead, 612 days
958.2
TCGA-DD-A73A-01A
0 years, male, white, stage:Stage I, alive, 728 days
956.5
TCGA-UB-AA0U-01A
0 years, male, white, stage:Stage II, alive, 327 days
946.6
TCGA-EP-A3JL-01A
0 years, male, white, stage:Stage I, alive, 303 days
945.1
TCGA-RC-A7SF-01A
0 years, male, asian, stage:Stage I, alive, 579 days
929.3
TCGA-BD-A3EP-01A
0 years, female, black or african american, stage:Stage I, alive, 409 days
926.7
TCGA-DD-AAVS-01A
0 years, male, asian, stage:Stage I, alive, 1823 days
923.9
TCGA-5C-A9VH-01A
0 years, male, white, stage:Stage I, alive, 322 days
898.1
TCGA-DD-AAD3-01A
0 years, male, asian, stage:Stage I, alive, 1295 days
885.0
TCGA-CC-5258-01A
0 years, male, asian, stage:Stage II, dead, 129 days
883.4
TCGA-G3-A5SM-01A
0 years, male, white, stage:Stage II, alive, 520 days
853.8
TCGA-KR-A7K0-01A
0 years, male, white, stage:Stage I, dead, 65 days
846.4
TCGA-G3-A3CK-01A
0 years, male, asian, stage:Stage I, alive, 585 days
834.4
TCGA-DD-A1EI-01A
0 years, male, asian, stage:Stage I, alive, 183 days
832.3
TCGA-CC-A3MB-01A
0 years, male, asian, stage:Stage IIIA, dead, 315 days
828.1
TCGA-DD-A11D-01A
0 years, female, white, stage:Stage I, dead, 1560 days
822.8
TCGA-G3-A7M7-01A
0 years, male, white, stage:Stage I, alive, 361 days
819.4
TCGA-CC-A7IK-01A
0 years, male, asian, stage:Stage IIIA, dead, 262 days
817.7
TCGA-K7-AAU7-01A
0 years, male, white, stage:Stage II, alive, 359 days
816.4
TCGA-DD-AAD2-01A
0 years, male, asian, stage:Stage I, alive, 658 days
789.2
TCGA-DD-AAVW-01A
0 years, male, asian, stage:Stage I, alive, 2317 days
775.8
TCGA-DD-AACS-01A
0 years, male, asian, stage:Stage I, alive, 1804 days
771.7
TCGA-DD-A3A1-01A
0 years, male, stage:Stage IIIA, dead, 233 days
750.3
TCGA-ED-A4XI-01A
0 years, male, asian, stage:Stage II, alive, 819 days
715.6
TCGA-WX-AA44-01A
0 years, female, white, stage:Stage I, alive, 615 days
715.3
TCGA-DD-AAD5-01A
0 years, male, asian, stage:Stage I, alive, 1345 days
682.8
TCGA-DD-AAW0-01A
0 years, male, asian, stage:Stage I, alive, 2015 days
672.8
TCGA-LG-A6GG-01A
0 years, female, white, stage:Stage II, alive, 387 days
652.4
TCGA-DD-AACZ-01A
0 years, female, asian, stage:Stage I, dead, 171 days
650.2
TCGA-DD-AADJ-01A
0 years, female, asian, stage:Stage I, alive, 1066 days
648.4
TCGA-ZP-A9CY-01A
0 years, female, white, stage:'--, alive, 782 days
636.5
TCGA-DD-AADR-01A
0 years, male, asian, stage:Stage I, alive, 2028 days
633.0
TCGA-ZP-A9CV-01A
0 years, male, white, stage:'--, dead, 1088 days
609.4
TCGA-K7-A6G5-01A
0 years, male, white, stage:Stage I, alive, 512 days
598.2
TCGA-MI-A75H-01A
0 years, male, white, stage:'--, alive, 747 days
593.9
TCGA-DD-AAEG-01A
0 years, female, asian, stage:Stage I, alive, 719 days
586.8
TCGA-CC-A5UD-01A
0 years, male, asian, stage:Stage IIIA, dead, 304 days
577.5
TCGA-GJ-A3OU-01A
0 years, male, white, stage:Stage I, alive, 879 days
557.3
TCGA-GJ-A6C0-01A
0 years, female, white, stage:Stage II, dead, 31 days
537.4
TCGA-DD-AAC9-01A
0 years, male, asian, stage:Stage I, alive, 347 days
517.6
TCGA-CC-A1HT-01A
0 years, male, asian, stage:Stage IIIA, dead, 101 days
515.8
TCGA-CC-A7IL-01A
0 years, male, asian, stage:Stage IIIA, dead, 278 days
502.1
TCGA-DD-AADV-01A
0 years, male, asian, stage:Stage I, alive, 574 days
495.6
TCGA-CC-A8HV-01A
0 years, female, asian, stage:Stage II, dead, 279 days
493.7
TCGA-DD-AAEH-01A
0 years, male, asian, stage:Stage I, alive, 784 days
489.4
TCGA-3K-AAZ8-01A
0 years, male, black or african american, stage:Stage IIIB, alive, 396 days
475.8
TCGA-DD-AAVR-01A
0 years, male, asian, stage:Stage I, alive, 2513 days
463.6
TCGA-YA-A8S7-01A
0 years, male, white, stage:Stage IIIA, dead, 412 days
458.9
TCGA-DD-A4NI-01A
0 years, male, white, stage:Stage II, alive, 816 days
458.7
TCGA-DD-AAD8-01A
0 years, female, asian, stage:Stage I, alive, 1219 days
443.0
TCGA-DD-AACJ-01A
0 years, male, asian, stage:Stage II, alive, 2102 days
428.1
TCGA-DD-AAE9-01A
0 years, male, asian, stage:Stage I, alive, 722 days
422.9
TCGA-5R-AAAM-01A
0 years, female, white, stage:Stage II, dead, 46 days
403.6
TCGA-CC-5261-01A
0 years, male, asian, stage:Stage II, dead, 97 days
403.3
TCGA-DD-AAVU-01A
0 years, male, asian, stage:Stage II, alive, 2202 days
395.6
TCGA-ZP-A9D4-01A
0 years, female, white, stage:'--, alive, 395 days
391.7
TCGA-UB-A7MC-01A
0 years, male, white, stage:Stage IIIA, alive, 500 days
374.2
TCGA-KR-A7K8-01A
0 years, male, stage:Stage I, alive, 906 days
372.4
TCGA-GJ-A9DB-01A
0 years, male, white, stage:Stage I, dead, 67 days
353.0
TCGA-BC-A10U-01A
0 years, male, white, stage:'--, dead, 837 days
348.1
TCGA-ZS-A9CE-01A
0 years, female, white, stage:Stage II, alive, 1241 days
335.7
TCGA-EP-A3RK-01A
0 years, male, white, stage:Stage IIIA, alive, 363 days
334.0
TCGA-DD-A4NN-01A
0 years, female, white, stage:Stage I, dead, 899 days
330.2
TCGA-DD-AAD1-01A
0 years, female, asian, stage:Stage I, alive, 564 days
328.7
TCGA-DD-AACI-01A
0 years, male, asian, stage:Stage II, alive, 1618 days
325.9
TCGA-DD-AAVZ-01A
0 years, male, asian, stage:Stage I, alive, 1900 days
325.5
TCGA-ZP-A9D2-01A
0 years, male, white, stage:'--, dead, 765 days
323.2
TCGA-DD-AACE-01A
0 years, male, asian, stage:Stage I, alive, 2184 days
314.5
TCGA-DD-A4NJ-01A
0 years, female, white, stage:Stage II, alive, 928 days
314.1
TCGA-2Y-A9HA-01A
0 years, male, white, stage:Stage II, dead, 36 days
305.2
TCGA-DD-A119-01A
