HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
RNA expressioni
Consensus:3.6 nTPM
HPA Brain:0.9 nTPM
GTEx:3.6 nTPM
FANTOM5:16.2 Scaled Tags Per Million
Pig:14.1 nTPM
Mouse:1.0 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB016685Antibody CAB022077
Glial cells HighLow
Neuronal cells HighLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max subtype nTPMi 0.9
Sample id Sample description nTPM
Hippocampus
nTPM: 0.7
2148 Female, age 91, left hemisphere 1.1
2529 Female, age 94, left hemisphere 1.0
2621 Female, age 67, right hemisphere 0.9
1898 Male, age 80, left hemisphere 0.8
1911 Female, age 85, right hemisphere 0.5
1855 Male, age 76, left hemisphere 0.2
Dentate gyrus
nTPM: 0.6
2530 Female, age 94, left hemisphere 1.4
1927 Female, age 91, both hemispheres 1.0
2528 Male, age 74, both hemispheres 0.9
2010 Male, age 76, both hemispheres 0.5
2246 Female, age 85, both hemispheres 0.1
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 0.5
2117 Female, age 91, right hemisphere 1.2
2764 Male, age 80, right hemisphere 1.0
1938 Female, age 85, left hemisphere 0.5
2613 Female, age 94, left hemisphere 0.1
1787 Male, age 76, left hemisphere 0.0
2686 Male, age 75, right hemisphere 0.0
Hippocampus, CA1
nTPM: 0.6
2045 Male, age 76, both hemispheres 1.0
2082 Female, age 91, right hemisphere 0.6
1873 Female, age 85, both hemispheres 0.5
2527 Male, age 74, both hemispheres 0.4
2749 Male, age 80, left hemisphere 0.3
Hippocampus, CA2
nTPM: 0.6
1940 Female, age 85, left hemisphere 1.7
2249 Male, age 74, both hemispheres 0.8
1963 Male, age 80, left hemisphere 0.6
1892 Male, age 76, both hemispheres 0.3
2113 Female, age 91, right hemisphere 0.2
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 0.9
2436 Male, age 74, both hemispheres 1.8
1867 Male, age 76, both hemispheres 1.6
2137 Male, age 80, left hemisphere 1.1
1891 Female, age 85, both hemispheres 0.7
2620 Female, age 94, left hemisphere 0.2
2861 Female, age 67, both hemispheres 0.2
Parahippocampal cortex
nTPM: 0.4
1990 Female, age 91, right hemisphere 0.8
1933 Female, age 85, both hemispheres 0.6
2692 Male, age 74, both hemispheres 0.6
2018 Male, age 76, both hemispheres 0.5
2532 Female, age 72, left hemisphere 0.5
2250 Female, age 67, right hemisphere 0.4
2693 Female, age 94, both hemispheres 0.4
1850 Male, age 80, both hemispheres 0.2
2245 Female, age 91, both hemispheres 0.2
2622 Female, age 67, right hemisphere 0.0
Perirhinal gyrus
nTPM: 0.3
1841 Female, age 85, right hemisphere 0.6
1794 Male, age 80, right hemisphere 0.4
2848 Male, age 76, right hemisphere 0.4
1847 Female, age 91, left hemisphere 0.2
2521 Female, age 94, right hemisphere 0.0
Subiculum
nTPM: 0.4
2042 Male, age 76, both hemispheres 0.9
2729 Female, age 91, right hemisphere 0.8
1977 Female, age 85, both hemispheres 0.4
2619 Male, age 74, both hemispheres 0.2
1901 Male, age 80, both hemispheres 0.1
2438 Female, age 94, left hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Max subtype nTPMi 3.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 3.6
Samples: 197

Max nTPM: 7.5
Min nTPM: 1.2
Std nTPM: 1.0
Median nTPM: 3.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 7.5
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 6.8
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 6.4
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 6.1
GTEX-NPJ8-0011-R1a-SM-33HCB 40-49 years, male 6.0
GTEX-1GZHY-0011-R1a-SM-CE6RR 50-59 years, female 6.0
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 5.8
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 5.8
GTEX-14LZ3-0011-R1a-SM-69LP5 60-69 years, female 5.8
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 5.7
GTEX-1H1DG-0011-R1b-SM-CKZP1 70-79 years, male 5.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max subtype Scaled Tags Per Millioni 16.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.2
FF:10169-103B7 60 years, female 17.6
FF:10153-102I9 76 years, female 14.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Max subtype nTPMi 14.1
Pig sample Sample description nTPM
Subiculum
nTPM: 12.3
Samples: 4

Max nTPM: 14.5
Min nTPM: 8.9
Sample A Female 13.0
Sample B Female 8.9
Sample C Male 12.9
Sample D Male 14.5
Dorsal hippocampus
nTPM: 9.5
Samples: 4

Max nTPM: 11.5
Min nTPM: 7.5
Sample A Female 9.7
Sample B Female 7.5
Sample C Male 11.5
Sample D Male 9.2
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 15.8
Min nTPM: 12.9
Sample A Female 12.9
Sample B Female 13.0
Sample C Male 15.8
Sample D Male 14.9
Ventral hippocampus
nTPM: 10.1
Samples: 4

Max nTPM: 11.5
Min nTPM: 8.6
Sample A Female 11.5
Sample B Female 8.6
Sample C Male 9.2
Sample D Male 11.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Max subtype nTPMi 1.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.0
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.8
Sample A Male 0.8
Sample B Male 1.1
Sample C Female 1.4
Sample D Female 0.8
Hippocampal formation
nTPM: 0.9
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.7
Sample A Male 1.0
Sample B Male 0.8
Sample C Female 0.7
Sample D Female 1.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max subtype Expression energyi 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
69549325 Antisense, RP_050201_01_F07, Mouse strain C57BL/6J (56 days, male) 0.0

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