HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
RNA expressioni
Consensus:14.5 nTPM
HPA Brain:31.2 nTPM
GTEx:14.5 nTPM
FANTOM5:13.5 Scaled Tags Per Million
Pig:13.2 nTPM
Mouse:47.0 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA015327Antibody HPA018903
Glial cells Not detectedLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 31.2
Sample id Sample description nTPM
Hippocampus
nTPM: 27.6
2621 Female, age 67, right hemisphere 31.6
2148 Female, age 91, left hemisphere 29.7
1855 Male, age 76, left hemisphere 28.2
1911 Female, age 85, right hemisphere 26.8
1898 Male, age 80, left hemisphere 25.2
2529 Female, age 94, left hemisphere 23.9
Dentate gyrus
nTPM: 28.2
2530 Female, age 94, left hemisphere 30.8
1927 Female, age 91, both hemispheres 30.5
2531 Female, age 67, both hemispheres 30.4
2246 Female, age 85, both hemispheres 26.5
2010 Male, age 76, both hemispheres 26.2
2528 Male, age 74, both hemispheres 24.8
Entorhinal gyrus
nTPM: 31.2
2613 Female, age 94, left hemisphere 40.2
2764 Male, age 80, right hemisphere 33.1
2686 Male, age 75, right hemisphere 32.5
1938 Female, age 85, left hemisphere 29.2
2117 Female, age 91, right hemisphere 26.2
1787 Male, age 76, left hemisphere 25.9
Hippocampus, CA1
nTPM: 25.4
2749 Male, age 80, left hemisphere 33.1
1873 Female, age 85, both hemispheres 28.3
2527 Male, age 74, both hemispheres 25.7
2082 Female, age 91, right hemisphere 21.0
2045 Male, age 76, both hemispheres 18.9
Hippocampus, CA2
nTPM: 29.0
1963 Male, age 80, left hemisphere 40.8
2437 Female, age 94, left hemisphere 29.3
1940 Female, age 85, left hemisphere 28.2
1892 Male, age 76, both hemispheres 26.9
2113 Female, age 91, right hemisphere 25.3
2249 Male, age 74, both hemispheres 23.7
Hippocampus, CA3
nTPM: 26.6
2861 Female, age 67, both hemispheres 32.6
2137 Male, age 80, left hemisphere 31.2
2620 Female, age 94, left hemisphere 27.2
1891 Female, age 85, both hemispheres 25.3
2436 Male, age 74, both hemispheres 22.0
1867 Male, age 76, both hemispheres 21.1
Parahippocampal cortex
nTPM: 28.2
2693 Female, age 94, both hemispheres 32.2
2245 Female, age 91, both hemispheres 31.3
2532 Female, age 72, left hemisphere 31.2
1933 Female, age 85, both hemispheres 30.1
2622 Female, age 67, right hemisphere 28.5
1990 Female, age 91, right hemisphere 27.2
1850 Male, age 80, both hemispheres 26.8
2250 Female, age 67, right hemisphere 26.0
2692 Male, age 74, both hemispheres 24.4
2018 Male, age 76, both hemispheres 23.9
Perirhinal gyrus
nTPM: 29.0
2521 Female, age 94, right hemisphere 34.9
1794 Male, age 80, right hemisphere 28.7
1847 Female, age 91, left hemisphere 28.6
1841 Female, age 85, right hemisphere 27.1
2848 Male, age 76, right hemisphere 25.6
Subiculum
nTPM: 27.3
2042 Male, age 76, both hemispheres 30.0
1977 Female, age 85, both hemispheres 29.7
2729 Female, age 91, right hemisphere 28.6
1901 Male, age 80, both hemispheres 27.6
2619 Male, age 74, both hemispheres 25.3
2438 Female, age 94, left hemisphere 22.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 14.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 14.5
Samples: 197

Max nTPM: 25.8
Min nTPM: 6.0
Std nTPM: 4.2
Median nTPM: 13.9
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 25.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 24.6
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 24.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 23.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 23.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 23.1
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 23.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 22.6
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 22.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 22.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 22.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 13.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.5
FF:10169-103B7 60 years, female 13.5
FF:10153-102I9 76 years, female 13.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 13.2
Pig sample Sample description nTPM
Subiculum
nTPM: 13.3
Samples: 4

Max nTPM: 14.2
Min nTPM: 12.7
Sample A Female 12.7
Sample B Female 13.1
Sample C Male 13.1
Sample D Male 14.2
Dorsal hippocampus
nTPM: 12.6
Samples: 4

Max nTPM: 13.5
Min nTPM: 12.0
Sample A Female 12.1
Sample B Female 12.7
Sample C Male 12.0
Sample D Male 13.5
Entorhinal cortex
nTPM: 13.1
Samples: 4

Max nTPM: 14.5
Min nTPM: 12.0
Sample A Female 13.0
Sample B Female 12.0
Sample C Male 12.7
Sample D Male 14.5
Ventral hippocampus
nTPM: 12.7
Samples: 4

Max nTPM: 13.9
Min nTPM: 11.9
Sample A Female 12.5
Sample B Female 12.5
Sample C Male 13.9
Sample D Male 11.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 47.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 46.7
Samples: 4

Max nTPM: 49.0
Min nTPM: 43.9
Sample A Male 43.9
Sample B Male 49.0
Sample C Female 47.0
Sample D Female 46.7
Hippocampal formation
nTPM: 47.1
Samples: 4

Max nTPM: 48.4
Min nTPM: 45.1
Sample A Male 48.4
Sample B Male 45.1
Sample C Female 47.2
Sample D Female 47.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
69734566 Antisense, RP_050503_01_B09, Mouse strain C57BL/6J (56 days, male) 2.6

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