Expression of ERO1A in liver cancer - The Human Protein Atlas

LIVER HEPATOCELLULAR CARCINOMA (TCGA) - Interactive survival scatter plotⁱ

The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.

The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".

Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.

Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.

& Survival analysisⁱ

ERO1A is potential prognostic, high expression is unfavorable in Liver Hepatocellular Carcinoma (TCGA)

Stage:

Survival analysis

Current cut offⁱ :

Best expression cut offⁱ : 18.96

Median expressionⁱ : N/A

Median follow up timeⁱ : N/A

P scoreⁱ N/A

5-year survival highⁱ N/A

5-year survival lowⁱ N/A

TCGA RNA samplesⁱ

Average TPM

15.6

Number of samples

362

Samples

Sample	Description	TPM
TCGA-DD-A4NA-01A	0 years, female, white, stage:Stage IIIC, alive, 1008 days	161.8
TCGA-CC-5263-01A	0 years, male, asian, stage:Stage IIIA, dead, 129 days	73.9
TCGA-CC-5261-01A	0 years, male, asian, stage:Stage II, dead, 97 days	68.2
TCGA-CC-A3M9-01A	0 years, male, asian, stage:Stage IIIA, dead, 300 days	62.4
TCGA-ED-A97K-01A	0 years, male, asian, stage:Stage IIIA, alive, 6 days	61.7
TCGA-FV-A3I0-01A	0 years, female, white, stage:Stage II, alive, 848 days	60.6
TCGA-CC-5260-01A	0 years, female, asian, stage:Stage IIIC, dead, 87 days	56.5
TCGA-GJ-A6C0-01A	0 years, female, white, stage:Stage II, dead, 31 days	56.3
TCGA-BC-A10U-01A	0 years, male, white, stage:'--, dead, 837 days	50.2
TCGA-RC-A6M6-01A	0 years, male, white, stage:Stage II, alive, 9 days	45.8
TCGA-K7-AAU7-01A	0 years, male, white, stage:Stage II, alive, 359 days	43.5
TCGA-G3-AAV7-01A	0 years, male, asian, stage:Stage II, alive, 361 days	43.3
TCGA-DD-AAED-01A	0 years, male, asian, stage:Stage I, alive, 763 days	41.4
TCGA-BC-A10Q-01A	0 years, female, white, stage:'--, dead, 1135 days	40.5
TCGA-DD-A4NH-01A	0 years, female, white, stage:Stage IIIB, alive, 917 days	40.4
TCGA-DD-AADW-01A	0 years, male, asian, stage:Stage I, alive, 587 days	40.1
TCGA-DD-AAD1-01A	0 years, female, asian, stage:Stage I, alive, 564 days	37.8
TCGA-2Y-A9H2-01A	0 years, female, white, stage:Stage I, alive, 1731 days	37.2
TCGA-ED-A66Y-01A	0 years, female, asian, stage:Stage IIIA, dead, 296 days	36.5
TCGA-DD-A1EH-01A	0 years, male, white, stage:Stage III, alive, 1495 days	35.9
TCGA-DD-AAVW-01A	0 years, male, asian, stage:Stage I, alive, 2317 days	35.6
TCGA-CC-A9FW-01A	0 years, male, asian, stage:Stage IIIA, alive, 248 days	33.8
TCGA-DD-A4NQ-01A	0 years, male, white, stage:Stage II, dead, 373 days	32.5
TCGA-G3-A5SJ-01A	0 years, male, white, stage:Stage I, alive, 698 days	32.1
TCGA-DD-A4NJ-01A	0 years, female, white, stage:Stage II, alive, 928 days	31.6
TCGA-CC-5264-01A	0 years, male, asian, stage:Stage IIIA, dead, 102 days	31.6
TCGA-DD-AACN-01A	0 years, male, asian, stage:Stage I, alive, 1302 days	30.5
TCGA-DD-A1EK-01A	0 years, female, white, stage:Stage IVB, dead, 558 days	30.5
TCGA-BC-A3KG-01A	0 years, female, white, stage:Stage II, alive, 680 days	30.1
TCGA-G3-A7M6-01A	0 years, female, white, stage:Stage I, alive, 632 days	29.3
TCGA-2Y-A9H5-01A	0 years, female, white, stage:Stage I, dead, 555 days	29.1
TCGA-ED-A7PX-01A	0 years, female, asian, stage:Stage II, alive, 6 days	29.0
TCGA-WX-AA44-01A	0 years, female, white, stage:Stage I, alive, 615 days	28.4
TCGA-ED-A5KG-01A	0 years, female, asian, stage:Stage II, alive, 854 days	27.4
TCGA-DD-AACX-01A	0 years, male, asian, stage:Stage II, alive, 170 days	26.8
TCGA-DD-AAVS-01A	0 years, male, asian, stage:Stage I, alive, 1823 days	26.8
TCGA-ED-A8O6-01A	0 years, female, asian, stage:Stage IIIA, dead, 56 days	26.0
TCGA-G3-A25Y-01A	0 years, female, asian, stage:Stage I, dead, 452 days	25.7
TCGA-DD-AACP-01A	0 years, male, asian, stage:Stage I, alive, 415 days	25.5
TCGA-BC-A10W-01A	0 years, male, asian, stage:'--, dead, 91 days	25.4
TCGA-DD-A114-01A	0 years, male, black or african american, stage:Stage II, dead, 1149 days	24.8
TCGA-ED-A7PZ-01A	0 years, male, asian, stage:Stage II, alive, 6 days	24.7
TCGA-DD-A1EC-01A	0 years, female, white, stage:Stage I, alive, 602 days	24.6
TCGA-EP-A2KA-01A	0 years, female, white, stage:Stage IIIA, dead, 627 days	23.9
TCGA-5C-A9VH-01A	0 years, male, white, stage:Stage I, alive, 322 days	23.5
TCGA-FV-A2QR-01A	0 years, male, white, stage:Stage I, dead, 581 days	23.5
TCGA-DD-AADY-01A	0 years, female, asian, stage:Stage I, alive, 555 days	23.3
TCGA-XR-A8TE-01A	0 years, male, white, stage:Stage IIIA, alive, 925 days	23.3
TCGA-PD-A5DF-01A	0 years, female, white, stage:Stage IIIB, dead, 639 days	23.2
TCGA-FV-A3I1-01A	0 years, female, white, stage:Stage II, dead, 247 days	23.1
TCGA-DD-AADC-01A	0 years, male, asian, stage:Stage I, dead, 425 days	23.1
TCGA-BC-A217-01A	0 years, female, white, stage:Stage II, dead, 1397 days	23.0
TCGA-DD-A39Y-01A	0 years, male, asian, stage:Stage I, dead, 171 days	22.6