0 years, male, asian, stage:Stage IV, dead, 223 days
301.4
TCGA-DD-AADL-01A
0 years, male, asian, stage:Stage I, alive, 636 days
300.0
TCGA-DD-A1EJ-01A
0 years, female, white, stage:Stage IIIC, dead, 1005 days
299.6
TCGA-ES-A2HT-01A
0 years, male, black or african american, stage:Stage I, dead, 438 days
298.2
TCGA-DD-AADU-01A
0 years, male, asian, stage:Stage II, alive, 554 days
297.1
TCGA-G3-AAV3-01A
0 years, female, white, stage:Stage II, alive, 412 days
297.1
TCGA-DD-AAC8-01A
0 years, male, asian, stage:Stage I, dead, 16 days
295.4
TCGA-XR-A8TG-01A
0 years, male, white, stage:Stage I, alive, 898 days
289.6
TCGA-RC-A6M6-01A
0 years, male, white, stage:Stage II, alive, 9 days
286.7
TCGA-BC-A69H-01A
0 years, male, white, stage:Stage II, alive, 444 days
284.8
TCGA-DD-A114-01A
0 years, male, black or african american, stage:Stage II, dead, 1149 days
278.5
TCGA-FV-A496-01A
0 years, female, white, stage:Stage I, alive, 10 days
266.2
TCGA-K7-A5RG-01A
0 years, male, black or african american, stage:Stage I, alive, 519 days
263.3
TCGA-MI-A75G-01A
0 years, male, white, stage:Stage II, alive, 698 days
261.3
TCGA-ZP-A9CZ-01A
0 years, male, asian, stage:'--, alive, 706 days
258.2
TCGA-EP-A2KC-01A
0 years, male, black or african american, stage:Stage I, dead, 19 days
256.1
TCGA-CC-A3MA-01A
0 years, male, asian, stage:Stage IIIA, dead, 303 days
255.1
TCGA-G3-A25Y-01A
0 years, female, asian, stage:Stage I, dead, 452 days
242.3
TCGA-CC-A7IG-01A
0 years, male, asian, stage:Stage II, dead, 299 days
241.8
TCGA-UB-A7ME-01A
0 years, male, asian, stage:Stage I, alive, 486 days
234.6
TCGA-BC-A10Q-01A
0 years, female, white, stage:'--, dead, 1135 days
233.4
TCGA-RC-A6M4-01A
0 years, female, white, stage:Stage IIIA, alive, 22 days
228.9
TCGA-G3-A5SJ-01A
0 years, male, white, stage:Stage I, alive, 698 days
216.3
TCGA-G3-A3CG-01A
0 years, male, white, stage:Stage I, alive, 673 days
212.5
TCGA-WQ-AB4B-01A
0 years, male, white, stage:Stage II, alive, 395 days
212.2
TCGA-DD-A4NS-01A
0 years, female, white, stage:Stage I, dead, 2456 days
204.0
TCGA-EP-A2KA-01A
0 years, female, white, stage:Stage IIIA, dead, 627 days
201.6
TCGA-FV-A3R2-01A
0 years, male, white, stage:Stage I, dead, 194 days
201.4
TCGA-DD-A1EK-01A
0 years, female, white, stage:Stage IVB, dead, 558 days
198.3
TCGA-DD-A4NB-01A
0 years, male, white, stage:Stage I, alive, 989 days
190.8
TCGA-BC-A10S-01A
0 years, male, white, stage:'--, dead, 1423 days
189.5
TCGA-G3-A3CH-01A
0 years, male, asian, stage:Stage IIIA, alive, 780 days
187.6
TCGA-DD-A115-01A
0 years, male, white, stage:Stage IIIA, dead, 2542 days
184.0
TCGA-G3-A25Z-01A
0 years, male, asian, stage:Stage I, alive, 655 days
183.5
TCGA-KR-A7K7-01A
0 years, female, white, stage:Stage II, alive, 951 days
180.3
TCGA-KR-A7K2-01A
0 years, male, white, stage:Stage I, alive, 829 days
180.1
TCGA-CC-5260-01A
0 years, female, asian, stage:Stage IIIC, dead, 87 days
179.7
TCGA-G3-A5SL-01A
0 years, male, white, stage:Stage II, alive, 621 days
178.4
TCGA-DD-AACY-01A
0 years, male, asian, stage:Stage I, alive, 1450 days
177.4
TCGA-ED-A459-01A
0 years, male, asian, stage:Stage II, alive, 910 days
174.1
TCGA-2Y-A9H5-01A
0 years, female, white, stage:Stage I, dead, 555 days
169.7
TCGA-DD-AACB-01A
0 years, female, asian, stage:Stage I, alive, 2324 days
160.0
TCGA-G3-AAV7-01A
0 years, male, asian, stage:Stage II, alive, 361 days
159.8
TCGA-2Y-A9HB-01A
0 years, male, stage:Stage I, alive, 260 days
159.1
TCGA-DD-AAED-01A
0 years, male, asian, stage:Stage I, alive, 763 days
151.3
TCGA-2Y-A9H1-01A
0 years, male, white, stage:Stage I, dead, 1229 days
150.8
TCGA-DD-AADB-01A
0 years, male, asian, stage:Stage I, alive, 1242 days
141.9
TCGA-BC-A10Z-01A
0 years, female, white, stage:Stage I, dead, 34 days
140.3
TCGA-4R-AA8I-01A
0 years, male, white, stage:Stage II, dead, 262 days
136.2
TCGA-FV-A4ZP-01A
0 years, male, white, stage:Stage IIIA, dead, 2486 days
134.9
TCGA-DD-AAEK-01A
0 years, male, asian, stage:Stage II, alive, 1067 days
131.5
TCGA-DD-AADK-01A
0 years, female, asian, stage:Stage II, alive, 1049 days
131.4
TCGA-CC-A5UC-01A
0 years, male, asian, stage:Stage IIIA, dead, 347 days
126.7
TCGA-BW-A5NO-01A
0 years, male, black or african american, stage:Stage IIIA, alive, 20 days
126.4
TCGA-DD-A39V-01A
0 years, male, white, stage:Stage II, dead, 643 days
126.2
TCGA-CC-A7IJ-01A
0 years, male, asian, stage:Stage II, alive, 382 days
125.5
TCGA-DD-A3A7-01A
0 years, male, stage:Stage IIIB, dead, 419 days
119.3
TCGA-FV-A495-01A
0 years, female, white, stage:Stage II, alive, 1 days
113.7
TCGA-DD-AAE7-01A
0 years, male, asian, stage:Stage I, alive, 644 days
109.1
TCGA-DD-AADA-01A
0 years, female, asian, stage:Stage I, alive, 1233 days
105.1
TCGA-G3-AAUZ-01A
0 years, male, stage:Stage I, alive, 480 days
102.7
TCGA-DD-AADN-01A
0 years, male, asian, stage:Stage I, alive, 898 days
98.4
TCGA-DD-AACP-01A
0 years, male, asian, stage:Stage I, alive, 415 days
98.2
TCGA-DD-AACL-01A
0 years, female, asian, stage:Stage I, dead, 107 days
94.0
TCGA-DD-AADP-01A
0 years, male, asian, stage:Stage I, alive, 458 days
93.0
TCGA-DD-A3A3-01A
0 years, male, asian, stage:Stage I, dead, 535 days
91.4
TCGA-BC-A5W4-01A
0 years, male, white, stage:Stage IIIA, dead, 547 days
85.0
TCGA-DD-AACO-01A
0 years, male, asian, stage:Stage I, alive, 1876 days
83.7
TCGA-ZS-A9CF-01A
0 years, male, white, stage:Stage II, alive, 2412 days
