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The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
H2BC12 is not prognostic in Kidney Chromophobe (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
19.1
Number of samples
64
Samples
Sample
Description
TPM
TCGA-KM-8639-01A
0 years, male, white, stage:Stage I, alive, 953 days
167.6
TCGA-KL-8334-01A
0 years, female, white, stage:Stage III, alive, 2949 days
74.2
TCGA-KM-8442-01A
0 years, male, stage:Stage II, alive, 1437 days
63.5
TCGA-KL-8345-01A
0 years, male, white, stage:Stage III, alive, 1665 days
54.9
TCGA-KL-8325-01A
0 years, female, white, stage:Stage II, dead, 725 days
53.4
TCGA-KL-8337-01A
0 years, male, black or african american, stage:Stage II, alive, 1364 days
38.5
TCGA-KO-8404-01A
0 years, male, white, stage:Stage IV, dead, 325 days
35.6
TCGA-KL-8342-01A
0 years, female, white, stage:Stage II, alive, 2248 days
34.6
TCGA-KL-8339-01A
0 years, male, white, stage:Stage IV, dead, 855 days
33.4
TCGA-KO-8417-01A
0 years, female, white, stage:Stage I, alive, 2815 days
33.1
TCGA-KN-8435-01A
0 years, male, white, stage:Stage II, alive, 3498 days
30.9
TCGA-KN-8421-01A
0 years, female, white, stage:Stage II, alive, 2674 days
30.5
TCGA-KL-8346-01A
0 years, male, white, stage:Stage II, alive, 1897 days
29.8
TCGA-KM-8443-01A
0 years, male, white, stage:Stage II, alive, 1520 days
28.6
TCGA-KO-8411-01A
0 years, male, white, stage:Stage I, alive, 3958 days
28.5
TCGA-KL-8324-01A
0 years, female, white, stage:Stage II, alive, 4676 days
27.3
TCGA-KN-8427-01A
0 years, male, white, stage:Stage IV, alive, 30 days
26.9
TCGA-KL-8335-01A
0 years, male, white, stage:Stage III, alive, 2815 days
26.8
TCGA-KO-8413-01A
0 years, male, white, stage:Stage I, alive, 3038 days
26.5
TCGA-KO-8416-01A
0 years, male, white, stage:Stage III, alive, 2752 days
26.3
TCGA-KO-8405-01A
0 years, male, white, stage:Stage III, alive, 3056 days
22.0
TCGA-KO-8407-01A
0 years, male, white, stage:Stage II, alive, 2820 days
20.3
TCGA-KN-8418-01A
0 years, female, white, stage:Stage II, alive, 3935 days
20.3
TCGA-KO-8406-01A
0 years, female, white, stage:Stage I, alive, 3145 days
18.6
TCGA-KL-8328-01A
0 years, male, white, stage:Stage II, alive, 3127 days
18.2
TCGA-KL-8341-01A
0 years, male, asian, stage:Stage IV, dead, 754 days
17.7
TCGA-KL-8340-01A
0 years, male, white, stage:Stage II, alive, 2024 days
17.1
TCGA-KL-8330-01A
0 years, female, black or african american, stage:Stage II, alive, 3304 days
17.0
TCGA-KO-8410-01A
0 years, female, white, stage:Stage I, alive, 3136 days
15.6
TCGA-KN-8426-01A
0 years, male, white, stage:Stage IV, alive, 108 days
15.1
TCGA-KO-8403-01A
0 years, male, white, stage:Stage I, alive, 3208 days
14.8
TCGA-KM-8441-01A
0 years, female, white, stage:Stage I, alive, 876 days
14.7
TCGA-KL-8332-01A
0 years, male, white, stage:Stage I, alive, 2582 days
14.5
TCGA-KN-8423-01A
0 years, male, white, stage:Stage I, alive, 788 days
14.3
TCGA-KL-8344-01A
0 years, male, white, stage:Stage III, alive, 876 days
12.9
TCGA-KN-8437-01A
0 years, female, white, stage:Stage I, alive, 3068 days
12.3
TCGA-KN-8431-01A
0 years, female, stage:Stage II, alive, 588 days
11.2
TCGA-KL-8331-01A
0 years, female, white, stage:Stage II, alive, 3010 days
11.2
TCGA-KO-8414-01A
0 years, female, white, stage:Stage II, alive, 3212 days
10.8
TCGA-KM-8439-01A
0 years, male, white, stage:Stage I, alive, 708 days
9.7
TCGA-KM-8476-01A
0 years, male, white, stage:Stage I, alive, 3745 days
9.6
TCGA-KM-8438-01A
0 years, female, white, stage:Stage II, alive, 4622 days
8.3
TCGA-KN-8425-01A
0 years, male, white, stage:Stage I, alive, 3179 days
8.1
TCGA-KO-8415-01A
0 years, female, white, stage:Stage I, alive, 2939 days
6.4
TCGA-KN-8429-01A
0 years, female, white, stage:Stage III, alive, 2650 days
4.4
TCGA-KO-8408-01A
0 years, male, white, stage:Stage III, dead, 507 days
3.8
TCGA-KM-8477-01A
0 years, male, white, stage:Stage I, alive, 1553 days
3.5
TCGA-KM-8440-01A
0 years, male, black or african american, stage:Stage III, alive, 1366 days
0.0
TCGA-KN-8433-01A
0 years, female, white, stage:Stage III, alive, 341 days
0.0
TCGA-KL-8326-01A
0 years, male, white, stage:Stage III, alive, 3322 days
0.0
TCGA-KL-8336-01A
0 years, female, white, stage:Stage IV, dead, 920 days
0.0
TCGA-KL-8327-01A
0 years, female, white, stage:Stage I, alive, 4169 days
0.0
TCGA-KL-8338-01A
0 years, male, white, stage:Stage III, alive, 2633 days
0.0
TCGA-KN-8434-01A
0 years, female, white, stage:Stage II, alive, 1797 days
0.0
TCGA-KO-8409-01A
0 years, male, white, stage:Stage II, alive, 3180 days
0.0
TCGA-KN-8428-01A
0 years, male, white, stage:Stage II, dead, 1590 days
0.0
TCGA-KN-8424-01A
0 years, female, white, stage:Stage I, alive, 1983 days
0.0
TCGA-KL-8343-01A
0 years, male, white, stage:Stage III, dead, 2172 days
0.0
TCGA-KL-8333-01A
0 years, male, white, stage:Stage II, alive, 2991 days
0.0
TCGA-KN-8436-01A
0 years, male, white, stage:Stage II, alive, 1288 days
0.0
TCGA-KN-8419-01A
0 years, male, black or african american, stage:Stage II, alive, 714 days
0.0
TCGA-KN-8432-01A
0 years, female, white, stage:Stage II, alive, 76 days
0.0
TCGA-KL-8329-01A
0 years, female, asian, stage:Stage I, alive, 2752 days
0.0
TCGA-KL-8323-01A
0 years, female, white, stage:Stage III, dead, 1158 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
H2BC12 is not prognostic in Kidney Renal Clear Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
75.5
Number of samples
521
Samples
Sample
Description
TPM
TCGA-B0-4696-01A
0 years, male, white, stage:Stage III, dead, 866 days
412.0
TCGA-B4-5835-01A
0 years, female, white, stage:Stage I, alive, 16 days
379.5
TCGA-CZ-4859-01A
0 years, female, white, stage:Stage I, alive, 1787 days
336.0
TCGA-B0-5119-01A
0 years, female, white, stage:Stage I, alive, 1552 days
299.7
TCGA-CJ-5681-01A
0 years, female, white, stage:Stage IV, dead, 552 days
281.8
TCGA-CJ-5675-01A
0 years, male, white, stage:Stage II, alive, 3936 days
269.0
TCGA-CZ-5460-01A
0 years, male, white, stage:Stage IV, alive, 2873 days
257.4
TCGA-B2-4099-01A
0 years, male, white, stage:Stage I, alive, 972 days
255.5
TCGA-CZ-5467-01A
0 years, female, white, stage:Stage III, dead, 73 days
246.6
TCGA-CJ-4634-01A
0 years, female, white, stage:Stage I, alive, 3498 days
246.1
TCGA-B0-4698-01A
0 years, male, white, stage:Stage IV, dead, 42 days
245.6
TCGA-B0-5098-01A
0 years, female, black or african american, stage:Stage I, dead, 1584 days
227.7
TCGA-EU-5907-01A
0 years, male, white, stage:Stage III, alive, 127 days
221.2
TCGA-CJ-4895-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
217.9
TCGA-B8-A54E-01A
0 years, female, black or african american, stage:Stage I, alive, 909 days
210.5
TCGA-CJ-4640-01A
0 years, male, white, stage:Stage III, alive, 3480 days
204.9
TCGA-CJ-5678-01A
0 years, male, black or african american, stage:Stage IV, dead, 574 days
203.5
TCGA-B0-5116-01A
0 years, male, white, stage:Stage III, alive, 1274 days
202.8
TCGA-BP-4985-01A
0 years, male, white, stage:Stage III, dead, 952 days
200.5
TCGA-BP-4340-01A
0 years, female, white, stage:Stage I, dead, 562 days
197.8
TCGA-B8-A54G-01A
0 years, male, black or african american, stage:Stage I, alive, 53 days
197.7
TCGA-DV-5573-01A
0 years, male, white, stage:Stage I, alive, 1130 days
192.6
TCGA-CZ-5452-01A
0 years, male, white, stage:Stage II, alive, 1789 days
187.9
TCGA-A3-3325-01A
0 years, male, white, stage:Stage I, dead, 1170 days
187.8
TCGA-CJ-4903-01A
0 years, male, white, stage:Stage I, alive, 1560 days
187.5
TCGA-B0-5402-01A