TCGA-DD-AACK-01A	0 years, male, asian, stage:Stage I, alive, 9 days	22.6
TCGA-DD-AAVZ-01A	0 years, male, asian, stage:Stage I, alive, 1900 days	22.4
TCGA-ZP-A9D2-01A	0 years, male, white, stage:'--, dead, 765 days	22.2
TCGA-YA-A8S7-01A	0 years, male, white, stage:Stage IIIA, dead, 412 days	22.0
TCGA-DD-A1EJ-01A	0 years, female, white, stage:Stage IIIC, dead, 1005 days	22.0
TCGA-DD-AAD8-01A	0 years, female, asian, stage:Stage I, alive, 1219 days	21.7
TCGA-ED-A7PY-01A	0 years, female, asian, stage:Stage II, alive, 390 days	21.7
TCGA-DD-AACL-01A	0 years, female, asian, stage:Stage I, dead, 107 days	21.6
TCGA-DD-A4NE-01A	0 years, female, white, stage:Stage IIIA, dead, 660 days	21.6
TCGA-XR-A8TC-01A	0 years, female, white, stage:Stage I, alive, 1339 days	21.5
TCGA-UB-A7ME-01A	0 years, male, asian, stage:Stage I, alive, 486 days	21.4
TCGA-CC-A1HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 101 days	21.4
TCGA-DD-AAVQ-01A	0 years, male, asian, stage:Stage I, alive, 2728 days	21.3
TCGA-UB-AA0U-01A	0 years, male, white, stage:Stage II, alive, 327 days	21.3
TCGA-DD-AAE6-01A	0 years, female, asian, stage:Stage I, alive, 141 days	21.3
TCGA-DD-A11B-01A	0 years, male, white, stage:Stage I, dead, 14 days	21.0
TCGA-CC-5262-01A	0 years, male, asian, stage:Stage IIIC, dead, 103 days	21.0
TCGA-BC-A8YO-01A	0 years, female, white, stage:Stage IIIC, alive, 562 days	21.0
TCGA-DD-AACH-01A	0 years, male, asian, stage:Stage II, dead, 195 days	20.9
TCGA-BC-A112-01A	0 years, male, white, stage:'--, dead, 153 days	20.9
TCGA-CC-A8HT-01A	0 years, male, asian, stage:Stage IIIA, dead, 140 days	20.5
TCGA-ED-A66X-01A	0 years, male, asian, stage:Stage IIIA, alive, 406 days	20.4
TCGA-LG-A6GG-01A	0 years, female, white, stage:Stage II, alive, 387 days	20.2
TCGA-DD-AADI-01A	0 years, female, asian, stage:Stage I, alive, 1085 days	20.2
TCGA-MI-A75C-01A	0 years, male, white, stage:Stage I, alive, 291 days	20.1
TCGA-DD-AAD0-01A	0 years, female, asian, stage:Stage I, alive, 137 days	20.0
TCGA-DD-A4NG-01A	0 years, male, white, stage:Stage IIIA, dead, 802 days	19.8
TCGA-FV-A23B-01A	0 years, female, white, stage:Stage II, dead, 1852 days	19.8
TCGA-ED-A459-01A	0 years, male, asian, stage:Stage II, alive, 910 days	19.6
TCGA-CC-A9FS-01A	0 years, male, asian, stage:Stage II, alive, 211 days	19.6
TCGA-ZS-A9CF-01A	0 years, male, white, stage:Stage II, alive, 2412 days	19.5
TCGA-G3-A7M9-01A	0 years, male, white, stage:Stage IIIB, dead, 56 days	19.4
TCGA-DD-AADP-01A	0 years, male, asian, stage:Stage I, alive, 458 days	19.4
TCGA-DD-A4NR-01A	0 years, female, white, stage:Stage I, dead, 9 days	19.4
TCGA-ZP-A9D1-01A	0 years, female, white, stage:'--, alive, 21 days	19.4
TCGA-DD-AAE0-01A	0 years, female, asian, stage:Stage IIIA, alive, 555 days	19.3
TCGA-GJ-A9DB-01A	0 years, male, white, stage:Stage I, dead, 67 days	19.3
TCGA-2Y-A9GS-01A	0 years, male, white, stage:'--, dead, 724 days	19.2
TCGA-DD-A4NN-01A	0 years, female, white, stage:Stage I, dead, 899 days	19.1
TCGA-DD-A1EE-01A	0 years, male, white, stage:Stage IIIA, dead, 349 days	19.0
TCGA-CC-A7IE-01A	0 years, male, asian, stage:Stage IIIA, dead, 217 days	19.0
TCGA-ED-A7XP-01A	0 years, female, asian, stage:Stage II, alive, 400 days	18.9
TCGA-WJ-A86L-01A	0 years, female, white, stage:Stage I, alive, 345 days	18.8
TCGA-2Y-A9GW-01A	0 years, male, white, stage:Stage I, dead, 1271 days	18.2
TCGA-RC-A7SH-01A	0 years, male, asian, stage:Stage II, alive, 468 days	18.2
TCGA-G3-A3CG-01A	0 years, male, white, stage:Stage I, alive, 673 days	18.0
TCGA-WQ-A9G7-01A	0 years, female, white, stage:'--, alive, 30 days	17.8
TCGA-UB-A7MA-01A	0 years, female, white, stage:Stage II, alive, 848 days	17.8
TCGA-DD-AAD5-01A	0 years, male, asian, stage:Stage I, alive, 1345 days	17.4
TCGA-G3-AAV6-01A	0 years, female, white, stage:Stage IIIA, dead, 65 days	17.3
TCGA-DD-AAD6-01A	0 years, male, asian, stage:Stage IIIA, alive, 672 days	17.2
TCGA-FV-A2QQ-01A	0 years, male, white, stage:Stage I, alive, 729 days	17.1
TCGA-ZP-A9CV-01A	0 years, male, white, stage:'--, dead, 1088 days	17.1
TCGA-DD-AAW0-01A	0 years, male, asian, stage:Stage I, alive, 2015 days	16.8
TCGA-FV-A3R2-01A	0 years, male, white, stage:Stage I, dead, 194 days	16.6
TCGA-2Y-A9GY-01A	0 years, female, white, stage:Stage II, dead, 757 days	16.3
TCGA-UB-A7MB-01A	0 years, male, white, stage:Stage II, alive, 601 days	16.1
TCGA-G3-A25X-01A	0 years, male, asian, stage:Stage II, alive, 1779 days	16.1
TCGA-BC-A216-01A	0 years, female, white, stage:Stage IIIA, alive, 1351 days	16.0
TCGA-DD-AACW-01A	0 years, male, asian, stage:Stage I, alive, 1424 days	16.0
TCGA-ZP-A9D0-01A	0 years, female, black or african american, stage:'--, alive, 1091 days	16.0
TCGA-LG-A9QC-01A	0 years, male, white, stage:Stage I, alive, 425 days	15.9
TCGA-DD-A3A4-01A	0 years, male, white, stage:Stage IIIA, dead, 612 days	15.9