83.1
TCGA-DD-A3A9-01A
0 years, female, white, stage:Stage IVB, dead, 931 days
81.5
TCGA-DD-A73E-01A
0 years, male, white, stage:Stage I, alive, 44 days
79.2
TCGA-DD-A73D-01A
0 years, female, white, stage:Stage II, alive, 693 days
79.2
TCGA-ED-A8O6-01A
0 years, female, asian, stage:Stage IIIA, dead, 56 days
77.5
TCGA-CC-5263-01A
0 years, male, asian, stage:Stage IIIA, dead, 129 days
77.2
TCGA-DD-A4NF-01A
0 years, male, white, stage:Stage I, alive, 942 days
76.5
TCGA-CC-A7IH-01A
0 years, male, asian, stage:Stage IIIA, alive, 365 days
73.3
TCGA-DD-A4NV-01A
0 years, male, white, stage:Stage IIIA, alive, 2398 days
71.5
TCGA-DD-A1EA-01A
0 years, male, asian, stage:Stage II, alive, 2415 days
70.7
TCGA-G3-A5SK-01A
0 years, male, white, stage:Stage I, alive, 744 days
68.7
TCGA-ED-A66Y-01A
0 years, female, asian, stage:Stage IIIA, dead, 296 days
67.9
TCGA-5R-AA1D-01A
0 years, female, white, stage:Stage IIIA, alive, 449 days
67.6
TCGA-DD-A4NH-01A
0 years, female, white, stage:Stage IIIB, alive, 917 days
65.4
TCGA-BD-A2L6-01A
0 years, male, white, stage:'--, alive, 1363 days
62.3
TCGA-DD-A11B-01A
0 years, male, white, stage:Stage I, dead, 14 days
59.9
TCGA-DD-AAE1-01A
0 years, male, asian, stage:Stage I, alive, 552 days
57.0
TCGA-ED-A97K-01A
0 years, male, asian, stage:Stage IIIA, alive, 6 days
56.4
TCGA-BC-A10R-01A
0 years, female, white, stage:'--, dead, 308 days
55.3
TCGA-ES-A2HS-01A
0 years, male, white, stage:Stage I, dead, 688 days
55.0
TCGA-DD-AAD6-01A
0 years, male, asian, stage:Stage IIIA, alive, 672 days
53.1
TCGA-LG-A9QD-01A
0 years, male, white, stage:Stage IIIA, alive, 366 days
51.6
TCGA-DD-A4NE-01A
0 years, female, white, stage:Stage IIIA, dead, 660 days
51.3
TCGA-FV-A3R3-01A
0 years, female, white, stage:Stage I, dead, 366 days
50.1
TCGA-RC-A7SH-01A
0 years, male, asian, stage:Stage II, alive, 468 days
47.7
TCGA-G3-A25T-01A
0 years, female, white, stage:Stage IIIA, alive, 1553 days
47.4
TCGA-DD-AAE2-01A
0 years, male, asian, stage:Stage I, alive, 638 days
46.0
TCGA-FV-A3I0-01A
0 years, female, white, stage:Stage II, alive, 848 days
41.9
TCGA-G3-A7M6-01A
0 years, female, white, stage:Stage I, alive, 632 days
41.5
TCGA-ED-A66X-01A
0 years, male, asian, stage:Stage IIIA, alive, 406 days
40.0
TCGA-DD-AAE6-01A
0 years, female, asian, stage:Stage I, alive, 141 days
39.8
TCGA-DD-AACF-01A
0 years, male, asian, stage:Stage I, dead, 365 days
39.8
TCGA-RC-A6M5-01A
0 years, female, white, stage:Stage IVA, alive, 15 days
37.1
TCGA-RG-A7D4-01A
0 years, male, black or african american, stage:Stage II, alive, 1098 days
36.1
TCGA-DD-A39Z-01A
0 years, female, stage:Stage II, dead, 601 days
35.0
TCGA-DD-AACN-01A
0 years, male, asian, stage:Stage I, alive, 1302 days
33.6
TCGA-CC-A7IF-01A
0 years, male, asian, stage:Stage IIIA, dead, 649 days
32.4
TCGA-DD-AACG-01A
0 years, male, asian, stage:Stage II, dead, 469 days
31.9
TCGA-DD-A116-01A
0 years, male, asian, stage:Stage IIIA, dead, 1622 days
31.8
TCGA-CC-A7IE-01A
0 years, male, asian, stage:Stage IIIA, dead, 217 days
31.5
TCGA-DD-AAW3-01A
0 years, male, asian, stage:Stage I, alive, 1633 days
31.5
TCGA-DD-AAW2-01A
0 years, male, asian, stage:Stage I, alive, 1855 days
30.3
TCGA-DD-AADC-01A
0 years, male, asian, stage:Stage I, dead, 425 days
29.8
TCGA-G3-A25X-01A
0 years, male, asian, stage:Stage II, alive, 1779 days
29.6
TCGA-CC-5264-01A
0 years, male, asian, stage:Stage IIIA, dead, 102 days
29.6
TCGA-DD-AADI-01A
0 years, female, asian, stage:Stage I, alive, 1085 days
29.6
TCGA-WJ-A86L-01A
0 years, female, white, stage:Stage I, alive, 345 days
29.2
TCGA-DD-AAEA-01A
0 years, male, asian, stage:Stage I, alive, 575 days
27.4
TCGA-ED-A7PY-01A
0 years, female, asian, stage:Stage II, alive, 390 days
26.5
TCGA-RC-A7S9-01A
0 years, female, asian, stage:Stage I, alive, 640 days
26.4
TCGA-EP-A26S-01A
0 years, male, white, stage:Stage I, alive, 608 days
26.2
TCGA-UB-A7MF-01A
0 years, male, white, stage:Stage IIIA, dead, 214 days
25.8
TCGA-2Y-A9GV-01A
0 years, female, white, stage:Stage I, dead, 2532 days
25.1
TCGA-DD-AAVQ-01A
0 years, male, asian, stage:Stage I, alive, 2728 days
25.1
TCGA-DD-A4ND-01A
0 years, female, white, stage:Stage I, alive, 2746 days
23.8
TCGA-XR-A8TC-01A
0 years, female, white, stage:Stage I, alive, 1339 days
23.3
TCGA-DD-AAW1-01A
0 years, male, asian, stage:Stage IIIA, alive, 1989 days
22.9
TCGA-DD-AACC-01A
0 years, male, asian, stage:Stage I, dead, 1685 days
22.3
TCGA-EP-A12J-01A
0 years, male, black or african american, stage:Stage I, alive, 570 days
22.0
TCGA-ZS-A9CG-01A
0 years, male, white, stage:Stage II, alive, 341 days
19.8
TCGA-DD-AA3A-01A
0 years, female, white, stage:Stage I, dead, 410 days
19.7
TCGA-G3-AAV0-01A
0 years, male, asian, stage:Stage I, alive, 476 days
19.0
TCGA-DD-AADW-01A
0 years, male, asian, stage:Stage I, alive, 587 days
18.9
TCGA-2Y-A9H9-01A
0 years, male, white, stage:Stage I, alive, 697 days
18.5
TCGA-ED-A5KG-01A
0 years, female, asian, stage:Stage II, alive, 854 days
18.3
TCGA-DD-AADY-01A
0 years, female, asian, stage:Stage I, alive, 555 days
18.2
TCGA-BC-A217-01A
0 years, female, white, stage:Stage II, dead, 1397 days
17.8
TCGA-MR-A8JO-01A
0 years, male, white, stage:Stage I, alive, 330 days
17.4
TCGA-G3-A3CJ-01A
0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days
17.4
TCGA-DD-AAEE-01A
0 years, male, asian, stage:Stage I, alive, 810 days
16.9
TCGA-DD-AACV-01A