0 years, male, white, stage:Stage IV, alive, 1290 days
183.5
TCGA-A3-3329-01A
0 years, male, white, stage:Stage I, alive, 1624 days
182.7
TCGA-A3-3352-01A
0 years, male, white, stage:Stage III, dead, 561 days
181.5
TCGA-B0-4846-01A
0 years, male, white, stage:Stage IV, dead, 1200 days
181.4
TCGA-CJ-5683-01A
0 years, male, white, stage:Stage I, alive, 1889 days
181.2
TCGA-CZ-5456-01A
0 years, male, white, stage:Stage II, alive, 2422 days
180.4
TCGA-CZ-4858-01A
0 years, male, white, stage:Stage II, dead, 2105 days
177.5
TCGA-DV-A4W0-01A
0 years, male, black or african american, stage:Stage I, alive, 2470 days
175.5
TCGA-CJ-6030-01A
0 years, male, white, stage:Stage I, dead, 2299 days
174.2
TCGA-BP-4165-01A
0 years, female, white, stage:Stage I, alive, 3037 days
174.1
TCGA-A3-A8CQ-01A
0 years, female, black or african american, stage:Stage I, alive, 3 days
169.7
TCGA-B8-4151-01A
0 years, female, white, stage:Stage III, alive, 1299 days
167.0
TCGA-BP-4174-01A
0 years, male, white, stage:Stage II, alive, 1879 days
165.1
TCGA-BP-4782-01A
0 years, female, white, stage:Stage I, alive, 354 days
164.5
TCGA-B0-4849-01A
0 years, male, white, stage:Stage III, dead, 69 days
163.2
TCGA-BP-4338-01A
0 years, male, white, stage:Stage I, alive, 2859 days
161.1
TCGA-B4-5834-01A
0 years, male, white, stage:Stage I, alive, 38 days
159.2
TCGA-CZ-5465-01A
0 years, female, stage:Stage III, dead, 2564 days
158.8
TCGA-BP-4766-01A
0 years, female, white, stage:Stage I, alive, 1462 days
156.8
TCGA-CZ-5458-01A
0 years, male, white, stage:Stage III, alive, 2789 days
155.1
TCGA-AK-3428-01A
0 years, male, white, stage:Stage III, alive, 3728 days
154.1
TCGA-BP-4987-01A
0 years, female, asian, stage:Stage I, alive, 1124 days
153.7
TCGA-CJ-4887-01A
0 years, male, white, stage:Stage IV, dead, 932 days
153.0
TCGA-BP-5192-01A
0 years, male, white, stage:Stage I, alive, 714 days
152.5
TCGA-B8-4154-01A
0 years, female, white, stage:Stage I, alive, 1380 days
151.3
TCGA-T7-A92I-01A
0 years, female, black or african american, stage:Stage I, alive, 356 days
150.6
TCGA-G6-A8L8-01A
0 years, female, black or african american, stage:Stage I, dead, 1091 days
150.3
TCGA-B0-5690-01A
0 years, female, white, stage:Stage I, alive, 3392 days
149.7
TCGA-A3-3313-01A
0 years, male, black or african american, stage:Stage I, dead, 735 days
149.6
TCGA-BP-4161-01A
0 years, male, white, stage:Stage I, alive, 2746 days
147.2
TCGA-B0-4828-01A
0 years, male, white, stage:Stage IV, dead, 307 days
147.1
TCGA-B2-5639-01A
0 years, male, white, stage:Stage IV, dead, 1003 days
146.8
TCGA-BP-5184-01A
0 years, male, white, stage:Stage I, alive, 1133 days
146.6
TCGA-CZ-5454-01A
0 years, male, white, stage:Stage IV, dead, 722 days
146.4
TCGA-B0-4837-01A
0 years, male, white, stage:Stage I, dead, 1378 days
145.2
TCGA-CJ-4871-01A
0 years, male, white, stage:Stage IV, alive, 2423 days
144.5
TCGA-CZ-5455-01A
0 years, male, white, stage:Stage IV, dead, 561 days
143.9
TCGA-CW-5584-01A
0 years, male, white, stage:Stage III, dead, 164 days
142.8
TCGA-B0-4814-01A
0 years, male, white, stage:Stage IV, dead, 168 days
142.1
TCGA-CZ-5982-01A
0 years, female, white, stage:Stage I, alive, 2439 days
141.6
TCGA-B0-4688-01A
0 years, male, white, stage:Stage IV, dead, 101 days
141.6
TCGA-B0-5399-01A
0 years, male, white, stage:Stage I, alive, 1411 days
140.9
TCGA-B0-5102-01A
0 years, female, white, stage:Stage I, dead, 2764 days
140.8
TCGA-B2-5633-01A
0 years, male, white, stage:Stage I, alive, 963 days
140.7
TCGA-B0-4690-01A
0 years, male, white, stage:Stage IV, dead, 43 days
140.2
TCGA-CJ-4894-01A
0 years, male, white, stage:Stage III, dead, 841 days
140.0
TCGA-B0-4824-01A
0 years, female, white, stage:Stage I, dead, 1657 days
139.5
TCGA-B0-4810-01A
0 years, male, white, stage:Stage III, dead, 478 days
138.7
TCGA-CJ-4901-01A
0 years, male, white, stage:Stage III, alive, 1450 days
136.9
TCGA-BP-5180-01A
0 years, male, white, stage:Stage I, alive, 2263 days
136.2
TCGA-BP-4959-01A
0 years, male, white, stage:Stage I, alive, 2660 days
136.1
TCGA-CJ-4876-01A
0 years, male, white, stage:Stage II, alive, 1955 days
135.5
TCGA-BP-5006-01A
0 years, male, white, stage:Stage I, alive, 840 days
135.1
TCGA-A3-3358-01A
0 years, female, white, stage:Stage I, alive, 1307 days
134.0
TCGA-B0-4706-01A
0 years, male, white, stage:Stage III, dead, 65 days
133.8
TCGA-A3-3317-01A
0 years, male, stage:Stage II, alive, 1491 days
133.2
TCGA-BP-5177-01A
0 years, female, white, stage:Stage I, alive, 293 days
131.4
TCGA-B0-4712-01A
0 years, male, white, stage:Stage IV, dead, 1337 days
131.0
TCGA-BP-5178-01A
0 years, male, white, stage:Stage IV, dead, 1912 days
130.2
TCGA-A3-3320-01A
0 years, female, white, stage:Stage I, alive, 1508 days
130.1
TCGA-CJ-4637-01A
0 years, female, white, stage:Stage IV, dead, 2227 days
129.5
TCGA-A3-3383-01A
0 years, male, white, stage:Stage I, alive, 861 days
129.0
TCGA-A3-3306-01A
0 years, male, white, stage:Stage I, alive, 1120 days
128.7
TCGA-CZ-5469-01A
0 years, male, white, stage:Stage II, dead, 946 days
127.4
TCGA-GK-A6C7-01A
0 years, female, black or african american, stage:Stage I, alive, 61 days
127.2
TCGA-B2-5635-01A
0 years, male, white, stage:Stage I, alive, 755 days
126.4
TCGA-B8-5158-01A
0 years, male, white, stage:Stage III, alive, 1218 days
125.1
TCGA-A3-3346-01A
0 years, male, white, stage:Stage I, dead, 137 days
125.1
TCGA-B0-4848-01A
0 years, male, white, stage:Stage III, dead, 883 days
125.1
TCGA-B0-5696-01A
0 years, male, white, stage:Stage III, alive, 2609 days
125.0
TCGA-CJ-5679-01A
0 years, male, white, stage:Stage III, dead, 679 days
124.5
TCGA-BP-4975-01A
0 years, male, white, stage:Stage I, alive, 1433 days
124.3
TCGA-CW-5581-01A
0 years, male, white, stage:Stage I, alive, 2799 days
124.0
TCGA-BP-5181-01A
0 years, female, white, stage:Stage I, alive, 1495 days
123.3
TCGA-A3-3343-01A
0 years, male, white, stage:Stage II, alive, 945 days
122.7
TCGA-CJ-4893-01A
0 years, female, white, stage:Stage I, alive, 750 days
119.6
TCGA-B0-5699-01A
0 years, male, white, stage:Stage I, alive, 3841 days
118.4
TCGA-CW-6088-01A
0 years, male, white, stage:Stage I, alive, 3222 days
118.1
TCGA-BP-5194-01A
0 years, male, white, stage:Stage I, alive, 408 days
117.9
TCGA-B0-4844-01A
0 years, male, white, stage:Stage IV, dead, 313 days
117.3
TCGA-BP-4162-01A
0 years, female, white, stage:Stage I, alive, 3074 days
116.0
TCGA-B8-4620-01A
0 years, female, white, stage:Stage III, alive, 777 days
115.4
TCGA-B8-5549-01A
0 years, male, white, stage:Stage I, alive, 194 days
113.9
TCGA-A3-3373-01A
0 years, female, white, stage:Stage I, alive, 1621 days
113.1
TCGA-CZ-5461-01A
0 years, male, white, stage:Stage IV, dead, 330 days
112.7
TCGA-B8-A54K-01A
0 years, male, black or african american, stage:Stage I, alive, 469 days
111.5
TCGA-BP-4963-01A
0 years, male, white, stage:Stage I, alive, 1834 days
111.4
TCGA-BP-4781-01A
0 years, male, white, stage:Stage I, alive, 2080 days
111.3
TCGA-CJ-4882-01A
0 years, male, black or african american, stage:Stage III, alive, 1883 days
111.2
TCGA-CZ-5453-01A
0 years, male, white, stage:Stage II, dead, 2419 days
111.0
TCGA-B0-4845-01A
0 years, male, white, stage:Stage IV, dead, 1986 days
111.0
TCGA-CJ-4872-01A
0 years, male, white, stage:Stage I, alive, 1435 days
110.9
TCGA-BP-4346-01A
0 years, male, white, stage:Stage III, dead, 1493 days
110.9
TCGA-BP-4768-01A
0 years, female, white, stage:Stage I, alive, 400 days
110.7
TCGA-A3-3311-01A
0 years, male, stage:Stage I, dead, 1191 days
110.4
TCGA-AK-3455-01A
0 years, female, white, stage:Stage III, dead, 683 days