TCGA-CC-A5UE-01A	0 years, male, asian, stage:Stage IIIB, dead, 272 days	15.8
TCGA-MI-A75I-01A	0 years, male, black or african american, stage:'--, alive, 630 days	15.6
TCGA-2Y-A9HA-01A	0 years, male, white, stage:Stage II, dead, 36 days	15.5
TCGA-DD-A1EA-01A	0 years, male, asian, stage:Stage II, alive, 2415 days	15.5
TCGA-CC-5258-01A	0 years, male, asian, stage:Stage II, dead, 129 days	15.5
TCGA-ED-A82E-01A	0 years, female, asian, stage:Stage IIIA, alive, 408 days	15.3
TCGA-G3-A25T-01A	0 years, female, white, stage:Stage IIIA, alive, 1553 days	15.3
TCGA-EP-A12J-01A	0 years, male, black or african american, stage:Stage I, alive, 570 days	15.3
TCGA-ZP-A9CY-01A	0 years, female, white, stage:'--, alive, 782 days	15.2
TCGA-K7-A5RG-01A	0 years, male, black or african american, stage:Stage I, alive, 519 days	15.1
TCGA-ED-A8O5-01A	0 years, female, asian, stage:Stage IIIA, alive, 406 days	15.1
TCGA-2Y-A9H0-01A	0 years, male, white, stage:Stage IIIA, alive, 3675 days	15.0
TCGA-DD-AAEA-01A	0 years, male, asian, stage:Stage I, alive, 575 days	14.9
TCGA-DD-AACU-01A	0 years, male, asian, stage:Stage I, alive, 1567 days	14.9
TCGA-GJ-A3OU-01A	0 years, male, white, stage:Stage I, alive, 879 days	14.8
TCGA-DD-A4ND-01A	0 years, female, white, stage:Stage I, alive, 2746 days	14.8
TCGA-DD-AAEK-01A	0 years, male, asian, stage:Stage II, alive, 1067 days	14.8
TCGA-FV-A4ZQ-01A	0 years, male, white, stage:Stage I, alive, 12 days	14.7
TCGA-BC-A10Y-01A	0 years, male, white, stage:'--, dead, 711 days	14.7
TCGA-DD-A73B-01A	0 years, female, white, stage:Stage I, dead, 283 days	14.7
TCGA-CC-A3MC-01A	0 years, male, asian, stage:Stage IIIA, alive, 363 days	14.7
TCGA-DD-AAE1-01A	0 years, male, asian, stage:Stage I, alive, 552 days	14.6
TCGA-XR-A8TD-01A	0 years, female, white, stage:Stage IIIB, alive, 1030 days	14.6
TCGA-QA-A7B7-01A	0 years, male, black or african american, stage:Stage II, alive, 94 days	14.5
TCGA-FV-A3R3-01A	0 years, female, white, stage:Stage I, dead, 366 days	14.5
TCGA-G3-A3CK-01A	0 years, male, asian, stage:Stage I, alive, 585 days	14.4
TCGA-ZP-A9CZ-01A	0 years, male, asian, stage:'--, alive, 706 days	14.4
TCGA-BD-A3EP-01A	0 years, female, black or african american, stage:Stage I, alive, 409 days	14.4
TCGA-3K-AAZ8-01A	0 years, male, black or african american, stage:Stage IIIB, alive, 396 days	14.3
TCGA-G3-A5SI-01A	0 years, male, asian, stage:Stage II, dead, 768 days	14.3
TCGA-DD-AADA-01A	0 years, female, asian, stage:Stage I, alive, 1233 days	14.3
TCGA-ED-A627-01A	0 years, male, white, stage:Stage I, alive, 423 days	14.3
TCGA-DD-A11D-01A	0 years, female, white, stage:Stage I, dead, 1560 days	14.2
TCGA-UB-A7MF-01A	0 years, male, white, stage:Stage IIIA, dead, 214 days	14.1
TCGA-G3-A3CH-01A	0 years, male, asian, stage:Stage IIIA, alive, 780 days	14.1
TCGA-DD-A4NF-01A	0 years, male, white, stage:Stage I, alive, 942 days	13.8
TCGA-DD-A1EL-01A	0 years, male, black or african american, stage:Stage II, dead, 415 days	13.8
TCGA-DD-AAD2-01A	0 years, male, asian, stage:Stage I, alive, 658 days	13.8
TCGA-DD-AACZ-01A	0 years, female, asian, stage:Stage I, dead, 171 days	13.6
TCGA-CC-A5UD-01A	0 years, male, asian, stage:Stage IIIA, dead, 304 days	13.5
TCGA-G3-AAV4-01A	0 years, female, white, stage:Stage I, dead, 27 days	13.5
TCGA-BW-A5NO-01A	0 years, male, black or african american, stage:Stage IIIA, alive, 20 days	13.5
TCGA-BC-A10Z-01A	0 years, female, white, stage:Stage I, dead, 34 days	13.5
TCGA-DD-A115-01A	0 years, male, white, stage:Stage IIIA, dead, 2542 days	13.4
TCGA-DD-A113-01A	0 years, female, white, stage:Stage II, alive, 2425 days	13.3
TCGA-DD-AAEH-01A	0 years, male, asian, stage:Stage I, alive, 784 days	13.2
TCGA-RC-A7SF-01A	0 years, male, asian, stage:Stage I, alive, 579 days	13.2
TCGA-DD-A4NS-01A	0 years, female, white, stage:Stage I, dead, 2456 days	13.1
TCGA-UB-A7MD-01A	0 years, male, black or african american, stage:Stage I, dead, 52 days	13.0
TCGA-DD-AAD3-01A	0 years, male, asian, stage:Stage I, alive, 1295 days	13.0
TCGA-DD-AADV-01A	0 years, male, asian, stage:Stage I, alive, 574 days	12.9
TCGA-DD-AADQ-01A	0 years, male, asian, stage:Stage II, alive, 436 days	12.9
TCGA-DD-AACA-01A	0 years, male, asian, stage:Stage I, alive, 2301 days	12.8
TCGA-BC-A10T-01A	0 years, male, white, stage:'--, dead, 837 days	12.8
TCGA-G3-A5SL-01A	0 years, male, white, stage:Stage II, alive, 621 days	12.8
TCGA-ZS-A9CD-01A	0 years, male, white, stage:Stage II, dead, 1386 days	12.7
TCGA-DD-A73C-01A	0 years, female, white, stage:Stage IIIA, alive, 701 days	12.6
TCGA-2Y-A9GV-01A	0 years, female, white, stage:Stage I, dead, 2532 days	12.5
TCGA-RC-A7SB-01A	0 years, male, asian, stage:Stage II, alive, 588 days	12.5
TCGA-DD-A39W-01A	0 years, female, white, stage:Stage III, dead, 827 days	12.5
TCGA-XR-A8TG-01A	0 years, male, white, stage:Stage I, alive, 898 days	12.4