0 years, male, asian, stage:Stage I, alive, 1531 days
16.8
TCGA-DD-AADF-01A
0 years, female, asian, stage:Stage I, dead, 115 days
16.1
TCGA-BC-A110-01A
0 years, female, black or african american, stage:'--, dead, 2116 days
15.5
TCGA-CC-5259-01A
0 years, female, asian, stage:Stage IIIC, alive, 250 days
15.1
TCGA-DD-A3A8-01A
0 years, male, white, stage:Stage II, dead, 11 days
14.7
TCGA-PD-A5DF-01A
0 years, female, white, stage:Stage IIIB, dead, 639 days
13.9
TCGA-DD-AADQ-01A
0 years, male, asian, stage:Stage II, alive, 436 days
13.4
TCGA-ED-A7PX-01A
0 years, female, asian, stage:Stage II, alive, 6 days
12.9
TCGA-DD-A4NL-01A
0 years, male, white, stage:Stage I, alive, 1711 days
12.8
TCGA-BC-A10X-01A
0 years, female, white, stage:Stage IIIA, dead, 770 days
12.7
TCGA-K7-A5RF-01A
0 years, male, white, stage:Stage I, alive, 631 days
12.1
TCGA-DD-A1EH-01A
0 years, male, white, stage:Stage III, alive, 1495 days
12.1
TCGA-2Y-A9H2-01A
0 years, female, white, stage:Stage I, alive, 1731 days
12.0
TCGA-DD-AAE3-01A
0 years, male, asian, stage:Stage I, alive, 566 days
11.3
TCGA-G3-A7M9-01A
0 years, male, white, stage:Stage IIIB, dead, 56 days
11.2
TCGA-DD-AACA-01A
0 years, male, asian, stage:Stage I, alive, 2301 days
11.2
TCGA-RC-A7SB-01A
0 years, male, asian, stage:Stage II, alive, 588 days
10.6
TCGA-ED-A627-01A
0 years, male, white, stage:Stage I, alive, 423 days
10.5
TCGA-G3-A7M8-01A
0 years, male, asian, stage:Stage I, alive, 430 days
10.3
TCGA-DD-A73B-01A
0 years, female, white, stage:Stage I, dead, 283 days
9.3
TCGA-DD-AAVP-01A
0 years, male, asian, stage:Stage I, alive, 2752 days
9.3
TCGA-2Y-A9H0-01A
0 years, male, white, stage:Stage IIIA, alive, 3675 days
8.7
TCGA-BC-A3KG-01A
0 years, female, white, stage:Stage II, alive, 680 days
7.8
TCGA-G3-A5SI-01A
0 years, male, asian, stage:Stage II, dead, 768 days
7.5
TCGA-EP-A2KB-01A
0 years, female, white, stage:Stage I, dead, 596 days
7.0
TCGA-NI-A8LF-01A
0 years, male, white, stage:Stage I, alive, 799 days
6.7
TCGA-G3-AAV2-01A
0 years, male, white, stage:Stage I, alive, 372 days
6.6
TCGA-DD-AACW-01A
0 years, male, asian, stage:Stage I, alive, 1424 days
6.5
TCGA-2Y-A9GZ-01A
0 years, female, white, stage:Stage II, dead, 848 days
6.5
TCGA-DD-AAD0-01A
0 years, female, asian, stage:Stage I, alive, 137 days
6.4
TCGA-DD-AAE4-01A
0 years, female, asian, stage:Stage I, alive, 608 days
6.2
TCGA-2Y-A9GU-01A
0 years, female, white, stage:Stage I, alive, 1939 days
6.0
TCGA-G3-A3CI-01A
0 years, male, white, stage:Stage I, alive, 180 days
5.8
TCGA-UB-A7MA-01A
0 years, female, white, stage:Stage II, alive, 848 days
5.3
TCGA-UB-A7MB-01A
0 years, male, white, stage:Stage II, alive, 601 days
5.1
TCGA-CC-A8HU-01A
0 years, female, asian, stage:Stage IIIA, dead, 344 days
5.0
TCGA-5C-AAPD-01A
0 years, male, asian, stage:Stage II, alive, 20 days
4.8
TCGA-BC-A10T-01A
0 years, male, white, stage:'--, dead, 837 days
4.6
TCGA-2Y-A9H4-01A
0 years, male, black or african american, stage:Stage I, alive, 1452 days
4.3
TCGA-BC-A69I-01A
0 years, male, white, stage:Stage I, alive, 387 days
4.0
TCGA-ED-A7PZ-01A
0 years, male, asian, stage:Stage II, alive, 6 days
3.8
TCGA-MR-A520-01A
0 years, male, white, stage:Stage I, alive, 229 days
3.8
TCGA-ZP-A9D0-01A
0 years, female, black or african american, stage:'--, alive, 1091 days
3.7
TCGA-WX-AA47-01A
0 years, female, white, stage:Stage IIIA, dead, 556 days
3.7
TCGA-CC-A8HS-01A
0 years, male, asian, stage:Stage IIIC, dead, 300 days
3.6
TCGA-DD-AADO-01A
0 years, male, asian, stage:Stage I, alive, 453 days
3.3
TCGA-BC-A216-01A
0 years, female, white, stage:Stage IIIA, alive, 1351 days
2.6
TCGA-FV-A4ZQ-01A
0 years, male, white, stage:Stage I, alive, 12 days
2.5
TCGA-CC-A9FS-01A
0 years, male, asian, stage:Stage II, alive, 211 days
2.3
TCGA-2Y-A9GT-01A
0 years, male, white, stage:Stage I, dead, 1624 days
2.1
TCGA-DD-A1EC-01A
0 years, female, white, stage:Stage I, alive, 602 days
2.0
TCGA-ED-A82E-01A
0 years, female, asian, stage:Stage IIIA, alive, 408 days
1.9
TCGA-XR-A8TD-01A
0 years, female, white, stage:Stage IIIB, alive, 1030 days
1.9
TCGA-WQ-A9G7-01A
0 years, female, white, stage:'--, alive, 30 days
1.8
TCGA-ED-A8O5-01A
0 years, female, asian, stage:Stage IIIA, alive, 406 days
1.8
TCGA-DD-A118-01A
0 years, female, white, stage:Stage II, alive, 3437 days
1.8
TCGA-G3-A25U-01A
0 years, female, asian, stage:Stage I, alive, 1636 days
1.7
TCGA-UB-AA0V-01A
0 years, female, white, stage:Stage I, alive, 314 days
1.5
TCGA-DD-A3A5-01A
0 years, female, white, stage:Stage III, dead, 3125 days
1.3
TCGA-ED-A7XO-01A
0 years, male, asian, stage:Stage IIIA, alive, 427 days
1.1
TCGA-DD-AADG-01A
0 years, male, asian, stage:Stage IIIA, alive, 1145 days
1.1
TCGA-DD-AAE0-01A
0 years, female, asian, stage:Stage IIIA, alive, 555 days
1.0
TCGA-2Y-A9H6-01A
0 years, female, white, stage:Stage I, alive, 357 days
0.9
TCGA-DD-A1ED-01A
0 years, male, white, stage:Stage I, alive, 2301 days
0.8
TCGA-2Y-A9H8-01A
0 years, female, white, stage:'--, dead, 633 days
0.8
TCGA-2Y-A9H7-01A
0 years, female, white, stage:Stage I, alive, 1168 days
0.8
TCGA-HP-A5N0-01A
0 years, female, stage:'--, dead, 752 days
0.7
TCGA-DD-A4NP-01A
0 years, male, white, stage:Stage I, alive, 3308 days
0.7
TCGA-WX-AA46-01A
0 years, male, white, stage:Stage II, alive, 756 days
0.7
TCGA-DD-AAVX-01A
0 years, male, asian, stage:Stage II, alive, 1718 days
0.6
TCGA-DD-A4NA-01A