109.6
TCGA-B0-5698-01A
0 years, male, black or african american, stage:Stage I, alive, 3631 days
108.1
TCGA-BP-5183-01A
0 years, male, white, stage:Stage III, alive, 1291 days
107.1
TCGA-A3-A8OV-01A
0 years, male, black or african american, stage:Stage I, alive, 340 days
106.9
TCGA-G6-A8L6-01A
0 years, male, black or african american, stage:Stage IV, dead, 313 days
106.6
TCGA-B0-4694-01A
0 years, male, white, stage:Stage III, dead, 106 days
106.0
TCGA-B0-5712-01A
0 years, female, black or african american, stage:Stage IV, alive, 2722 days
105.6
TCGA-CJ-6032-01A
0 years, female, white, stage:Stage II, alive, 3639 days
105.2
TCGA-CZ-4853-01A
0 years, male, white, stage:Stage I, alive, 774 days
103.2
TCGA-A3-3367-01A
0 years, male, white, stage:Stage I, alive, 2270 days
102.9
TCGA-AS-3778-01A
0 years, male, white, stage:Stage I, alive, 43 days
102.8
TCGA-CJ-4885-01A
0 years, male, white, stage:Stage IV, alive, 3451 days
102.1
TCGA-BP-4784-01A
0 years, female, white, stage:Stage I, alive, 1854 days
100.7
TCGA-B0-4816-01A
0 years, male, white, stage:Stage II, dead, 1371 days
100.2
TCGA-B8-5551-01A
0 years, female, black or african american, stage:Stage I, alive, 16 days
99.0
TCGA-A3-3307-01A
0 years, male, stage:Stage III, alive, 1436 days
98.7
TCGA-CW-5590-01A
0 years, male, white, stage:Stage IV, dead, 1075 days
98.1
TCGA-B4-5836-01A
0 years, female, white, stage:Stage I, alive, 141 days
98.0
TCGA-CZ-4865-01A
0 years, female, white, stage:Stage I, dead, 166 days
97.9
TCGA-A3-3326-01A
0 years, male, white, stage:Stage I, alive, 1137 days
97.4
TCGA-BP-5186-01A
0 years, female, white, stage:Stage I, alive, 693 days
96.5
TCGA-B0-5812-01A
0 years, male, white, stage:Stage I, alive, 3834 days
96.0
TCGA-CJ-6028-01A
0 years, male, white, stage:Stage IV, dead, 1625 days
96.0
TCGA-CJ-6027-01A
0 years, male, white, stage:Stage I, dead, 3615 days
95.9
TCGA-DV-5566-01A
0 years, female, white, stage:Stage I, alive, 1398 days
95.8
TCGA-BP-5195-01A
0 years, male, white, stage:Stage I, alive, 749 days
95.2
TCGA-BP-4177-01A
0 years, male, white, stage:Stage I, alive, 1670 days
94.8
TCGA-B0-5077-01A
0 years, male, white, stage:Stage I, dead, 1317 days
94.6
TCGA-A3-3365-01A
0 years, male, white, stage:Stage I, alive, 873 days
94.5
TCGA-BP-4326-01A
0 years, female, white, stage:Stage I, dead, 1625 days
94.1
TCGA-B2-5641-01A
0 years, male, white, stage:Stage I, alive, 656 days
93.9
TCGA-A3-A8OW-01A
0 years, male, black or african american, stage:Stage III, alive, 323 days
93.2
TCGA-BP-4330-01A
0 years, female, black or african american, stage:Stage III, alive, 1888 days
93.1
TCGA-CJ-5671-01A
0 years, male, white, stage:Stage I, alive, 3987 days
92.9
TCGA-AK-3431-01A
0 years, female, white, stage:Stage II, dead, 2241 days
92.5
TCGA-CZ-4861-01A
0 years, male, white, stage:Stage II, dead, 446 days
92.4
TCGA-BP-4798-01A
0 years, male, white, stage:'--, dead, 334 days
92.4
TCGA-AK-3453-01A
0 years, female, white, stage:Stage II, alive, 2531 days
92.2
TCGA-CJ-6033-01A
0 years, female, white, stage:Stage IV, dead, 224 days
90.3
TCGA-BP-4770-01A
0 years, female, white, stage:Stage IV, dead, 329 days
89.6
TCGA-EU-5905-01A
0 years, female, white, stage:Stage I, alive, 119 days
89.5
TCGA-BP-4777-01A
0 years, male, white, stage:Stage I, alive, 1731 days
88.9
TCGA-BP-4774-01A
0 years, female, white, stage:Stage I, alive, 1885 days
88.5
TCGA-CJ-4907-01A
0 years, male, white, stage:Stage III, alive, 1499 days
88.0
TCGA-CW-6087-01A
0 years, male, white, stage:Stage IV, dead, 41 days
87.9
TCGA-A3-3382-01A
0 years, male, white, stage:Stage I, alive, 574 days
87.4
TCGA-CJ-4899-01A
0 years, male, asian, stage:Stage I, alive, 1528 days
86.1
TCGA-B8-5164-01A
0 years, male, white, stage:Stage III, alive, 26 days
85.9
TCGA-B0-5693-01A
0 years, female, white, stage:Stage I, alive, 4074 days
85.4
TCGA-DV-5575-01A
0 years, female, white, stage:Stage I, alive, 1729 days
85.1
TCGA-BP-5202-01A
0 years, male, white, stage:Stage III, alive, 29 days
85.1
TCGA-BP-4332-01A
0 years, male, white, stage:Stage III, alive, 1133 days
84.2
TCGA-CZ-5457-01A
0 years, male, white, stage:Stage III, alive, 2754 days
84.2
TCGA-BP-4344-01A
0 years, female, white, stage:Stage I, alive, 1666 days
84.1
TCGA-BP-4329-01A
0 years, male, white, stage:Stage III, dead, 845 days
83.9
TCGA-BP-5187-01A
0 years, male, white, stage:Stage I, alive, 406 days
83.9
TCGA-BP-5176-01A
0 years, female, white, stage:Stage I, dead, 1590 days
83.9
TCGA-AK-3425-01A
0 years, male, white, stage:Stage I, alive, 3343 days
83.4
TCGA-BP-4355-01A
0 years, female, white, stage:Stage III, dead, 953 days
83.4
TCGA-CJ-4884-01A
0 years, female, white, stage:Stage III, alive, 1759 days
83.3
TCGA-AK-3445-01A
0 years, male, white, stage:Stage III, alive, 2392 days
82.8
TCGA-BP-4351-01A
0 years, female, white, stage:Stage III, alive, 970 days
82.1
TCGA-DV-5567-01A
0 years, female, black or african american, stage:Stage I, alive, 2004 days
81.9
TCGA-CZ-5470-01A
0 years, female, stage:Stage II, alive, 386 days
81.9
TCGA-A3-A6NN-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
81.6
TCGA-BP-4771-01A
0 years, male, white, stage:Stage IV, dead, 162 days
81.6
TCGA-B2-3924-01A
0 years, male, white, stage:Stage I, alive, 1092 days
81.5
TCGA-A3-3316-01A
0 years, male, white, stage:Stage II, alive, 1493 days
81.3
TCGA-A3-3323-01A
0 years, male, white, stage:Stage I, alive, 1106 days
80.7
TCGA-B0-5692-01A
0 years, female, white, stage:Stage III, alive, 3944 days
80.7
TCGA-AK-3434-01A
0 years, male, white, stage:Stage I, alive, 2087 days
80.5
TCGA-BP-4756-01A
0 years, female, asian, stage:Stage I, alive, 374 days
80.3
TCGA-A3-3380-01A
0 years, male, stage:Stage I, alive, 567 days
80.0
TCGA-DV-5576-01A
0 years, female, black or african american, stage:Stage I, dead, 727 days
79.8
TCGA-CZ-5462-01A
0 years, male, white, stage:Stage IV, dead, 311 days
79.4
TCGA-B4-5378-01A
0 years, male, white, stage:Stage I, alive, 175 days
78.9
TCGA-CJ-4905-01A
0 years, female, white, stage:Stage I, alive, 1496 days
77.8
TCGA-B0-4707-01A
0 years, male, white, stage:Stage III, dead, 600 days
77.7
TCGA-CW-6093-01A
0 years, male, white, stage:Stage I, alive, 3146 days
77.7
TCGA-BP-4759-01A
0 years, male, white, stage:Stage I, alive, 2372 days
77.5
TCGA-BP-4804-01A
0 years, male, white, stage:Stage I, alive, 1459 days
76.9
TCGA-CJ-4902-01A
0 years, male, white, stage:Stage III, alive, 1520 days
76.8
TCGA-EU-5904-01A
0 years, female, white, stage:Stage I, alive, 551 days
76.8
TCGA-CZ-4862-01A
0 years, male, white, stage:Stage I, alive, 3271 days
76.6
TCGA-B0-5710-01A
0 years, male, white, stage:Stage I, alive, 2430 days
76.6
TCGA-CZ-5451-01A
0 years, male, white, stage:Stage II, alive, 1929 days
76.2
TCGA-CZ-5468-01A
0 years, male, white, stage:Stage IV, dead, 59 days
75.9
TCGA-B8-A54J-01A
0 years, male, black or african american, stage:Stage II, alive, 528 days
75.1
TCGA-CJ-5676-01A
0 years, male, white, stage:Stage III, alive, 4067 days
74.8
TCGA-CW-6090-01A
0 years, male, white, stage:Stage I, alive, 2552 days
74.4
TCGA-BP-4166-01A
0 years, male, white, stage:Stage III, alive, 13 days
74.2
TCGA-CZ-5987-01A
0 years, male, white, stage:Stage IV, dead, 445 days
74.1
TCGA-CZ-5984-01A
0 years, male, white, stage:Stage I, alive, 2067 days
74.0
TCGA-B0-5096-01A
0 years, female, white, stage:Stage III, dead, 68 days
72.0
TCGA-CZ-5466-01A
0 years, male, stage:Stage III, alive, 685 days
72.0
TCGA-B0-4827-01A
0 years, female, white, stage:Stage III, dead, 885 days
72.0
TCGA-A3-3372-01A
0 years, male, white, stage:Stage III, alive, 735 days