TCGA-BC-A5W4-01A	0 years, male, white, stage:Stage IIIA, dead, 547 days	12.4
TCGA-EP-A2KC-01A	0 years, male, black or african american, stage:Stage I, dead, 19 days	12.3
TCGA-DD-A4NO-01A	0 years, male, white, stage:Stage I, alive, 2245 days	12.2
TCGA-DD-A4NV-01A	0 years, male, white, stage:Stage IIIA, alive, 2398 days	11.9
TCGA-BC-A10S-01A	0 years, male, white, stage:'--, dead, 1423 days	11.9
TCGA-DD-A1EG-01A	0 years, male, white, stage:Stage I, dead, 1372 days	11.8
TCGA-BD-A3ER-01A	0 years, male, white, stage:Stage II, alive, 1115 days	11.8
TCGA-DD-AA3A-01A	0 years, female, white, stage:Stage I, dead, 410 days	11.8
TCGA-BC-A10X-01A	0 years, female, white, stage:Stage IIIA, dead, 770 days	11.7
TCGA-4R-AA8I-01A	0 years, male, white, stage:Stage II, dead, 262 days	11.7
TCGA-CC-A7IJ-01A	0 years, male, asian, stage:Stage II, alive, 382 days	11.7
TCGA-DD-A73E-01A	0 years, male, white, stage:Stage I, alive, 44 days	11.7
TCGA-DD-AAVX-01A	0 years, male, asian, stage:Stage II, alive, 1718 days	11.6
TCGA-CC-A3MB-01A	0 years, male, asian, stage:Stage IIIA, dead, 315 days	11.6
TCGA-5R-AA1D-01A	0 years, female, white, stage:Stage IIIA, alive, 449 days	11.5
TCGA-MR-A520-01A	0 years, male, white, stage:Stage I, alive, 229 days	11.5
TCGA-DD-AADL-01A	0 years, male, asian, stage:Stage I, alive, 636 days	11.5
TCGA-FV-A496-01A	0 years, female, white, stage:Stage I, alive, 10 days	11.5
TCGA-DD-AADK-01A	0 years, female, asian, stage:Stage II, alive, 1049 days	11.4
TCGA-BD-A2L6-01A	0 years, male, white, stage:'--, alive, 1363 days	11.4
TCGA-2Y-A9GT-01A	0 years, male, white, stage:Stage I, dead, 1624 days	11.3
TCGA-ZS-A9CE-01A	0 years, female, white, stage:Stage II, alive, 1241 days	11.2
TCGA-CC-A3MA-01A	0 years, male, asian, stage:Stage IIIA, dead, 303 days	11.2
TCGA-HP-A5N0-01A	0 years, female, stage:'--, dead, 752 days	11.2
TCGA-UB-AA0V-01A	0 years, female, white, stage:Stage I, alive, 314 days	11.2
TCGA-DD-A73A-01A	0 years, male, white, stage:Stage I, alive, 728 days	11.2
TCGA-RC-A7SK-01A	0 years, male, asian, stage:Stage I, alive, 472 days	11.2
TCGA-G3-A25V-01A	0 years, male, white, stage:Stage I, alive, 860 days	11.1
TCGA-2Y-A9H9-01A	0 years, male, white, stage:Stage I, alive, 697 days	11.1
TCGA-O8-A75V-01A	0 years, male, stage:Stage I, alive, 538 days	10.9
TCGA-KR-A7K2-01A	0 years, male, white, stage:Stage I, alive, 829 days	10.9
TCGA-5R-AAAM-01A	0 years, female, white, stage:Stage II, dead, 46 days	10.9
TCGA-DD-AAC8-01A	0 years, male, asian, stage:Stage I, dead, 16 days	10.9
TCGA-DD-AAEI-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	10.9
TCGA-MI-A75E-01A	0 years, male, white, stage:Stage IIIC, alive, 507 days	10.9
TCGA-KR-A7K0-01A	0 years, male, white, stage:Stage I, dead, 65 days	10.8
TCGA-CC-A7IL-01A	0 years, male, asian, stage:Stage IIIA, dead, 278 days	10.8
TCGA-EP-A26S-01A	0 years, male, white, stage:Stage I, alive, 608 days	10.8
TCGA-CC-A7IF-01A	0 years, male, asian, stage:Stage IIIA, dead, 649 days	10.7
TCGA-MI-A75H-01A	0 years, male, white, stage:'--, alive, 747 days	10.7
TCGA-DD-AACF-01A	0 years, male, asian, stage:Stage I, dead, 365 days	10.7
TCGA-G3-A5SK-01A	0 years, male, white, stage:Stage I, alive, 744 days	10.7
TCGA-DD-AADR-01A	0 years, male, asian, stage:Stage I, alive, 2028 days	10.6
TCGA-2Y-A9GX-01A	0 years, male, white, stage:Stage I, alive, 2442 days	10.6
TCGA-ED-A4XI-01A	0 years, male, asian, stage:Stage II, alive, 819 days	10.6
TCGA-DD-AADB-01A	0 years, male, asian, stage:Stage I, alive, 1242 days	10.6
TCGA-DD-A4NP-01A	0 years, male, white, stage:Stage I, alive, 3308 days	10.5
TCGA-DD-A1EB-01A	0 years, female, stage:Stage I, alive, 2017 days	10.5
TCGA-5C-A9VG-01A	0 years, male, white, stage:Stage II, alive, 328 days	10.5
TCGA-DD-A11C-01A	0 years, male, white, stage:Stage I, alive, 662 days	10.4
TCGA-RG-A7D4-01A	0 years, male, black or african american, stage:Stage II, alive, 1098 days	10.4
TCGA-DD-A1ED-01A	0 years, male, white, stage:Stage I, alive, 2301 days	10.4
TCGA-T1-A6J8-01A	0 years, male, white, stage:'--, alive, 23 days	10.3
TCGA-DD-A1EI-01A	0 years, male, asian, stage:Stage I, alive, 183 days	10.3
TCGA-DD-A4NL-01A	0 years, male, white, stage:Stage I, alive, 1711 days	10.2
TCGA-G3-A25U-01A	0 years, female, asian, stage:Stage I, alive, 1636 days	10.1
TCGA-DD-A39Z-01A	0 years, female, stage:Stage II, dead, 601 days	10.1
TCGA-K7-A5RF-01A	0 years, male, white, stage:Stage I, alive, 631 days	10.0
TCGA-DD-A3A6-01A	0 years, female, white, stage:Stage II, dead, 3258 days	9.9
TCGA-DD-AADD-01A	0 years, male, asian, stage:Stage I, alive, 1231 days	9.9
TCGA-DD-AACT-01A	0 years, female, asian, stage:Stage I, alive, 1562 days	9.9
TCGA-DD-AACS-01A	0 years, male, asian, stage:Stage I, alive, 1804 days	9.8
TCGA-WX-AA47-01A	0 years, female, white, stage:Stage IIIA, dead, 556 days	9.8
TCGA-2Y-A9GZ-01A	0 years, female, white, stage:Stage II, dead, 848 days	9.8