0 years, female, white, stage:Stage IIIC, alive, 1008 days
0.6
TCGA-CC-A123-01A
0 years, female, asian, stage:Stage IIIA, alive, 219 days
0.5
TCGA-DD-AADD-01A
0 years, male, asian, stage:Stage I, alive, 1231 days
0.5
TCGA-DD-AAEB-01A
0 years, male, asian, stage:Stage I, alive, 478 days
0.5
TCGA-2Y-A9H3-01A
0 years, male, white, stage:Stage II, alive, 1516 days
0.5
TCGA-DD-A73G-01A
0 years, female, white, stage:Stage I, alive, 3478 days
0.5
TCGA-DD-A4NK-01A
0 years, female, white, stage:Stage IIIA, dead, 1210 days
0.5
TCGA-G3-A6UC-01A
0 years, male, white, stage:Stage IIIB, alive, 671 days
0.5
TCGA-DD-A1EF-01A
0 years, female, white, stage:Stage I, dead, 394 days
0.4
TCGA-CC-A9FW-01A
0 years, male, asian, stage:Stage IIIA, alive, 248 days
0.4
TCGA-FV-A23B-01A
0 years, female, white, stage:Stage II, dead, 1852 days
0.4
TCGA-CC-A3M9-01A
0 years, male, asian, stage:Stage IIIA, dead, 300 days
0.3
TCGA-LG-A9QC-01A
0 years, male, white, stage:Stage I, alive, 425 days
0.2
TCGA-CC-A7II-01A
0 years, male, asian, stage:Stage IIIA, alive, 399 days
0.2
TCGA-G3-AAV4-01A
0 years, female, white, stage:Stage I, dead, 27 days
0.2
TCGA-BC-A10Y-01A
0 years, male, white, stage:'--, dead, 711 days
0.2
TCGA-DD-A73F-01A
0 years, female, white, stage:Stage I, alive, 1085 days
0.2
TCGA-5C-A9VG-01A
0 years, male, white, stage:Stage II, alive, 328 days
0.2
TCGA-G3-AAV6-01A
0 years, female, white, stage:Stage IIIA, dead, 65 days
0.1
TCGA-DD-A11C-01A
0 years, male, white, stage:Stage I, alive, 662 days
0.1
TCGA-DD-AACD-01A
0 years, male, asian, stage:Stage I, dead, 381 days
0.1
TCGA-DD-A39W-01A
0 years, female, white, stage:Stage III, dead, 827 days
0.1
TCGA-BC-A3KF-01A
0 years, female, white, stage:Stage I, alive, 8 days
0.1
TCGA-QA-A7B7-01A
0 years, male, black or african american, stage:Stage II, alive, 94 days
0.1
TCGA-DD-A3A2-01A
0 years, female, white, stage:Stage I, dead, 2131 days
0.1
TCGA-DD-A3A6-01A
0 years, female, white, stage:Stage II, dead, 3258 days
0.0
TCGA-NI-A4U2-01A
0 years, male, white, stage:Stage IIIA, dead, 1791 days
0.0
TCGA-XR-A8TF-01A
0 years, male, white, stage:Stage I, dead, 693 days
0.0
TCGA-DD-A73C-01A
0 years, female, white, stage:Stage IIIA, alive, 701 days
0.0
TCGA-DD-AADS-01A
0 years, male, asian, stage:Stage I, alive, 474 days
0.0
TCGA-XR-A8TE-01A
0 years, male, white, stage:Stage IIIA, alive, 925 days
0.0
TCGA-DD-A1EB-01A
0 years, female, stage:Stage I, alive, 2017 days
0.0
TCGA-G3-A7M5-01A
0 years, male, asian, stage:Stage I, alive, 447 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
AKR1B10 is not prognostic in Liver Hepatocellular Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
595.8
Number of samples
231
Samples
Sample
Description
TPM
DO23519
0 years, male, NA, stage:3, alive, 630 days
7134.9
DO45145
0 years, male, NA, stage:3, dead, 60 days
4275.2
DO23540
0 years, male, NA, stage:1, alive, 750 days
3635.2
DO50804
0 years, male, NA, stage:2, alive, 720 days
3604.7
DO45137
0 years, male, NA, stage:1, alive, 1320 days
3342.6
DO50798
0 years, male, NA, stage:3, dead, 30 days
3225.4
DO45201
0 years, male, NA, stage:1, alive, 900 days
2992.2
DO50850
0 years, male, NA, stage:3, alive, 720 days
2780.7
DO45123
0 years, female, NA, stage:2, dead, 570 days
2745.7
DO50822
0 years, male, NA, stage:2, alive, 510 days
2735.6
DO48751
0 years, male, NA, stage:2, dead, 480 days
2702.5
DO23510
0 years, female, NA, stage:2, alive, 870 days
2336.9
DO45169
0 years, male, NA, stage:3, alive, 1350 days
2324.8
DO50816
0 years, male, NA, stage:2, alive, 390 days
2308.3
DO48682
0 years, female, NA, stage:3, dead, 120 days
2268.4
DO50793
0 years, male, NA, stage:4, alive, 540 days
2166.9
DO23509
0 years, male, NA, stage:3, dead, 780 days
2154.4
DO45163
0 years, male, NA, stage:2, alive, 960 days
2061.3
DO45093
0 years, male, NA, stage:2, dead, 720 days
2056.1
DO23508
0 years, female, NA, stage:2, alive, 390 days
2005.0
DO50805
0 years, male, NA, stage:2, alive, 690 days
1886.3
DO45165
0 years, male, NA, stage:2, alive, 690 days
1861.8
DO48704
0 years, female, NA, stage:3, alive, 750 days
1801.3
DO48761
0 years, male, NA, stage:2, alive, 870 days
1698.9
DO23525
0 years, male, NA, stage:4, alive, 1050 days
1582.4
DO23542
0 years, male, NA, stage:3, alive, 960 days
1552.2
DO45092
0 years, male, NA, stage:4, dead, 1200 days
1492.2
DO45143
0 years, male, NA, stage:3, alive, 1290 days
1490.6
DO45209
0 years, male, NA, stage:4, alive, 1350 days
1345.9
DO45235
0 years, female, NA, stage:1, alive, 900 days
1300.3
DO50778
0 years, male, NA, stage:4, alive, 630 days
1254.0
DO45221
0 years, female, NA, stage:4, dead, 390 days
1230.7
DO23521
0 years, male, NA, stage:3, alive, 1110 days
1164.2
DO48725
0 years, male, NA, stage:1, alive, 780 days
1137.8
DO23518
0 years, male, NA, stage:2, alive, 1320 days
1132.4
DO45175
0 years, male, NA, stage:2, alive, 1140 days
1100.2
DO50776
0 years, male, NA, stage:1, alive, 690 days
1084.7
DO23541
0 years, male, NA, stage:2, alive, 930 days
1044.6
DO45157
0 years, male, NA, stage:2, alive, 1980 days
1031.6
DO45267
0 years, male, NA, stage:3, dead, 570 days
1024.2
DO45269
0 years, male, NA, stage:3, alive, 750 days
1013.7
DO50859
0 years, male, NA, stage:2, alive, 180 days
999.1
DO50808
0 years, male, NA, stage:2, alive, 570 days
979.3
DO45135
0 years, male, NA, stage:1, alive, 1410 days
967.9
DO45253
0 years, male, NA, stage:2, alive, 870 days