71.4
TCGA-B0-5110-01A
0 years, female, white, stage:Stage I, alive, 2009 days
71.3
TCGA-6D-AA2E-01A
0 years, female, black or african american, stage:Stage I, alive, 362 days
71.0
TCGA-B2-5636-01A
0 years, male, white, stage:Stage I, alive, 919 days
70.1
TCGA-DV-A4VX-01A
0 years, male, black or african american, stage:Stage IV, dead, 1626 days
70.0
TCGA-B0-4847-01A
0 years, male, white, stage:Stage IV, dead, 793 days
69.6
TCGA-BP-4158-01A
0 years, male, white, stage:Stage I, alive, 3377 days
69.6
TCGA-DV-5568-01A
0 years, male, white, stage:Stage I, alive, 370 days
68.8
TCGA-A3-3335-01A
0 years, male, white, stage:Stage II, alive, 1886 days
68.6
TCGA-B2-4101-01A
0 years, male, white, stage:Stage II, alive, 648 days
68.1
TCGA-B0-5701-01A
0 years, male, white, stage:Stage III, alive, 2461 days
68.0
TCGA-CJ-4889-01A
0 years, female, white, stage:Stage I, alive, 1946 days
68.0
TCGA-B8-A54H-01A
0 years, female, black or african american, stage:Stage II, alive, 256 days
67.4
TCGA-B0-5088-01A
0 years, male, white, stage:Stage I, dead, 563 days
66.6
TCGA-BP-5170-01A
0 years, male, white, stage:Stage I, alive, 2412 days
66.5
TCGA-CZ-5986-01A
0 years, male, white, stage:Stage I, alive, 373 days
66.3
TCGA-CW-5587-01A
0 years, female, white, stage:Stage III, alive, 2226 days
65.2
TCGA-BP-4969-01A
0 years, female, white, stage:Stage I, alive, 1794 days
65.1
TCGA-BP-4991-01A
0 years, male, white, stage:Stage I, alive, 1413 days
65.0
TCGA-A3-3359-01A
0 years, female, white, stage:Stage I, alive, 2504 days
64.6
TCGA-B0-4700-01A
0 years, male, white, stage:Stage IV, dead, 1980 days
64.4
TCGA-BP-4176-01A
0 years, male, white, stage:Stage I, alive, 1955 days
64.2
TCGA-CJ-5684-01A
0 years, male, white, stage:Stage III, alive, 2231 days
64.1
TCGA-BP-4159-01A
0 years, male, white, stage:Stage I, dead, 2601 days
64.0
TCGA-CJ-4920-01A
0 years, female, white, stage:Stage I, dead, 139 days
63.7
TCGA-A3-3387-01A
0 years, male, white, stage:Stage I, alive, 617 days
63.5
TCGA-BP-4169-01A
0 years, female, white, stage:Stage II, dead, 701 days
63.5
TCGA-CJ-4644-01A
0 years, female, white, stage:Stage IV, dead, 336 days
63.5
TCGA-CZ-5464-01A
0 years, male, white, stage:Stage IV, alive, 2128 days
63.5
TCGA-CJ-4869-01A
0 years, male, white, stage:Stage III, alive, 2554 days
63.5
TCGA-BP-5000-01A
0 years, male, white, stage:Stage I, alive, 563 days
63.5
TCGA-BP-4965-01A
0 years, male, white, stage:Stage I, alive, 1871 days
62.9
TCGA-BP-5196-01A
0 years, male, white, stage:Stage I, alive, 1018 days
62.8
TCGA-CJ-5677-01A
0 years, female, white, stage:Stage IV, dead, 782 days
62.7
TCGA-B0-4714-01A
0 years, male, white, stage:Stage IV, dead, 99 days
62.6
TCGA-BP-4762-01A
0 years, male, white, stage:Stage I, dead, 1343 days
62.6
TCGA-CW-5588-01A
0 years, female, white, stage:Stage I, alive, 2017 days
62.5
TCGA-B8-5545-01A
0 years, male, black or african american, stage:Stage I, alive, 1525 days
62.1
TCGA-CJ-5672-01A
0 years, male, white, stage:Stage I, dead, 1972 days
62.0
TCGA-BP-4986-01A
0 years, male, white, stage:Stage I, alive, 785 days
62.0
TCGA-B0-5109-01A
0 years, male, white, stage:Stage III, dead, 587 days
61.7
TCGA-CZ-5988-01A
0 years, male, white, stage:Stage I, alive, 693 days
61.5
TCGA-BP-4982-01A
0 years, male, white, stage:Stage I, alive, 1014 days
61.5
TCGA-AK-3460-01A
0 years, male, white, stage:Stage I, alive, 2508 days
61.4
TCGA-BP-5007-01A
0 years, male, white, stage:Stage II, alive, 1140 days
61.2
TCGA-BP-5200-01A
0 years, male, white, stage:Stage II, alive, 1063 days
61.0
TCGA-B8-5546-01A
0 years, female, black or african american, stage:Stage I, alive, 505 days
60.9
TCGA-BP-4961-01A
0 years, male, white, stage:Stage I, alive, 1935 days
60.4
TCGA-A3-3347-01A
0 years, female, white, stage:Stage III, dead, 1610 days
60.1
TCGA-EU-5906-01A
0 years, male, white, stage:Stage I, alive, 206 days
60.0
TCGA-BP-4977-01A
0 years, male, white, stage:Stage I, alive, 454 days
60.0
TCGA-BP-4795-01A
0 years, female, white, stage:Stage I, alive, 620 days
59.9
TCGA-B0-5092-01A
0 years, female, white, stage:Stage IV, dead, 459 days
59.8
TCGA-BP-4775-01A
0 years, female, white, stage:Stage I, alive, 1843 days
59.7
TCGA-BP-4763-01A
0 years, female, white, stage:Stage I, dead, 1270 days
59.4
TCGA-B0-5703-01A
0 years, male, white, stage:Stage I, alive, 2246 days
59.3
TCGA-B8-5162-01A
0 years, male, white, stage:Stage II, alive, 36 days
59.2
TCGA-BP-4995-01A
0 years, male, white, stage:Stage I, alive, 1371 days
59.0
TCGA-AK-3461-01A
0 years, male, white, stage:Stage I, alive, 2217 days
58.9
TCGA-CJ-4886-01A
0 years, female, white, stage:Stage I, alive, 1952 days
58.8
TCGA-A3-3322-01A
0 years, male, white, stage:Stage I, alive, 1478 days
58.7
TCGA-BP-4789-01A
0 years, male, white, stage:Stage I, alive, 1489 days
58.4
TCGA-B0-5120-01A
0 years, female, white, stage:Stage I, alive, 1169 days
58.4
TCGA-BP-4761-01A
0 years, male, white, stage:Stage III, alive, 182 days
58.1
TCGA-BP-4353-01A
0 years, male, white, stage:Stage I, dead, 375 days
58.1
TCGA-B0-4945-01A
0 years, female, white, stage:Stage I, dead, 2145 days
57.8
TCGA-A3-3376-01A
0 years, male, black or african american, stage:Stage I, dead, 1696 days
57.6
TCGA-B0-4838-01A
0 years, female, white, stage:Stage I, dead, 834 days
57.6
TCGA-CJ-4635-01A
0 years, male, white, stage:Stage I, alive, 1416 days
57.6
TCGA-B8-A54F-01A
0 years, female, black or african american, stage:Stage I, alive, 519 days
57.2
TCGA-BP-4973-01A
0 years, male, white, stage:Stage III, alive, 1384 days
56.7
TCGA-BP-5199-01A
0 years, male, white, stage:Stage II, alive, 1355 days
56.7
TCGA-B8-4143-01A
0 years, female, white, stage:Stage IV, dead, 709 days
56.5
TCGA-BP-5198-01A
0 years, male, white, stage:Stage III, alive, 603 days
56.2
TCGA-BP-4173-01A
0 years, male, white, stage:Stage II, alive, 1893 days
56.0
TCGA-B0-4701-01A
0 years, female, white, stage:Stage IV, dead, 238 days
56.0
TCGA-DV-5569-01A
0 years, female, white, stage:Stage I, alive, 355 days
55.6
TCGA-B0-5084-01A
0 years, male, white, stage:Stage IV, dead, 222 days
55.5
TCGA-BP-4964-01A
0 years, female, white, stage:Stage I, alive, 1862 days
55.4
TCGA-BP-4760-01A
0 years, male, black or african american, stage:Stage I, alive, 2361 days
54.8
TCGA-MM-A564-01A
0 years, male, black or african american, stage:Stage II, alive, 607 days
54.8
TCGA-B4-5838-01A
0 years, male, white, stage:'--, alive, 166 days
54.6
TCGA-BP-5191-01A
0 years, male, white, stage:Stage III, alive, 967 days
54.6
TCGA-B0-4710-01A
0 years, female, white, stage:Stage III, alive, 1755 days
54.4
TCGA-CZ-4863-01A
0 years, female, white, stage:Stage III, alive, 1928 days
54.2
TCGA-BP-4341-01A
0 years, male, white, stage:Stage III, dead, 1589 days
54.1
TCGA-B0-5694-01A
0 years, male, white, stage:Stage III, dead, 480 days
54.0
TCGA-CZ-4864-01A
0 years, male, white, stage:Stage II, dead, 1315 days
54.0
TCGA-AK-3456-01A
0 years, male, black or african american, stage:Stage II, alive, 1143 days
53.9
TCGA-B4-5844-01A
0 years, female, white, stage:Stage II, alive, 7 days
53.6
TCGA-A3-3328-01A
0 years, male, white, stage:Stage I, alive, 1385 days
53.3
TCGA-CJ-4916-01A
0 years, female, white, stage:Stage III, alive, 1373 days
53.2
TCGA-BP-4345-01A
0 years, male, white, stage:Stage III, alive, 1516 days
53.1
TCGA-BP-4999-01A
0 years, male, white, stage:Stage I, alive, 1266 days
52.9
TCGA-CW-5583-01A
0 years, female, white, stage:Stage I, alive, 2489 days
52.6
TCGA-B0-5095-01A
0 years, male, white, stage:Stage III, dead, 245 days
52.4
TCGA-B0-5400-01A