TCGA-K7-A6G5-01A	0 years, male, white, stage:Stage I, alive, 512 days	9.8
TCGA-HP-A5MZ-01A	0 years, male, stage:Stage I, dead, 91 days	9.7
TCGA-MI-A75G-01A	0 years, male, white, stage:Stage II, alive, 698 days	9.7
TCGA-BC-A69I-01A	0 years, male, white, stage:Stage I, alive, 387 days	9.7
TCGA-2Y-A9H8-01A	0 years, female, white, stage:'--, dead, 633 days	9.6
TCGA-DD-AAVU-01A	0 years, male, asian, stage:Stage II, alive, 2202 days	9.6
TCGA-DD-A3A5-01A	0 years, female, white, stage:Stage III, dead, 3125 days	9.5
TCGA-ZP-A9D4-01A	0 years, female, white, stage:'--, alive, 395 days	9.4
TCGA-DD-AAVR-01A	0 years, male, asian, stage:Stage I, alive, 2513 days	9.4
TCGA-DD-AAW1-01A	0 years, male, asian, stage:Stage IIIA, alive, 1989 days	9.4
TCGA-DD-A3A3-01A	0 years, male, asian, stage:Stage I, dead, 535 days	9.4
TCGA-DD-A4NI-01A	0 years, male, white, stage:Stage II, alive, 816 days	9.3
TCGA-ZS-A9CG-01A	0 years, male, white, stage:Stage II, alive, 341 days	9.3
TCGA-DD-A3A8-01A	0 years, male, white, stage:Stage II, dead, 11 days	9.2
TCGA-UB-A7MC-01A	0 years, male, white, stage:Stage IIIA, alive, 500 days	9.2
TCGA-DD-A4NB-01A	0 years, male, white, stage:Stage I, alive, 989 days	9.1
TCGA-DD-A119-01A	0 years, male, asian, stage:Stage IV, dead, 223 days	9.1
TCGA-G3-A6UC-01A	0 years, male, white, stage:Stage IIIB, alive, 671 days	9.1
TCGA-G3-AAV3-01A	0 years, female, white, stage:Stage II, alive, 412 days	9.1
TCGA-2Y-A9H7-01A	0 years, female, white, stage:Stage I, alive, 1168 days	9.1
TCGA-5C-AAPD-01A	0 years, male, asian, stage:Stage II, alive, 20 days	9.0
TCGA-DD-AADU-01A	0 years, male, asian, stage:Stage II, alive, 554 days	9.0
TCGA-DD-AACQ-01A	0 years, male, asian, stage:Stage II, dead, 432 days	9.0
TCGA-MR-A8JO-01A	0 years, male, white, stage:Stage I, alive, 330 days	9.0
TCGA-DD-AADJ-01A	0 years, female, asian, stage:Stage I, alive, 1066 days	8.9
TCGA-EP-A3RK-01A	0 years, male, white, stage:Stage IIIA, alive, 363 days	8.9
TCGA-DD-AAE9-01A	0 years, male, asian, stage:Stage I, alive, 722 days	8.9
TCGA-CC-A5UC-01A	0 years, male, asian, stage:Stage IIIA, dead, 347 days	8.9
TCGA-DD-AACY-01A	0 years, male, asian, stage:Stage I, alive, 1450 days	8.9
TCGA-RC-A6M5-01A	0 years, female, white, stage:Stage IVA, alive, 15 days	8.8
TCGA-KR-A7K7-01A	0 years, female, white, stage:Stage II, alive, 951 days	8.7
TCGA-DD-AAE3-01A	0 years, male, asian, stage:Stage I, alive, 566 days	8.7
TCGA-2Y-A9H6-01A	0 years, female, white, stage:Stage I, alive, 357 days	8.7
TCGA-BC-A10R-01A	0 years, female, white, stage:'--, dead, 308 days	8.7
TCGA-BC-A3KF-01A	0 years, female, white, stage:Stage I, alive, 8 days	8.6
TCGA-KR-A7K8-01A	0 years, male, stage:Stage I, alive, 906 days	8.6
TCGA-CC-A7II-01A	0 years, male, asian, stage:Stage IIIA, alive, 399 days	8.6
TCGA-DD-AAVY-01A	0 years, male, asian, stage:Stage IIIA, alive, 1970 days	8.5
TCGA-CC-A7IK-01A	0 years, male, asian, stage:Stage IIIA, dead, 262 days	8.5
TCGA-2Y-A9HB-01A	0 years, male, stage:Stage I, alive, 260 days	8.5
TCGA-NI-A8LF-01A	0 years, male, white, stage:Stage I, alive, 799 days	8.5
TCGA-WX-AA46-01A	0 years, male, white, stage:Stage II, alive, 756 days	8.5
TCGA-CC-A8HS-01A	0 years, male, asian, stage:Stage IIIC, dead, 300 days	8.4
TCGA-DD-A4NK-01A	0 years, female, white, stage:Stage IIIA, dead, 1210 days	8.4
TCGA-DD-A73F-01A	0 years, female, white, stage:Stage I, alive, 1085 days	8.3
TCGA-G3-A7M7-01A	0 years, male, white, stage:Stage I, alive, 361 days	8.3
TCGA-G3-A5SM-01A	0 years, male, white, stage:Stage II, alive, 520 days	8.2
TCGA-G3-A7M5-01A	0 years, male, asian, stage:Stage I, alive, 447 days	8.2
TCGA-G3-A3CI-01A	0 years, male, white, stage:Stage I, alive, 180 days	8.2
TCGA-CC-A7IH-01A	0 years, male, asian, stage:Stage IIIA, alive, 365 days	8.1
TCGA-DD-A1EF-01A	0 years, female, white, stage:Stage I, dead, 394 days	8.1
TCGA-ED-A7XO-01A	0 years, male, asian, stage:Stage IIIA, alive, 427 days	8.1
TCGA-DD-AAEG-01A	0 years, female, asian, stage:Stage I, alive, 719 days	8.0
TCGA-DD-AAE2-01A	0 years, male, asian, stage:Stage I, alive, 638 days	8.0
TCGA-DD-AAW2-01A	0 years, male, asian, stage:Stage I, alive, 1855 days	8.0
TCGA-DD-AADG-01A	0 years, male, asian, stage:Stage IIIA, alive, 1145 days	8.0
TCGA-BC-A69H-01A	0 years, male, white, stage:Stage II, alive, 444 days	8.0
TCGA-G3-AAV5-01A	0 years, male, white, stage:Stage II, alive, 354 days	7.9
TCGA-G3-AAV2-01A	0 years, male, white, stage:Stage I, alive, 372 days	7.9
TCGA-5R-AA1C-01A	0 years, male, white, stage:Stage II, alive, 520 days	7.9
TCGA-DD-A116-01A	0 years, male, asian, stage:Stage IIIA, dead, 1622 days	7.9
TCGA-DD-AAW3-01A	0 years, male, asian, stage:Stage I, alive, 1633 days	7.8
TCGA-BC-A110-01A	0 years, female, black or african american, stage:'--, dead, 2116 days	7.7
TCGA-CC-5259-01A	0 years, female, asian, stage:Stage IIIC, alive, 250 days	7.7