958.0
DO23546
0 years, male, NA, stage:2, alive, 1050 days
922.1
DO50791
0 years, female, NA, stage:1, dead, 480 days
897.5
DO45113
0 years, male, NA, stage:3, alive, 1560 days
886.6
DO48732
0 years, male, NA, stage:3, alive, 630 days
861.9
DO23539
0 years, male, NA, stage:1, alive, 1110 days
834.1
DO48728
0 years, female, NA, stage:2, alive, 150 days
830.4
DO23533
0 years, male, NA, stage:2, alive, 900 days
826.3
DO45205
0 years, female, NA, stage:2, dead, 90 days
818.8
DO45139
0 years, male, NA, stage:3, alive, 1320 days
811.5
DO48672
0 years, male, NA, stage:2, alive, 450 days
789.4
DO23548
0 years, female, NA, stage:1, alive, 840 days
787.7
DO45171
0 years, male, NA, stage:3, alive, 600 days
784.0
DO48700
0 years, female, NA, stage:2, alive, 810 days
764.6
DO45094
0 years, male, NA, stage:3, alive, 1650 days
732.2
DO48742
0 years, male, NA, stage:2, alive, 600 days
731.5
DO45183
0 years, female, NA, stage:2, dead, 570 days
724.9
DO23535
0 years, male, NA, stage:1, alive, 960 days
723.5
DO227801
0 years, female, NA, stage:1, alive, 660 days
713.1
DO50839
0 years, female, NA, stage:3, alive, 330 days
709.6
DO48716
0 years, male, NA, stage:2, alive, 720 days
707.5
DO45257
0 years, male, NA, stage:3, alive, 810 days
694.9
DO23524
0 years, female, NA, stage:2, alive, 1050 days
670.1
DO45167
0 years, male, NA, stage:2, dead, 1440 days
664.7
DO50845
0 years, male, NA, stage:3, alive, 210 days
662.6
DO50811
0 years, male, NA, stage:1, alive, 450 days
642.4
DO45225
0 years, male, NA, stage:1, alive, 1050 days
629.8
DO45207
0 years, male, NA, stage:1, alive, 1050 days
621.1
DO45213
0 years, male, NA, stage:1, alive, 1200 days
602.7
DO45229
0 years, male, NA, stage:1, alive, 990 days
578.3
DO45129
0 years, male, NA, stage:3, alive, 1470 days
574.0
DO48695
0 years, male, NA, stage:2, alive, 720 days
573.4
DO45101
0 years, male, NA, stage:2, alive, 1680 days
558.9
DO48693
0 years, male, NA, stage:2, alive, 900 days
541.9
DO50814
0 years, male, NA, stage:3, alive, 420 days
541.6
DO45281
0 years, male, NA, stage:4, alive, 750 days
540.6
DO45095
0 years, male, NA, stage:2, alive, 1620 days
538.6
DO23550
0 years, male, NA, stage:1, alive, 990 days
537.8
DO50829
0 years, male, NA, stage:3, alive, 570 days
534.7
DO50783
0 years, male, NA, stage:3, alive, 480 days
530.1
DO45243
0 years, female, NA, stage:3, alive, 930 days
524.0
DO45141
0 years, male, NA, stage:2, alive, 1320 days
522.1
DO48697
0 years, female, NA, stage:2, dead, 810 days
508.7
DO45191
0 years, female, NA, stage:2, alive, 1200 days
504.9
DO45283
0 years, male, NA, stage:3, alive, 510 days
504.5
DO48733
0 years, male, NA, stage:2, alive, 600 days
503.8
DO50809
0 years, male, NA, stage:3, dead, 720 days
502.2
DO45177
0 years, female, NA, stage:3, alive, 1260 days
497.4
DO23516
0 years, male, NA, stage:3, dead, 20 days
496.6
DO48757
0 years, female, NA, stage:3, alive, 480 days
471.4
DO23511
0 years, female, NA, stage:3, dead, 180 days
459.2
DO45149
0 years, female, NA, stage:2, alive, 1260 days
445.9
DO45173
0 years, male, NA, stage:3, alive, 1170 days
433.6
DO50785
0 years, male, NA, stage:4, dead, 90 days
421.1
DO48679
0 years, male, NA, stage:2, alive, 1200 days
412.3
DO50774
0 years, female, NA, stage:2, alive, 720 days
412.0
DO48743
0 years, female, NA, stage:2, alive, 570 days
407.2
DO45223
0 years, male, NA, stage:4, alive, 1020 days
404.9
DO23545
0 years, male, NA, stage:2, dead, 570 days
385.4
DO50799
0 years, female, NA, stage:2, alive, 540 days
385.1
DO48730
0 years, female, NA, stage:2, alive, 630 days
366.4
DO45109
0 years, male, NA, stage:2, alive, 1590 days
351.2
DO23512
0 years, male, NA, stage:1, alive, 1260 days
339.5
DO48701
0 years, male, NA, stage:2, alive, 780 days
332.5
DO45103
0 years, male, NA, stage:3, alive, 450 days
329.0
DO45227
0 years, female, NA, stage:2, alive, 1020 days
322.1
DO45265
0 years, male, NA, stage:3, alive, 1020 days
316.1
DO45115
0 years, male, NA, stage:2, alive, 840 days
297.8
DO45099
0 years, male, NA, stage:3, alive, 1590 days
293.6
DO45273
0 years, male, NA, stage:2, alive, 480 days
292.6
DO45159
0 years, male, NA, stage:3, alive, 1470 days
289.8
DO48736
0 years, female, NA, stage:1, alive, 600 days
287.4
DO50789
0 years, female, NA, stage:2, alive, 570 days
285.0
DO23543
0 years, male, NA, stage:2, alive, 1020 days
269.0
DO45121
0 years, male, NA, stage:3, alive, 1530 days
266.9
DO50857
0 years, male, NA, stage:2, alive, 210 days
263.1
DO23527
0 years, male, NA, stage:1, alive, 1050 days
262.4
DO50806
0 years, male, NA, stage:4, alive, 540 days
245.5
DO45219
0 years, male, NA, stage:2, alive, 1080 days
217.8
DO23526
0 years, male, NA, stage:3, alive, 1050 days
208.8
DO50803
0 years, female, NA, stage:1, alive, 540 days
208.3
DO23547
0 years, male, NA, stage:1, alive, 1020 days
205.1
DO45119
0 years, male, NA, stage:3, dead, 510 days
201.1
DO45241
0 years, male, NA, stage:1, alive, 1080 days
192.8
DO45233
0 years, male, NA, stage:3, alive, 900 days
174.8
DO23544
0 years, male, NA, stage:2, alive, 960 days
172.8
DO45239
0 years, male, NA, stage:2, alive, 870 days
169.2
DO48760
0 years, female, NA, stage:2, alive, 690 days
151.0
DO45297
0 years, female, NA, stage:4, dead, 1260 days
150.9
DO48723
0 years, male, NA, stage:1, alive, 600 days
142.6
DO50787
0 years, male, NA, stage:3, alive, 480 days
135.4
DO45107
0 years, female, NA, stage:2, alive, 1710 days