0 years, female, white, stage:Stage III, alive, 1733 days
52.3
TCGA-BP-4994-01A
0 years, male, white, stage:Stage I, alive, 1308 days
51.9
TCGA-AK-3465-01A
0 years, female, black or african american, stage:Stage I, alive, 369 days
51.8
TCGA-B4-5843-01A
0 years, male, white, stage:Stage I, alive, 11 days
51.2
TCGA-CJ-4912-01A
0 years, male, white, stage:Stage II, alive, 1657 days
51.1
TCGA-B0-4839-01A
0 years, female, white, stage:Stage I, dead, 1639 days
51.1
TCGA-BP-5169-01A
0 years, male, white, stage:Stage I, alive, 193 days
50.8
TCGA-B0-4693-01A
0 years, female, white, stage:Stage III, dead, 77 days
50.7
TCGA-B0-5094-01A
0 years, male, white, stage:Stage IV, dead, 333 days
50.6
TCGA-B0-4833-01A
0 years, female, white, stage:Stage I, dead, 2386 days
50.5
TCGA-CW-5589-01A
0 years, male, white, stage:Stage I, alive, 2378 days
50.4
TCGA-DV-5565-01A
0 years, male, white, stage:Stage I, alive, 1329 days
50.2
TCGA-BP-5189-01A
0 years, male, white, stage:Stage I, dead, 822 days
50.1
TCGA-BP-4799-01A
0 years, male, white, stage:Stage III, dead, 1133 days
50.0
TCGA-BP-4354-01A
0 years, male, white, stage:Stage IV, dead, 1034 days
50.0
TCGA-A3-3319-01A
0 years, male, white, stage:Stage I, alive, 1130 days
49.8
TCGA-BP-4331-01A
0 years, male, white, stage:Stage I, dead, 2454 days
49.2
TCGA-BP-4803-01A
0 years, male, white, stage:Stage III, alive, 204 days
49.0
TCGA-B2-A4SR-01A
0 years, male, black or african american, stage:Stage II, alive, 507 days
48.4
TCGA-B8-5550-01A
0 years, male, white, stage:Stage III, alive, 1476 days
48.3
TCGA-DV-5574-01A
0 years, male, white, stage:Stage I, alive, 2016 days
47.7
TCGA-B8-5165-01A
0 years, male, white, stage:Stage I, alive, 737 days
47.4
TCGA-A3-3308-01A
0 years, female, white, stage:Stage III, alive, 16 days
47.4
TCGA-CJ-4874-01A
0 years, female, white, stage:Stage I, alive, 2283 days
47.4
TCGA-BP-4801-01A
0 years, male, white, stage:Stage I, alive, 1124 days
47.2
TCGA-B0-4703-01A
0 years, male, white, stage:Stage IV, dead, 182 days
47.0
TCGA-BP-4160-01A
0 years, male, white, stage:Stage III, alive, 2881 days
46.8
TCGA-BP-4967-01A
0 years, male, white, stage:Stage III, alive, 205 days
46.3
TCGA-BP-4998-01A
0 years, male, asian, stage:Stage I, alive, 932 days
46.1
TCGA-AS-3777-01A
0 years, male, white, stage:Stage I, alive, 1238 days
45.7
TCGA-AK-3436-01A
0 years, male, white, stage:Stage IV, alive, 3331 days
45.1
TCGA-B0-5097-01A
0 years, female, white, stage:Stage III, alive, 665 days
45.0
TCGA-BP-4787-01A
0 years, female, white, stage:Stage IV, dead, 480 days
44.7
TCGA-AK-3458-01A
0 years, male, white, stage:Stage I, alive, 1168 days
44.5
TCGA-BP-4342-01A
0 years, male, white, stage:Stage II, dead, 2256 days
44.3
TCGA-A3-3331-01A
0 years, female, white, stage:Stage I, alive, 1257 days
44.2
TCGA-B0-4815-01A
0 years, male, white, stage:Stage III, dead, 1588 days
43.8
TCGA-BP-5174-01A
0 years, female, white, stage:Stage I, alive, 2257 days
43.6
TCGA-MM-A563-01A
0 years, male, black or african american, stage:'--, alive, 591 days
43.4
TCGA-B0-4697-01A
0 years, female, white, stage:Stage IV, dead, 578 days
43.0
TCGA-CJ-4900-01A
0 years, female, white, stage:Stage IV, dead, 1714 days
42.9
TCGA-BP-4337-01A
0 years, female, white, stage:Stage III, dead, 2 days
42.5
TCGA-B8-5163-01A
0 years, female, white, stage:Stage III, alive, 822 days
42.3
TCGA-CJ-5682-01A
0 years, male, white, stage:Stage IV, alive, 3736 days
42.1
TCGA-BP-4797-01A
0 years, male, white, stage:Stage III, alive, 1107 days
41.9
TCGA-DV-A4VZ-01A
0 years, male, black or african american, stage:Stage I, alive, 365 days
41.8
TCGA-A3-3324-01A
0 years, male, white, stage:Stage I, alive, 1186 days
41.7
TCGA-BP-4972-01A
0 years, female, white, stage:Stage III, alive, 1502 days
41.5
TCGA-A3-3370-01A
0 years, female, white, stage:Stage I, alive, 2274 days
41.5
TCGA-CJ-4908-01A
0 years, male, white, stage:Stage I, alive, 1531 days
41.5
TCGA-B0-4699-01A
0 years, male, white, stage:Stage IV, dead, 110 days
41.0
TCGA-CZ-4857-01A
0 years, male, white, stage:Stage IV, dead, 1432 days
41.0
TCGA-CJ-4639-01A
0 years, female, white, stage:Stage II, alive, 3229 days
40.3
TCGA-BP-4960-01A
0 years, male, white, stage:Stage II, alive, 2172 days
40.1
TCGA-AK-3454-01A
0 years, male, white, stage:Stage I, alive, 874 days
40.1
TCGA-CJ-4890-01A
0 years, male, white, stage:Stage IV, alive, 3519 days
39.9
TCGA-B0-5711-01A
0 years, male, white, stage:Stage III, alive, 3989 days
39.9
TCGA-BP-4769-01A
0 years, male, white, stage:Stage I, alive, 1876 days
39.7
TCGA-A3-3363-01A
0 years, male, asian, stage:Stage II, alive, 319 days
39.5
TCGA-BP-4989-01A
0 years, male, white, stage:Stage III, alive, 118 days
39.1
TCGA-CJ-4875-01A
0 years, male, white, stage:Stage IV, dead, 3554 days
39.1
TCGA-A3-3351-01A
0 years, male, white, stage:Stage II, alive, 910 days
38.6
TCGA-B0-5099-01A
0 years, female, white, stage:Stage III, dead, 485 days
38.3
TCGA-CZ-5463-01A
0 years, male, white, stage:Stage II, alive, 662 days
37.7
TCGA-A3-A6NI-01A
0 years, male, black or african american, stage:Stage I, alive, 1018 days
37.5
TCGA-CJ-6031-01A
0 years, male, white, stage:Stage I, alive, 1906 days
36.7
TCGA-BP-4970-01A
0 years, male, asian, stage:Stage III, alive, 433 days
36.4
TCGA-BP-4776-01A
0 years, male, white, stage:Stage I, alive, 411 days
36.3
TCGA-BP-4765-01A
0 years, male, white, stage:Stage I, alive, 2184 days
36.3
TCGA-B8-4621-01A
0 years, male, black or african american, stage:Stage I, alive, 788 days
35.8
TCGA-B8-4622-01A
0 years, male, white, stage:Stage IV, alive, 1525 days
35.3
TCGA-BP-4349-01A
0 years, female, white, stage:Stage I, alive, 372 days
34.8
TCGA-B0-4852-01A
0 years, female, white, stage:Stage II, dead, 1121 days
34.6
TCGA-BP-4974-01A
0 years, male, white, stage:Stage IV, dead, 211 days
34.5
TCGA-BP-4981-01A
0 years, female, white, stage:Stage III, dead, 1097 days
33.9
TCGA-B0-5075-01A
0 years, female, white, stage:Stage III, dead, 637 days
33.9
TCGA-B0-5100-01A
0 years, male, black or african american, stage:Stage III, dead, 1913 days
33.5
TCGA-B0-5081-01A
0 years, female, white, stage:Stage III, dead, 362 days
33.4
TCGA-B8-5159-01A
0 years, female, white, stage:Stage I, alive, 722 days
33.3
TCGA-B0-5700-01A
0 years, male, white, stage:Stage I, alive, 1790 days
32.6
TCGA-B8-A7U6-01A
0 years, female, black or african american, stage:Stage I, alive, 495 days
32.5
TCGA-B0-5697-01A
0 years, male, white, stage:Stage I, alive, 2630 days
32.4
TCGA-B0-4817-01A
0 years, male, white, stage:Stage III, dead, 1019 days
32.3
TCGA-BP-4343-01A
0 years, male, white, stage:Stage III, dead, 1912 days
32.2
TCGA-BP-4335-01A
0 years, female, white, stage:Stage IV, dead, 475 days
32.1
TCGA-A3-3385-01A
0 years, female, white, stage:Stage I, alive, 1993 days
32.1
TCGA-BP-5175-01A
0 years, male, white, stage:Stage I, alive, 932 days
31.5
TCGA-CZ-4856-01A
0 years, female, white, stage:Stage I, alive, 18 days
30.6
TCGA-B0-5121-01A
0 years, male, white, stage:Stage I, alive, 1485 days
30.5
TCGA-CJ-4873-01A
0 years, female, white, stage:Stage III, alive, 1776 days
29.9
TCGA-BP-4347-01A
0 years, male, white, stage:Stage III, alive, 1367 days
29.9
TCGA-CZ-4854-01A
0 years, male, white, stage:Stage I, dead, 1404 days
29.6
TCGA-B0-4718-01A
0 years, male, white, stage:Stage III, alive, 1778 days
29.4
TCGA-CJ-4636-01A
0 years, male, white, stage:Stage III, alive, 1924 days
29.1
TCGA-B0-4836-01A
0 years, male, white, stage:Stage IV, dead, 1238 days
29.0
TCGA-B0-5080-01A
0 years, male, white, stage:Stage IV, dead, 342 days
28.4