TCGA-DD-AACC-01A	0 years, male, asian, stage:Stage I, dead, 1685 days	7.7
TCGA-DD-AACB-01A	0 years, female, asian, stage:Stage I, alive, 2324 days	7.7
TCGA-RC-A7S9-01A	0 years, female, asian, stage:Stage I, alive, 640 days	7.6
TCGA-DD-A73D-01A	0 years, female, white, stage:Stage II, alive, 693 days	7.5
TCGA-2Y-A9GU-01A	0 years, female, white, stage:Stage I, alive, 1939 days	7.5
TCGA-2Y-A9H4-01A	0 years, male, black or african american, stage:Stage I, alive, 1452 days	7.5
TCGA-DD-A3A7-01A	0 years, male, stage:Stage IIIB, dead, 419 days	7.5
TCGA-G3-AAV1-01A	0 years, male, asian, stage:Stage IIIC, dead, 359 days	7.4
TCGA-XR-A8TF-01A	0 years, male, white, stage:Stage I, dead, 693 days	7.3
TCGA-DD-AACG-01A	0 years, male, asian, stage:Stage II, dead, 469 days	7.3
TCGA-G3-A25Z-01A	0 years, male, asian, stage:Stage I, alive, 655 days	7.1
TCGA-DD-AAC9-01A	0 years, male, asian, stage:Stage I, alive, 347 days	7.1
TCGA-DD-AACI-01A	0 years, male, asian, stage:Stage II, alive, 1618 days	7.1
TCGA-EP-A3JL-01A	0 years, male, white, stage:Stage I, alive, 303 days	7.1
TCGA-DD-AAE7-01A	0 years, male, asian, stage:Stage I, alive, 644 days	7.1
TCGA-RC-A6M4-01A	0 years, female, white, stage:Stage IIIA, alive, 22 days	7.0
TCGA-NI-A4U2-01A	0 years, male, white, stage:Stage IIIA, dead, 1791 days	7.0
TCGA-DD-A3A1-01A	0 years, male, stage:Stage IIIA, dead, 233 days	7.0
TCGA-DD-AADF-01A	0 years, female, asian, stage:Stage I, dead, 115 days	7.0
TCGA-CC-A8HU-01A	0 years, female, asian, stage:Stage IIIA, dead, 344 days	6.9
TCGA-DD-AAVV-01A	0 years, male, asian, stage:Stage II, alive, 2455 days	6.7
TCGA-LG-A9QD-01A	0 years, male, white, stage:Stage IIIA, alive, 366 days	6.6
TCGA-EP-A2KB-01A	0 years, female, white, stage:Stage I, dead, 596 days	6.6
TCGA-CC-A8HV-01A	0 years, female, asian, stage:Stage II, dead, 279 days	6.5
TCGA-G3-A7M8-01A	0 years, male, asian, stage:Stage I, alive, 430 days	6.5
TCGA-DD-A3A9-01A	0 years, female, white, stage:Stage IVB, dead, 931 days	6.5
TCGA-DD-A39X-01A	0 years, female, white, stage:Stage I, dead, 1694 days	6.3
TCGA-G3-AAV0-01A	0 years, male, asian, stage:Stage I, alive, 476 days	6.1
TCGA-DD-AACJ-01A	0 years, male, asian, stage:Stage II, alive, 2102 days	6.1
TCGA-G3-A3CJ-01A	0 years, male, american indian or alaska native, stage:Stage II, alive, 594 days	6.1
TCGA-DD-AAEE-01A	0 years, male, asian, stage:Stage I, alive, 810 days	5.9
TCGA-G3-AAUZ-01A	0 years, male, stage:Stage I, alive, 480 days	5.8
TCGA-WQ-AB4B-01A	0 years, male, white, stage:Stage II, alive, 395 days	5.7
TCGA-ES-A2HT-01A	0 years, male, black or african american, stage:Stage I, dead, 438 days	5.7
TCGA-G3-A25S-01A	0 years, male, white, stage:Stage I, dead, 416 days	5.5
TCGA-DD-A3A2-01A	0 years, female, white, stage:Stage I, dead, 2131 days	5.4
TCGA-DD-AACV-01A	0 years, male, asian, stage:Stage I, alive, 1531 days	5.3
TCGA-FV-A495-01A	0 years, female, white, stage:Stage II, alive, 1 days	5.2
TCGA-DD-AACO-01A	0 years, male, asian, stage:Stage I, alive, 1876 days	5.1
TCGA-ES-A2HS-01A	0 years, male, white, stage:Stage I, dead, 688 days	5.0
TCGA-DD-AAEB-01A	0 years, male, asian, stage:Stage I, alive, 478 days	4.9
TCGA-DD-AADM-01A	0 years, male, asian, stage:Stage II, dead, 12 days	4.7
TCGA-CC-A123-01A	0 years, female, asian, stage:Stage IIIA, alive, 219 days	4.7
TCGA-DD-AACE-01A	0 years, male, asian, stage:Stage I, alive, 2184 days	4.7
TCGA-DD-AACD-01A	0 years, male, asian, stage:Stage I, dead, 381 days	4.6
TCGA-DD-A39V-01A	0 years, male, white, stage:Stage II, dead, 643 days	4.5
TCGA-DD-A118-01A	0 years, female, white, stage:Stage II, alive, 3437 days	4.5
TCGA-2Y-A9H1-01A	0 years, male, white, stage:Stage I, dead, 1229 days	4.5
TCGA-DD-AAE4-01A	0 years, female, asian, stage:Stage I, alive, 608 days	4.5
TCGA-CC-A7IG-01A	0 years, male, asian, stage:Stage II, dead, 299 days	4.3
TCGA-DD-AAVP-01A	0 years, male, asian, stage:Stage I, alive, 2752 days	4.2
TCGA-DD-AADO-01A	0 years, male, asian, stage:Stage I, alive, 453 days	3.6
TCGA-DD-AADN-01A	0 years, male, asian, stage:Stage I, alive, 898 days	3.1
TCGA-DD-AADS-01A	0 years, male, asian, stage:Stage I, alive, 474 days	2.0
TCGA-DD-A73G-01A	0 years, female, white, stage:Stage I, alive, 3478 days	1.8
TCGA-FV-A4ZP-01A	0 years, male, white, stage:Stage IIIA, dead, 2486 days	1.8
TCGA-2Y-A9H3-01A	0 years, male, white, stage:Stage II, alive, 1516 days	1.6
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LIVER HEPATOCELLULAR CARCINOMA (VALIDATION) - Interactive survival scatter plotⁱ The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red. The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off". Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation. Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient. & Survival analysisⁱ Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
Survival analysis data not available.