127.2
DO48746
0 years, male, NA, stage:3, alive, 570 days
112.2
DO23536
0 years, male, NA, stage:2, alive, 930 days
111.4
DO45117
0 years, female, NA, stage:2, dead, 1110 days
108.3
DO50825
0 years, male, NA, stage:2, alive, 390 days
94.3
DO45203
0 years, female, NA, stage:2, alive, 1170 days
93.3
DO45185
0 years, male, NA, stage:2, alive, 600 days
91.0
DO45133
0 years, male, NA, stage:3, dead, 660 days
90.0
DO50807
0 years, male, NA, stage:1, alive, 540 days
86.5
DO227643
0 years, male, NA, stage:2, alive, 1260 days
81.8
DO45197
0 years, male, NA, stage:2, alive, 1170 days
80.2
DO45289
0 years, female, NA, stage:3, alive, 360 days
74.8
DO48720
0 years, female, NA, stage:2, alive, 570 days
70.3
DO45263
0 years, male, NA, stage:3, dead, 270 days
66.0
DO23549
0 years, male, NA, stage:3, alive, 990 days
61.6
DO50844
0 years, male, NA, stage:4, alive, 300 days
58.8
DO45153
0 years, female, NA, stage:2, alive, 1380 days
53.3
DO50813
0 years, male, NA, stage:2, alive, 420 days
52.1
DO23532
0 years, female, NA, stage:1, alive, 960 days
50.4
DO48741
0 years, male, NA, stage:3, alive, 240 days
48.5
DO45105
0 years, male, NA, stage:1, alive, 1680 days
47.6
DO48721
0 years, female, NA, stage:1, alive, 900 days
47.0
DO23552
0 years, female, NA, stage:1, alive, 810 days
44.7
DO45275
0 years, male, NA, stage:3, dead, 10 days
42.6
DO50855
0 years, male, NA, stage:2, alive, 570 days
42.5
DO48712
0 years, male, NA, stage:2, alive, 810 days
42.3
DO50820
0 years, female, NA, stage:3, alive, 510 days
41.7
DO23515
0 years, male, NA, stage:2, alive, 1230 days
40.3
DO45161
0 years, male, NA, stage:2, dead, 540 days
38.8
DO50802
0 years, male, NA, stage:2, alive, 930 days
35.6
DO45261
0 years, male, NA, stage:3, alive, 990 days
35.2
DO45279
0 years, male, NA, stage:3, alive, 1290 days
33.2
DO45245
0 years, female, NA, stage:2, dead, 240 days
32.0
DO23528
0 years, female, NA, stage:2, alive, 1020 days
29.7
DO50840
0 years, male, NA, stage:2, alive, 330 days
28.1
DO45097
0 years, male, NA, stage:3, alive, 1620 days
27.3
DO23538
0 years, male, NA, stage:2, alive, 450 days
25.6
DO23517
0 years, male, NA, stage:2, alive, 1200 days
24.7
DO45179
0 years, female, NA, stage:2, alive, 600 days
23.8
DO45231
0 years, male, NA, stage:2, alive, 930 days
22.7
DO50815
0 years, male, NA, stage:3, alive, 150 days
22.7
DO23530
0 years, male, NA, stage:4, dead, 180 days
20.8
DO45217
0 years, female, NA, stage:3, dead, 270 days
20.2
DO45193
0 years, female, NA, stage:4, dead, 120 days
19.3
DO48759
0 years, male, NA, stage:3, alive, 720 days
15.3
DO45303
0 years, female, NA, stage:3, alive, 990 days
14.9
DO45131
0 years, male, NA, stage:4, dead, 360 days
14.6
DO45215
0 years, male, NA, stage:2, alive, 1170 days
14.5
DO50818
0 years, male, NA, stage:2, alive, 510 days
12.9
DO45211
0 years, male, NA, stage:3, alive, 240 days
12.0
DO45287
0 years, male, NA, stage:1, alive, 390 days
10.6
DO45255
0 years, male, NA, stage:3, alive, 720 days
10.4
DO45249
0 years, male, NA, stage:1, alive, 630 days
9.8
DO45181
0 years, female, NA, stage:2, alive, 1200 days
8.9
DO45247
0 years, female, NA, stage:2, alive, 210 days
8.2
DO45307
0 years, female, NA, stage:4, dead, 240 days
7.3
DO45299
0 years, female, NA, stage:1, alive, 1440 days
6.7
DO48706
0 years, male, NA, stage:2, alive, 870 days
6.3
DO45301
0 years, male, NA, stage:2, dead, 1440 days
6.3
DO45305
0 years, male, NA, stage:4, alive, 300 days
5.6
DO45155
0 years, male, NA, stage:2, alive, 2160 days
5.5
DO45096
0 years, male, NA, stage:2, dead, 1290 days
4.7
DO45189
0 years, female, NA, stage:2, alive, 1200 days
4.1
DO48715
0 years, female, NA, stage:2, dead, 690 days
3.8
DO23551
0 years, male, NA, stage:3, dead, 150 days
3.8
DO48674
0 years, male, NA, stage:2, alive, 1260 days
3.5
DO45251
0 years, female, NA, stage:2, alive, 900 days
3.4
DO45187
0 years, female, NA, stage:1, alive, 1260 days
3.2
DO45195
0 years, male, NA, stage:1, alive, 390 days
2.4
DO48747
0 years, male, NA, stage:3, alive, 540 days
2.2
DO48717
0 years, male, NA, stage:4, dead, 180 days
2.0
DO45285
0 years, male, NA, stage:3, alive, 480 days
1.4
DO48737
0 years, male, NA, stage:1, alive, 720 days
1.3
DO23514
0 years, male, NA, stage:2, alive, 1290 days
1.1
DO50832
0 years, male, NA, stage:3, alive, 90 days
1.0
DO45259
0 years, male, NA, stage:3, alive, 330 days
1.0
DO45277
0 years, male, NA, stage:3, alive, 600 days
0.9
DO50800
0 years, male, NA, stage:2, alive, 510 days
0.9
DO48727
0 years, female, NA, stage:2, dead, 390 days
0.7
DO45091
0 years, male, NA, stage:2, dead, 1320 days
0.7
DO50817
0 years, male, NA, stage:2, alive, 390 days
0.6
DO23531
0 years, female, NA, stage:3, alive, 900 days
0.5
DO45199
0 years, female, NA, stage:2, alive, 1350 days
0.5
DO23534
0 years, male, NA, stage:2, alive, 840 days
0.5
DO45125
0 years, male, NA, stage:3, alive, 1680 days
0.4
DO23529
0 years, male, NA, stage:4, alive, 930 days
0.3
DO50819
0 years, female, NA, stage:2, alive, 510 days
0.3
DO23513
0 years, male, NA, stage:3, alive, 1200 days
0.2
DO45127
0 years, male, NA, stage:3, dead, 420 days
0.2
DO23523
0 years, male, NA, stage:3, alive, 1080 days
0.1
DO48719
0 years, male, NA, stage:2, alive, 690 days
0.1
DO45111
0 years, male, NA, stage:2, alive, 1590 days
0.1
DO48677
0 years, male, NA, stage:3, alive, 1140 days
0.1
DO48681
0 years, male, NA, stage:2, alive, 900 days
0.1
DO45237