TCGA-B0-4841-01A
0 years, male, white, stage:Stage IV, dead, 204 days
28.4
TCGA-CJ-4868-01A
0 years, male, white, stage:Stage IV, dead, 646 days
28.3
TCGA-CJ-4888-01A
0 years, male, white, stage:Stage IV, dead, 1567 days
28.1
TCGA-BP-4167-01A
0 years, male, white, stage:Stage III, alive, 2718 days
28.1
TCGA-BP-5190-01A
0 years, male, white, stage:Stage I, alive, 1011 days
27.8
TCGA-B0-5706-01A
0 years, male, white, stage:Stage II, alive, 3205 days
27.3
TCGA-CZ-4860-01A
0 years, male, white, stage:Stage IV, dead, 206 days
27.2
TCGA-CJ-4904-01A
0 years, female, white, stage:Stage IV, alive, 3302 days
26.7
TCGA-B0-4843-01A
0 years, male, white, stage:Stage III, dead, 320 days
26.6
TCGA-A3-3374-01A
0 years, female, black or african american, stage:Stage I, alive, 1314 days
26.3
TCGA-B0-5085-01A
0 years, female, white, stage:Stage III, dead, 770 days
26.0
TCGA-B0-5709-01A
0 years, female, white, stage:Stage III, alive, 3974 days
25.7
TCGA-B0-5707-01A
0 years, female, white, stage:Stage I, alive, 3744 days
25.6
TCGA-B2-3923-01A
0 years, male, white, stage:Stage II, alive, 992 days
24.7
TCGA-A3-3349-01A
0 years, female, white, stage:Stage I, alive, 1385 days
24.7
TCGA-BP-4170-01A
0 years, female, white, stage:Stage I, dead, 2343 days
24.6
TCGA-CJ-4897-01A
0 years, female, white, stage:Stage III, alive, 3341 days
24.5
TCGA-B0-4823-01A
0 years, male, white, stage:Stage I, dead, 454 days
24.4
TCGA-CJ-4870-01A
0 years, female, black or african american, stage:Stage III, alive, 1498 days
24.4
TCGA-A3-3378-01A
0 years, male, white, stage:Stage I, alive, 630 days
24.1
TCGA-BP-5168-01A
0 years, male, white, stage:Stage I, dead, 1463 days
24.1
TCGA-B8-A54I-01A
0 years, male, black or african american, stage:Stage I, alive, 150 days
23.8
TCGA-BP-5008-01A
0 years, male, white, stage:Stage I, alive, 1071 days
23.8
TCGA-B0-5691-01A
0 years, female, white, stage:Stage I, alive, 3431 days
23.6
TCGA-B0-5695-01A
0 years, female, white, stage:Stage I, alive, 2150 days
22.9
TCGA-B0-5106-01A
0 years, male, white, stage:Stage I, dead, 1598 days
22.7
TCGA-BP-5185-01A
0 years, male, white, stage:Stage I, alive, 1132 days
22.6
TCGA-BP-4993-01A
0 years, male, white, stage:Stage I, alive, 177 days
22.4
TCGA-B0-4819-01A
0 years, female, white, stage:Stage IV, dead, 183 days
22.3
TCGA-CJ-4643-01A
0 years, female, white, stage:Stage II, alive, 1793 days
21.9
TCGA-B8-A8YJ-01A
0 years, female, black or african american, stage:Stage I, alive, 431 days
21.7
TCGA-B8-5553-01A
0 years, female, white, stage:Stage I, alive, 435 days
21.5
TCGA-BP-4971-01A
0 years, male, white, stage:Stage III, alive, 1487 days
21.5
TCGA-A3-A6NL-01A
0 years, female, black or african american, stage:Stage I, alive, 689 days
21.4
TCGA-B0-5713-01A
0 years, female, white, stage:Stage III, alive, 2782 days
20.6
TCGA-B4-5832-01A
0 years, male, white, stage:Stage III, alive, 155 days
20.2
TCGA-3Z-A93Z-01A
0 years, male, black or african american, stage:Stage I, alive, 385 days
20.2
TCGA-CW-5591-01A
0 years, male, white, stage:Stage IV, alive, 2271 days
20.0
TCGA-B0-5113-01A
0 years, female, white, stage:Stage III, alive, 1175 days
20.0
TCGA-BP-4758-01A
0 years, male, white, stage:Stage I, alive, 2208 days
19.8
TCGA-CJ-4918-01A
0 years, male, white, stage:Stage IV, dead, 93 days
19.5
TCGA-CJ-4638-01A
0 years, female, white, stage:Stage IV, dead, 431 days
19.1
TCGA-AK-3426-01A
0 years, male, white, stage:Stage III, dead, 885 days
19.1
TCGA-A3-A6NJ-01A
0 years, female, black or african american, stage:Stage I, alive, 468 days
19.1
TCGA-B0-4821-01A
0 years, female, asian, stage:Stage III, dead, 1230 days
19.0
TCGA-BP-5182-01A
0 years, male, white, stage:Stage I, alive, 1165 days
18.9
TCGA-B0-4842-01A
0 years, female, white, stage:Stage III, dead, 1724 days
18.5
TCGA-BP-5173-01A
0 years, male, white, stage:Stage I, dead, 62 days
17.9
TCGA-BP-4790-01A
0 years, male, white, stage:Stage I, dead, 1111 days
17.8
TCGA-BP-4807-01A
0 years, male, white, stage:Stage I, alive, 211 days
17.7
TCGA-B0-4818-01A
0 years, female, white, stage:Stage II, dead, 510 days
17.1
TCGA-B0-4811-01A
0 years, male, white, stage:Stage III, dead, 1417 days
17.0
TCGA-CW-6097-01A
0 years, male, white, stage:Stage III, dead, 571 days
16.8
TCGA-B0-5108-01A
0 years, male, white, stage:Stage III, alive, 1782 days
16.7
TCGA-CJ-4881-01A
0 years, male, white, stage:Stage III, alive, 2014 days
16.7
TCGA-BP-4983-01A
0 years, female, asian, stage:Stage III, alive, 1413 days
16.4
TCGA-BP-4327-01A
0 years, female, white, stage:Stage II, dead, 109 days
16.4
TCGA-AK-3440-01A
0 years, male, white, stage:Stage I, alive, 2865 days
16.0
TCGA-CW-5585-01A
0 years, male, white, stage:Stage IV, alive, 2609 days
15.5
TCGA-B2-4102-01A
0 years, male, white, stage:Stage I, alive, 952 days
15.5
TCGA-A3-3362-01A
0 years, female, white, stage:Stage I, alive, 1559 days
15.3
TCGA-B8-4148-01A
0 years, female, white, stage:Stage I, alive, 1520 days
14.8
TCGA-G6-A8L7-01A
0 years, female, black or african american, stage:Stage I, alive, 2133 days
14.7
TCGA-B8-4619-01A
0 years, male, white, stage:Stage I, alive, 523 days
14.5
TCGA-CJ-4892-01A
0 years, female, white, stage:Stage I, alive, 1521 days
13.8
TCGA-BP-4968-01A
0 years, male, white, stage:Stage I, alive, 1746 days
13.6
TCGA-CZ-5989-01A
0 years, male, white, stage:Stage II, alive, 1905 days
13.4
TCGA-B0-5705-01A
0 years, female, white, stage:Stage I, alive, 4537 days
12.9
TCGA-BP-5001-01A
0 years, female, white, stage:Stage I, alive, 1177 days
12.9
TCGA-B0-4822-01A
0 years, male, white, stage:Stage II, dead, 1111 days
12.8
TCGA-B4-5377-01A
0 years, female, white, stage:Stage IV, alive, 365 days
12.8
TCGA-B8-A54D-01A
0 years, male, black or african american, stage:Stage III, alive, 830 days
12.7
TCGA-B0-5083-01A
0 years, male, white, stage:Stage I, dead, 1045 days
12.6
TCGA-CJ-4641-01A
0 years, female, white, stage:Stage IV, dead, 1661 days
12.6
TCGA-BP-5201-01A
0 years, male, white, stage:Stage IV, alive, 951 days
12.5
TCGA-AK-3429-01A
0 years, female, white, stage:Stage II, alive, 3328 days
12.3
TCGA-AK-3433-01A
0 years, female, white, stage:Stage II, alive, 3409 days
12.1
TCGA-CJ-4878-01A
0 years, female, white, stage:Stage III, alive, 2186 days
11.9
TCGA-BP-4163-01A
0 years, female, white, stage:Stage III, alive, 2839 days
11.5
TCGA-BP-4962-01A
0 years, male, white, stage:Stage II, alive, 1785 days
11.5
TCGA-B0-4691-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.4
TCGA-CJ-4891-01A
0 years, female, white, stage:Stage III, dead, 819 days
11.4
TCGA-B0-5117-01A
0 years, male, white, stage:Stage I, alive, 1608 days
11.3
TCGA-MW-A4EC-01A
0 years, female, black or african american, stage:Stage I, alive, 498 days
11.1
TCGA-CJ-5686-01A
0 years, female, white, stage:Stage I, alive, 2038 days
11.1
TCGA-MM-A84U-01A
0 years, female, black or african american, stage:Stage I, alive, 700 days
11.1
TCGA-BP-4976-01A
0 years, male, white, stage:Stage I, alive, 1632 days
10.9
TCGA-CW-5580-01A
0 years, female, white, stage:Stage IV, dead, 1964 days
10.3
TCGA-CZ-5459-01A
0 years, male, white, stage:Stage III, alive, 1683 days
9.2
TCGA-AK-3450-01A
0 years, female, white, stage:Stage I, alive, 1508 days
9.1
TCGA-CJ-5680-01A
0 years, female, white, stage:Stage IV, dead, 768 days
9.0
TCGA-BP-4334-01A
0 years, male, white, stage:Stage III, dead, 645 days
8.6
TCGA-BP-5009-01A
0 years, male, white, stage:Stage I, dead, 1092 days
8.6
TCGA-B2-4098-01A
0 years, female, black or african american, stage:Stage I, dead, 51 days
8.4
TCGA-BP-4325-01A
0 years, female, white, stage:Stage I, alive, 2964 days