LIVER HEPATOCELLULAR CARCINOMA - Protein relative expression (CPTAC)

Number of samples

330

Samples

Sample ID	Sample type	nRPX
125	Tumor	1.6
387	Tumor	1.5
445	Tumor	1.3
851	Tumor	1.3
257	Tumor	1.2
135	Tumor	1.2
375	Tumor	1.1
813	Tumor	1.0
685	Tumor	1.0
527	Tumor	1.0
523	Tumor	0.9
395	Tumor	0.9
313	Tumor	0.9
573	Tumor	0.8
557	Tumor	0.8
113	Tumor	0.7
745	Tumor	0.7
1025	Tumor	0.6
1021	Tumor	0.6
385	Tumor	0.6
131	Tumor	0.5
817	Tumor	0.5
755	Tumor	0.5
343	Tumor	0.5
283	Tumor	0.5
271	Tumor	0.5
285	Tumor	0.4
815	Tumor	0.4
297	Tumor	0.4
975	Tumor	0.4
877	Tumor	0.3
1031	Tumor	0.3
727	Tumor	0.3
1043	Tumor	0.3
635	Tumor	0.3
743	Tumor	0.3
697	Tumor	0.3
777	Tumor	0.3
435	Tumor	0.3
128	Normal	0.3
391	Tumor	0.3
331	Tumor	0.3
137	Tumor	0.3
1027	Tumor	0.2
451	Tumor	0.2
452	Normal	0.2
114	Normal	0.2
661	Tumor	0.2
814	Normal	0.2
124	Normal	0.1
463	Tumor	0.1
742	Normal	0.1
567	Tumor	0.1
857	Tumor	0.1
111	Normal	0.1
217	Tumor	0.1
1013	Tumor	0.1
187	Tumor	0.1
376	Normal	0.1
342	Normal	0.1
963	Tumor	0.1
393	Tumor	0.1
227	Tumor	0.1
746	Normal	0.0
744	Normal	0.0
778	Normal	0.0
311	Tumor	0.0
471	Tumor	0.0
863	Tumor	0.0
447	Tumor	0.0
413	Tumor	0.0
553	Tumor	0.0
671	Tumor	0.0
662	Normal	0.0
468	Normal	0.0
126	Normal	0.0
636	Normal	0.0
214	Normal	0.0
723	Tumor	0.0
218	Normal	0.0
738	Normal	0.0
715	Tumor	0.0
392	Normal	0.0
127	Tumor	0.0
663	Tumor	0.0
232	Normal	0.0
147	Tumor	0.0
741	Tumor	0.0
426	Normal	0.0
957	Tumor	-0.1
262	Normal	-0.1
261	Tumor	-0.1
786	Normal	-0.1
568	Normal	-0.1
641	Tumor	-0.1
721	Tumor	-0.1
914	Normal	-0.1
112	Tumor	-0.1
314	Normal	-0.1
864	Normal	-0.1
698	Normal	-0.1
648	Normal	-0.1
148	Normal	-0.1
466	Normal	-0.1
493	Tumor	-0.1
467	Tumor	-0.1
862	Normal	-0.1
714	Normal	-0.1
955	Tumor	-0.1
524	Normal	-0.1
915	Tumor	-0.1
388	Normal	-0.1
357	Tumor	-0.1
728	Normal	-0.1
981	Tumor	-0.1
272	Normal	-0.1
1044	Normal	-0.1
966	Normal	-0.1
386	Normal	-0.1
487	Tumor	-0.1
816	Normal	-0.1
136	Normal	-0.1
554	Normal	-0.1
132	Normal	-0.1
267	Tumor	-0.1
686	Normal	-0.1
756	Normal	-0.1
982	Normal	-0.1
228	Normal	-0.1
258	Normal	-0.1
172	Normal	-0.1
455	Tumor	-0.1
394	Normal	-0.1
878	Normal	-0.1
298	Normal	-0.2
716	Normal	-0.2
1022	Normal	-0.2
672	Normal	-0.2
696	Normal	-0.2
213	Tumor	-0.2
1028	Normal	-0.2
434	Normal	-0.2
368	Normal	-0.2
138	Normal	-0.2
448	Normal	-0.2
436	Normal	-0.2
953	Tumor	-0.2
268	Normal	-0.2
1016	Normal	-0.2
1015	Tumor	-0.2
666	Normal	-0.2
564	Normal	-0.2
866	Normal	-0.2
191	Tumor	-0.2
518	Normal	-0.2
332	Normal	-0.2
188	Normal	-0.2
186	Normal	-0.2
951	Tumor	-0.2
952	Normal	-0.2
528	Normal	-0.2
537	Tumor	-0.2
277	Tumor	-0.2
852	Normal	-0.2
195	Tumor	-0.2
278	Normal	-0.2
284	Normal	-0.2
367	Tumor	-0.2
196	Normal	-0.2
865	Tumor	-0.2
492	Normal	-0.2
162	Normal	-0.2
422	Normal	-0.2
123	Tumor	-0.2
737	Tumor	-0.2
967	Tumor	-0.2
286	Normal	-0.2
628	Normal	-0.2
433	Tumor	-0.2
956	Normal	-0.2
881	Tumor	-0.2
535	Tumor	-0.2
526	Normal	-0.2
222	Normal	-0.2
664	Normal	-0.2