0 years, male, NA, stage:2, alive, 900 days
0.1
DO23537
0 years, male, NA, stage:2, dead, 900 days
0.0
Show allShow less
LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)
Number of samples
330
Samples
Sample ID
Sample type
nRPX
745
Tumor
2.8
267
Tumor
2.8
567
Tumor
2.5
617
Tumor
2.4
911
Tumor
2.4
573
Tumor
2.3
427
Tumor
2.2
913
Tumor
2.2
1041
Tumor
2.2
663
Tumor
2.2
537
Tumor
1.9
445
Tumor
1.9
525
Tumor
1.9
145
Tumor
1.8
455
Tumor
1.8
737
Tumor
1.7
873
Tumor
1.7
191
Tumor
1.7
1021
Tumor
1.7
515
Tumor
1.6
865
Tumor
1.6
471
Tumor
1.6
533
Tumor
1.6
493
Tumor
1.5
421
Tumor
1.5
925
Tumor
1.5
563
Tumor
1.5
857
Tumor
1.5
161
Tumor
1.4
443
Tumor
1.3
977
Tumor
1.3
527
Tumor
1.3
113
Tumor
1.2
483
Tumor
1.2
257
Tumor
1.2
213
Tumor
1.2
297
Tumor
1.1
383
Tumor
1.1
135
Tumor
1.0
125
Tumor
1.0
221
Tumor
1.0
147
Tumor
0.9
535
Tumor
0.9
375
Tumor
0.9
477
Tumor
0.8
951
Tumor
0.8
777
Tumor
0.8
137
Tumor
0.7
431
Tumor
0.6
1013
Tumor
0.6
755
Tumor
0.6
921
Tumor
0.6
185
Tumor
0.6
1045
Tumor
0.5
641
Tumor
0.5
435
Tumor
0.5
915
Tumor
0.5
423
Tumor
0.5
112
Tumor
0.4
415
Tumor
0.4
223
Tumor
0.4
523
Tumor
0.4
353
Tumor
0.4
481
Tumor
0.3
957
Tumor
0.3
473
Tumor
0.3
823
Tumor
0.3
461
Tumor
0.2
141
Tumor
0.2
212
Normal
0.2
433
Tumor
0.0
268
Normal
0.0
311
Tumor
0.0
721
Tumor
0.0
963
Tumor
0.0
553
Tumor
0.0
187
Tumor
-0.1
361
Tumor
-0.1
883
Tumor
-0.1
127
Tumor
-0.1
1031
Tumor
-0.2
923
Tumor
-0.2
343
Tumor
-0.2
444
Normal
-0.2
395
Tumor
-0.2
367
Tumor
-0.3
391
Tumor
-0.3
568
Normal
-0.4
513
Tumor
-0.5
574
Normal
-0.5
327
Tumor
-0.6
478
Normal
-0.6
214
Normal
-0.6
627
Tumor
-0.6
1043
Tumor
-0.6
881
Tumor
-0.7
664
Normal
-0.7
983
Tumor
-0.7
635
Tumor
-0.7
746
Normal
-0.7
362
Normal
-0.7
1042
Normal
-0.7
428
Normal
-0.8
618
Normal
-0.8
912
Normal
-0.8
492
Normal
-0.8
472
Normal
-0.8
222
Normal
-0.8
446
Normal
-0.8
564
Normal
-0.9
516
Normal
-0.9
534
Normal
-0.9
384
Normal
-0.9
422
Normal
-0.9
916
Normal
-0.9
861
Tumor
-0.9
192
Normal
-0.9
341
Tumor
-0.9
874
Normal
-0.9
188
Normal
-0.9
538
Normal
-0.9
162
Normal
-0.9
313
Tumor
-1.0
258
Normal
-1.0
955
Tumor
-1.0
571
Tumor
-1.0
557
Tumor
-1.0
217
Tumor
-1.0
1025
Tumor
-1.0
474
Normal
-1.0
195
Tumor
-1.0
558
Normal
-1.0
494
Normal
-1.1
136
Normal
-1.1
231
Tumor
-1.1
647
Tumor
-1.1
465
Tumor
-1.1
918
Normal
-1.1
866
Normal
-1.1
186
Normal
-1.2
497
Tumor
-1.2
528
Normal
-1.2
456
Normal
-1.2
126
Normal
-1.2
482
Normal
-1.2
1022
Normal
-1.2
262
Normal
-1.3
376
Normal
-1.3
546
Normal
-1.3
724
Normal
-1.3
952
Normal
-1.3
738
Normal
-1.3
976
Normal
-1.3
926
Normal
-1.3
884
Normal
-1.3
491
Tumor
-1.3
868
Normal
-1.3
572
Normal
-1.4
975
Tumor
-1.4
424
Normal
-1.4
756
Normal
-1.4
462
Normal
-1.4
138
Normal
-1.4
814
Normal
-1.4
355
Tumor
-1.4
114
Normal
-1.4
283
Tumor
-1.4
954
Normal
-1.4
1027
Tumor
-1.4
132
Normal
-1.4
146
Normal
-1.4
232
Normal
-1.5
142
Normal
-1.5
517
Tumor
-1.5
1032
Normal
-1.5
312
Normal
-1.5
432
Normal
-1.5
858
Normal
-1.5
298
Normal
-1.5
642
Normal
-1.5
196
Normal
-1.5
943
Tumor
-1.5
514
Normal
-1.5
867
Tumor
-1.5
271
Tumor
-1.5
451
Tumor
-1.5
864
Normal
-1.5
413
Tumor
-1.5
487
Tumor
-1.5
545
Tumor
-1.5
778
Normal
-1.5
436
Normal
-1.6
414
Normal
-1.6
817
Tumor
-1.6
284
Normal
-1.6
261
Tumor
-1.6
877
Tumor
-1.6
172
Normal
-1.6
426
Normal
-1.6
218
Normal
-1.6
524
Normal
-1.6
484
Normal
-1.6
615
Tumor
-1.6
272
Normal
-1.7
554
Normal
-1.7
813
Tumor
-1.7
148
Normal
-1.7
1026
Normal
-1.7
368
Normal
-1.7
416
Normal
-1.7
526
Normal
-1.7
878
Normal
-1.7
917
Tumor
-1.7
863
Tumor
-1.7
425
Tumor
-1.7
365
Tumor
-1.7
1028
Normal
-1.8
882
Normal
-1.8
786
Normal
-1.8
978
Normal
-1.8
498
Normal
-1.8
171
Tumor
-1.8
128
Normal
-1.8
665
Tumor
-1.8
447
Tumor
-1.8
662
Normal
-1.8
1014
Normal
-1.8
956
Normal
-1.8
862
Normal
-1.8
278
Normal
-1.8
616
Normal
-1.8
111
Normal
-1.8
434
Normal
-1.8
958
Normal
-1.8
965
Tumor
-1.9
518
Normal
-1.9
488
Normal
-1.9
672
Normal
-1.9
636
Normal
-1.9
366
Normal
-1.9
741
Tumor
-2.0
628
Normal
-2.0
984
Normal
-2.0
228
Normal
-2.0
785
Tumor
-2.0
722
Normal
-2.0
124
Normal
-2.0
666
Normal
-2.0
357
Tumor
-2.0
981
Tumor
-2.0
464
Normal
-2.1
648
Normal
-2.1
723
Tumor
-2.1
982
Normal
-2.1
922
Normal
-2.1
924
Normal
-2.1
123
Tumor
-2.1
224
Normal
-2.1
728
Normal
-2.1
452
Normal
-2.1
466
Normal
-2.1
968
Normal
-2.2
536
Normal
-2.2
824
Normal
-2.2
1046
Normal
-2.2
468
Normal
-2.2
744
Normal
-2.3
944
Normal
-2.3
448
Normal
-2.3
277
Tumor
-2.3
396
Normal
-2.3
354
Normal
-2.3
131
Tumor
-2.3
671
Tumor
-2.4
742
Normal
-2.4
342
Normal
-2.4
1015
Tumor
-2.4
852
Normal
-2.4
953
Tumor
-2.4
1016
Normal
-2.4
314
Normal
-2.4
697
Tumor
-2.5
851
Tumor
-2.5
332
Normal
-2.5
818
Normal
-2.5
1044
Normal
-2.5
463
Tumor
-2.6
816
Normal
-2.6
344
Normal
-2.6
964
Normal
-2.6
328
Normal
-2.6
467
Tumor
-2.6
358
Normal
-2.7
661
Tumor
-2.7
713
Tumor
-2.7
387
Tumor
-2.7
286
Normal
-2.7
392
Normal
-2.7
938
Normal
-2.7
698
Normal
-2.7
352
Normal
-2.8
394
Normal
-2.8
716
Normal
-2.8
685
Tumor
-2.8
227
Tumor
-2.9
211
Tumor
-2.9
386
Normal
-2.9
815
Tumor
-2.9
331
Tumor
-2.9
356
Normal
-3.0
412
Normal
-3.0
364
Normal
-3.0
966
Normal
-3.1
388
Normal
-3.1
351
Tumor
-3.1
727
Tumor
-3.2
411
Tumor
-3.3
686
Normal
-3.3
937
Tumor
-3.3
393
Tumor
-3.4
967
Tumor
-3.4
285
Tumor
-3.5
363
Tumor
-3.6
743
Tumor
-3.7
696
Normal
-3.7
695
Tumor
-3.7
714
Normal
-3.8
385
Tumor
-3.9
715
Tumor
-4.0
914
Normal
-6.3
Show allShow less
LIVER CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.