8.4
TCGA-CZ-5985-01A
0 years, male, white, stage:Stage II, alive, 1997 days
8.1
TCGA-AK-3447-01A
0 years, male, white, stage:Stage II, alive, 1217 days
7.9
TCGA-BP-5010-01A
0 years, male, white, stage:Stage III, dead, 878 days
7.9
TCGA-A3-3357-01A
0 years, male, white, stage:Stage II, alive, 2688 days
7.9
TCGA-B0-4813-01A
0 years, male, white, stage:Stage III, dead, 18 days
7.8
TCGA-AK-3427-01A
0 years, male, white, stage:Stage I, alive, 3583 days
7.0
TCGA-B0-4713-01A
0 years, female, white, stage:Stage III, dead, 202 days
6.8
TCGA-BP-4164-01A
0 years, female, white, stage:Stage III, dead, 992 days
6.0
TCGA-B0-4834-01A
0 years, male, white, stage:Stage I, dead, 2090 days
5.6
TCGA-BP-5004-01A
0 years, male, white, stage:Stage I, alive, 1126 days
5.0
TCGA-AK-3451-01A
0 years, male, white, stage:Stage II, alive, 2868 days
4.7
TCGA-CZ-4866-01A
0 years, female, white, stage:Stage I, alive, 3267 days
4.3
TCGA-B0-5107-01A
0 years, female, white, stage:Stage IV, dead, 927 days
4.0
TCGA-BP-4992-01A
0 years, male, white, stage:Stage I, alive, 501 days
2.8
TCGA-G6-A5PC-01A
0 years, female, black or african american, stage:Stage IV, dead, 242 days
2.2
TCGA-BP-4352-01A
0 years, female, white, stage:Stage IV, dead, 344 days
1.7
TCGA-AK-3443-01A
0 years, male, white, stage:Stage II, alive, 1423 days
1.1
TCGA-B0-5702-01A
0 years, male, white, stage:Stage I, alive, 2172 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
H2BC12 is not prognostic in Kidney Renal Clear Cell Carcinoma (validation)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
61.7
Number of samples
100
Samples
Sample
Description
TPM
ccRCC-6
0 years, male, NA, stage:pT1bN0M0, alive, 2820 days
221.1
ccRCC-51
0 years, male, NA, stage:pT3aN0M0, alive, 1410 days
183.9
ccRCC-67
0 years, male, NA, stage:pT1aN0M0, dead, 1260 days
169.5
ccRCC-71
0 years, male, NA, stage:pT1bN0M0, alive, 2160 days
164.2
ccRCC-97
0 years, male, NA, stage:pT1aN2M1, dead, 990 days
157.6
ccRCC-80
0 years, male, NA, stage:pT2N0M0, alive, 3000 days
149.9
ccRCC-87
0 years, male, NA, stage:pT1bN0M0, alive, 2370 days
127.6
ccRCC-98
0 years, male, NA, stage:pT1aN0M0, alive, 30 days
115.5
ccRCC-59
0 years, male, NA, stage:pT1bN0M0, alive, 930 days
115.4
ccRCC-13
0 years, female, NA, stage:pT3aN2M0, dead, 540 days
113.6
ccRCC-4
0 years, male, NA, stage:pT1bN0M0, dead, 270 days
111.1
ccRCC-7
0 years, female, NA, stage:pT2N0M0, alive, 330 days
110.5
ccRCC-3
0 years, male, NA, stage:pT3bN1M0, dead, 240 days
109.4
ccRCC-77
0 years, male, NA, stage:pT1bN0M0, alive, 1860 days
105.4
ccRCC-88
0 years, male, NA, stage:pT1aN0M0, alive, 2880 days
97.9
ccRCC-83
0 years, male, NA, stage:pT1aN0M0, alive, 300 days
95.6
ccRCC-73
0 years, male, NA, stage:pT1aN0M0, alive, 2640 days
94.3
ccRCC-78
0 years, female, NA, stage:pT1aN0M0, alive, 2610 days
93.6
ccRCC-21
0 years, male, NA, stage:pT1bN0M0, alive, 1080 days
92.8
ccRCC-85
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
90.8
ccRCC-72
0 years, male, NA, stage:pT1bN0M0, alive, 2760 days
90.5
ccRCC-79
0 years, male, NA, stage:pT1bN0M0, alive, 2670 days
90.4
ccRCC-46
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
89.0
ccRCC-96
0 years, male, NA, stage:pT1aN0M0, alive, 3930 days
87.3
ccRCC-84
0 years, male, NA, stage:pT1bN0M0, alive, 2010 days
86.5
ccRCC-24
0 years, male, NA, stage:pT3bN0M0, dead, 750 days
83.6
ccRCC-15
0 years, female, NA, stage:pT2N0M0, dead, 2070 days
83.1
ccRCC-70
0 years, male, NA, stage:pT4N0M1, dead, 540 days
80.8
ccRCC-17
0 years, female, NA, stage:pT1bN0M0, alive, 2220 days
79.1
ccRCC-62
0 years, male, NA, stage:pT1bN0M0, alive, 1620 days
75.0
ccRCC-56
0 years, male, NA, stage:pT1aN0M0, alive, 1950 days
74.5
ccRCC-25
0 years, male, NA, stage:pT1aN0M0, alive, 1350 days
74.2
ccRCC-94
0 years, male, NA, stage:pT1bN0M0, dead, 480 days
73.9
ccRCC-86
0 years, female, NA, stage:pT1bN0M0, alive, 3390 days
73.8
ccRCC-65
0 years, male, NA, stage:pT3bN0M1, dead, 300 days
73.0
ccRCC-40
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
71.5
ccRCC-9
0 years, male, NA, stage:pT2N1M1, dead, 360 days
69.7
ccRCC-100
0 years, male, NA, stage:pT1aN0M0, alive, 4260 days
66.3
ccRCC-1
0 years, female, NA, stage:pT1bN0M0, alive, 3330 days
64.0
ccRCC-30
0 years, male, NA, stage:pT2N0M0, dead, 420 days
63.8
ccRCC-32
0 years, male, NA, stage:pT2N0M0, dead, 1320 days
62.1
ccRCC-64
0 years, male, NA, stage:pT3aN0M0, alive, 2430 days
61.0
ccRCC-58
0 years, male, NA, stage:pT1aN0M0, alive, 1110 days
60.9
ccRCC-22
0 years, male, NA, stage:pT3bN0M0, dead, 330 days
58.1
ccRCC-95
0 years, male, NA, stage:pT1bN0M0, alive, 3960 days
57.6
ccRCC-92
0 years, male, NA, stage:pT1aN0M0, alive, 3660 days
55.2
ccRCC-20
0 years, female, NA, stage:pT3aN0M1, alive, 930 days
53.9
ccRCC-10
0 years, male, NA, stage:pT3aN2M1, dead, 90 days
51.2
ccRCC-8
0 years, male, NA, stage:pT1bN0M0, alive, 2400 days
50.0
ccRCC-105
0 years, male, NA, stage:pT1aN0M0, alive, 2190 days
49.5
ccRCC-104
0 years, female, NA, stage:pT1aN0M0, alive, 3480 days
48.6
ccRCC-50
0 years, male, NA, stage:pT3bN0M0, alive, 900 days
47.7
ccRCC-89
0 years, male, NA, stage:pT1aN0M0, alive, 3510 days
47.6
ccRCC-48
0 years, male, NA, stage:pT1bN0M0, alive, 990 days
46.2
ccRCC-82
0 years, male, NA, stage:pT1aN0M0, alive, 3090 days
44.7
ccRCC-19
0 years, female, NA, stage:pT2N0M0, alive, 2100 days
44.4
ccRCC-81
0 years, male, NA, stage:pT3aN2M0, dead, 1290 days
44.2
ccRCC-39
0 years, male, NA, stage:pT2N0M0, alive, 900 days
44.1
ccRCC-54
0 years, male, NA, stage:pT1bN0M0, alive, 1200 days
43.9
ccRCC-43
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
43.4
ccRCC-5
0 years, male, NA, stage:pT1aN0M0, alive, 2940 days
43.4
ccRCC-68
0 years, male, NA, stage:pT1bN0M0, alive, 2640 days
42.4
ccRCC-44
0 years, female, NA, stage:pT1bN0M0, alive, 1050 days
40.4
ccRCC-75
0 years, male, NA, stage:pT3aN1M1, dead, 180 days
39.9
ccRCC-12
0 years, male, NA, stage:pT1aN0M0, alive, 900 days
39.5
ccRCC-42
0 years, male, NA, stage:pT3aN0M0, alive, 1170 days
39.4
ccRCC-102
0 years, male, NA, stage:pT1bN0M0, alive, 4260 days
39.0
ccRCC-103
0 years, female, NA, stage:pT1aN0M0, alive, 4350 days
38.9
ccRCC-31
0 years, male, NA, stage:pT1aN0M0, alive, 1560 days
38.8
ccRCC-69
0 years, male, NA, stage:pT1aN0M0, alive, 2670 days
38.3
ccRCC-38
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
37.7
ccRCC-18
0 years, female, NA, stage:pT1aN0M0, alive, 2130 days
36.7
ccRCC-90
0 years, male, NA, stage:pT1aN0M0, dead, 1170 days
36.4
ccRCC-61
0 years, male, NA, stage:pT1aN0M0, alive, 1470 days
34.5
ccRCC-66
0 years, female, NA, stage:pT3bN0M1, alive, 2520 days
33.3
ccRCC-11
0 years, male, NA, stage:pT1aN0M0, alive, 2370 days
33.0
ccRCC-52
0 years, female, NA, stage:pT3bN0M1, alive, 1350 days
33.0
ccRCC-55
0 years, female, NA, stage:pT3bN0M0, alive, 1260 days
32.7
ccRCC-36
0 years, male, NA, stage:pT2N0M0, alive, 1410 days
31.4
ccRCC-35
0 years, male, NA, stage:pT1aN0M0, alive, 1380 days
29.4
ccRCC-14
0 years, male, NA, stage:pT3cN0M0, alive, 2280 days
28.6
ccRCC-106
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
25.4
ccRCC-34
0 years, male, NA, stage:pT3bN0M1, alive, 1530 days
25.0
ccRCC-91
0 years, male, NA, stage:pT1aN0M0, dead, 1890 days
24.5
ccRCC-60
0 years, female, NA, stage:pT1aN0M0, alive, 1470 days
23.9
ccRCC-16
0 years, male, NA, stage:pT2N0M0, alive, 2190 days
22.9
ccRCC-99
0 years, female, NA, stage:pT2N0M0, alive, 3330 days
22.3
ccRCC-28
0 years, male, NA, stage:pT1bN0M0, alive, 1530 days
22.3
ccRCC-26
0 years, male, NA, stage:pT1bN0M0, alive, 1800 days
20.5