462	Normal	-0.2
984	Normal	-0.2
396	Normal	-0.2
427	Tumor	-0.2
873	Tumor	-0.2
362	Normal	-0.2
1014	Normal	-0.3
1026	Normal	-0.3
574	Normal	-0.3
146	Normal	-0.3
874	Normal	-0.3
456	Normal	-0.3
572	Normal	-0.3
446	Normal	-0.3
868	Normal	-0.3
431	Tumor	-0.3
351	Tumor	-0.3
414	Normal	-0.3
912	Normal	-0.3
352	Normal	-0.3
983	Tumor	-0.3
944	Normal	-0.3
312	Normal	-0.3
883	Tumor	-0.3
823	Tumor	-0.3
142	Normal	-0.3
494	Normal	-0.3
161	Tumor	-0.3
474	Normal	-0.3
464	Normal	-0.3
344	Normal	-0.3
488	Normal	-0.3
642	Normal	-0.3
713	Tumor	-0.3
412	Normal	-0.3
1042	Normal	-0.3
477	Tumor	-0.3
618	Normal	-0.3
924	Normal	-0.3
185	Tumor	-0.3
615	Tumor	-0.3
366	Normal	-0.3
722	Normal	-0.3
224	Normal	-0.3
968	Normal	-0.3
882	Normal	-0.3
616	Normal	-0.3
361	Tumor	-0.3
425	Tumor	-0.3
533	Tumor	-0.3
497	Tumor	-0.3
884	Normal	-0.3
221	Tumor	-0.3
358	Normal	-0.3
516	Normal	-0.3
354	Normal	-0.3
922	Normal	-0.3
818	Normal	-0.4
432	Normal	-0.4
416	Normal	-0.4
384	Normal	-0.4
918	Normal	-0.4
938	Normal	-0.4
978	Normal	-0.4
538	Normal	-0.4
517	Tumor	-0.4
356	Normal	-0.4
444	Normal	-0.4
514	Normal	-0.4
411	Tumor	-0.4
145	Tumor	-0.4
443	Tumor	-0.4
1046	Normal	-0.4
917	Tumor	-0.4
785	Tumor	-0.4
484	Normal	-0.4
473	Tumor	-0.4
365	Tumor	-0.4
223	Tumor	-0.4
858	Normal	-0.4
141	Tumor	-0.4
491	Tumor	-0.4
921	Tumor	-0.4
1032	Normal	-0.4
192	Normal	-0.4
558	Normal	-0.4
534	Normal	-0.4
911	Tumor	-0.4
212	Normal	-0.4
724	Normal	-0.5
498	Normal	-0.5
977	Tumor	-0.5
424	Normal	-0.5
861	Tumor	-0.5
954	Normal	-0.5
824	Normal	-0.5
428	Normal	-0.5
546	Normal	-0.5
976	Normal	-0.5
421	Tumor	-0.5
171	Tumor	-0.5
481	Tumor	-0.5
328	Normal	-0.5
383	Tumor	-0.5
695	Tumor	-0.5
364	Normal	-0.5
926	Normal	-0.6
536	Normal	-0.6
525	Tumor	-0.6
515	Tumor	-0.6
461	Tumor	-0.6
964	Normal	-0.6
665	Tumor	-0.6
472	Normal	-0.6
965	Tumor	-0.6
211	Tumor	-0.6
231	Tumor	-0.6
363	Tumor	-0.6
923	Tumor	-0.6
617	Tumor	-0.6
937	Tumor	-0.6
423	Tumor	-0.6
355	Tumor	-0.7
925	Tumor	-0.7
627	Tumor	-0.7
647	Tumor	-0.7
913	Tumor	-0.7
545	Tumor	-0.7
916	Normal	-0.7
943	Tumor	-0.7
482	Normal	-0.7
958	Normal	-0.7
353	Tumor	-0.7
478	Normal	-0.7
415	Tumor	-0.8
1045	Tumor	-0.8
1041	Tumor	-0.8
341	Tumor	-0.8
563	Tumor	-0.8
513	Tumor	-0.8
327	Tumor	-0.9
465	Tumor	-1.0
867	Tumor	-1.0
483	Tumor	-1.1
571	Tumor	-1.3
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LIVER CANCER - Protein expressionⁱ A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here. Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.

Antibody stainingⁱ Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells. Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.	Antibody HPA026653	Antibody HPA030053	Antibody CAB034294
Staining
High
Medium
Low
Not detected
Intensity
Strong
Moderate
Weak
Negative
Quantity
>75%
75%-25%
<25%
None
Location
Nuclear
Cytoplasmic/membranous
Cytoplasmic/membranous,nuclear
None
Carcinoma, Hepatocellular, NOS
Cholangiocarcinoma
Adenocarcinoma, NOS Cholangiocarcinoma