ccRCC-49
0 years, male, NA, stage:pT3bN0M0, alive, 1290 days
20.4
ccRCC-41
0 years, male, NA, stage:pT3bN0M0, dead, 540 days
19.3
ccRCC-27
0 years, male, NA, stage:pT1aN0M0, alive, 1590 days
15.4
ccRCC-53
0 years, male, NA, stage:pT1aN0M0, alive, 1260 days
15.0
ccRCC-29
0 years, female, NA, stage:pT1aN0M0, alive, 1710 days
14.3
ccRCC-76
0 years, female, NA, stage:pT3aN0M1, dead, 960 days
14.1
ccRCC-45
0 years, male, NA, stage:pT1aN0M0, alive, 1020 days
10.1
ccRCC-2
0 years, male, NA, stage:pT1aN0M1, dead, 2190 days
9.2
ccRCC-23
0 years, male, NA, stage:pT1bN0M0, alive, 1170 days
7.5
ccRCC-37
0 years, female, NA, stage:pT1aN0M0, alive, 1500 days
6.5
ccRCC-93
0 years, male, NA, stage:pT1bN0M0, alive, 3660 days
The Survival Scatter plot shows the clinical status (i.e. dead or alive) for all individuals in the patient cohort, based on the same data that underlies the corresponding Kaplan-Meier plots. Patients that are alive at last time for follow-up are shown in blue and patients who have died during the study are shown in red.
The x-axis shows the expression levels (FPKM) of the investigated gene in the tumor tissue at the time of diagnosis. The y-axis shows the follow-up time after diagnosis (years). Both axes are complimented with kernel density curves demonstrating the data density over the axes. The top density plot shows the expression levels (FPKM) distribution among dead (red) and alive patients (blue). The right density plot shows the data density of the survived years of dead patients with high and low expression levels respectively, stratified using the cutoff indicated by the vertical dashed line through the Survival Scatter plot. This cutoff is automatically defined based on the FPKM cutoff that minimizes the p-score. The cutoff can be changed by dragging the vertical line or by entering a cutoff value in the square labeled "Current cut-off".
Under the Survival Scatter plot the p-score landscape (black curve; left axis) is shown together with dead median separation (red curve; right axis). Dead median separation is the difference in median mRNA expression between patients who have died with high and low expression, respectively. It is calculated as follows: median FPKM expression of dead patients with high expression - median FPKM expression of dead patients with low expression. This is intended to aid the user in visually exploring custom cutoffs and the associated p-scores and dead median separation.
Individual patient data is displayed and can be filtered by clicking on one or more of the category buttons on the top of the page. Categories describing expression level and patient information include: high, low, alive, dead, female, male and tumor stages. The scale of the x-axis can be toggled between linear and log-scale by clicking on the "x log" button. Mouse-over function shows TCGA ID, patient information and mRNA expression (FPKM) for each patient.
& Survival analysisi
Kaplan-Meier plots summarize results from analysis of correlation between mRNA expression level and patient survival. Patients were divided based on level of expression into one of the two groups "low" (under cut off) or "high" (over cut off). X-axis shows time for survival (years) and y-axis shows the probability of survival, where 1.0 corresponds to 100 percent.
H2BC12 is not prognostic in Kidney Renal Papillary Cell Carcinoma (TCGA)
Stage:
Survival analysis
Current cut offi
Current cut-off shows the cut-off (FPKM) currently selected. It may be changed manually. When the current cut-off is changed, the vertical dashed line indicating cut-off, the interactive survival scatter plot and the Kaplan-Meier curve will be automatically adjusted to show results accordingly.
:
Best expression cut offi
Based on the FPKM value of each gene, patients were classified into two groups and association between prognosis (survival) and gene expression (FPKM) was examined. The best expression cut-off refers the FPKM value that yields maximal difference with regard to survival between the two groups at the lowest log-rank P-value. Best expression cut-off was selected based on survival analysis .
When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the best expression cut-off.
Median expression refers to the median FPKM value calculated based on the gene expression (FPKM) data from all patients in this dataset. When clicking on this number, the vertical dashed line indicating cut-off, the interactive survival plot, and the Kaplan-Meier curve will be adjusted to show results based on the median expression.
Median follow up time refers to the median time (years) after diagnosis with this type of cancer, based on clinical data from all patients in this dataset.
: N/A
P scorei
Log-rank P value for Kaplan-Meier plot showing results from analysis of correlation between mRNA expression level and patient survival.
N/A
5-year survival highi
5-year survival for patients with higher expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
5-year survival lowi
5-year survival for patients with lower expression than the expression cutoff.
For melanoma and glioma, 3-year survival is shown.
N/A
TCGA RNA samplesi
RNA-seq data is reported as average FPKM (number Fragments Per Kilobase of exon per Million reads), generated by the The Cancer Genome Atlas (TCGA) .
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. FPKM values of the individual samples are presented next to the box plot.
Average TPM
31.0
Number of samples
282
Samples
Sample
Description
TPM
TCGA-A4-7915-01A
0 years, female, black or african american, stage:Stage II, alive, 7 days
290.6
TCGA-5P-A9KC-01A
0 years, female, white, stage:'--, alive, 377 days
250.4
TCGA-BQ-5884-01A
0 years, female, black or african american, stage:Stage I, alive, 792 days
218.8
TCGA-BQ-5882-01A
0 years, male, stage:Stage III, dead, 658 days
210.5
TCGA-F9-A8NY-01A
0 years, female, asian, stage:Stage IV, alive, 36 days
204.1
TCGA-HE-7130-01A
female, stage:Stage III, alive, 1770 days
202.8
TCGA-B9-A44B-01A
0 years, male, black or african american, stage:Stage III, alive, 361 days
180.6
TCGA-2Z-A9J8-01A
0 years, male, white, stage:Stage I, alive, 2790 days
152.9
TCGA-G7-6793-01A
0 years, female, white, stage:Stage IV, dead, 336 days
147.3
TCGA-BQ-5875-01A
0 years, female, white, stage:Stage III, alive, 2639 days
140.5
TCGA-BQ-5887-01A
0 years, male, white, stage:Stage III, alive, 771 days
106.9
TCGA-A4-A5Y1-01A
0 years, male, white, stage:Stage III, dead, 395 days
105.4
TCGA-5P-A9K4-01A
0 years, male, white, stage:'--, alive, 2184 days
101.3
TCGA-5P-A9K3-01A
0 years, male, white, stage:'--, dead, 471 days
94.0
TCGA-B9-A8YI-01A
0 years, male, black or african american, stage:Stage I, alive, 374 days
82.8
TCGA-DW-7839-01A
0 years, female, white, stage:Stage I, alive, 419 days
81.8
TCGA-G7-6792-01A
0 years, male, black or african american, stage:Stage I, alive, 2765 days
79.6
TCGA-B1-A656-01A
0 years, male, white, stage:Stage I, alive, 618 days
78.4
TCGA-AL-3467-01A
0 years, female, white, stage:'--, alive, 2135 days
74.7
TCGA-F9-A4JJ-01A
0 years, female, black or african american, stage:Stage III, dead, 325 days
74.0
TCGA-2Z-A9J9-01A
0 years, male, black or african american, stage:Stage I, alive, 2294 days
73.2
TCGA-BQ-5879-01A
0 years, female, white, stage:Stage III, dead, 697 days
71.4
TCGA-UN-AAZ9-01A
0 years, female, black or african american, stage:Stage I, alive, 548 days
69.3
TCGA-UZ-A9PQ-01A
0 years, male, black or african american, stage:Stage III, dead, 2624 days
67.9
TCGA-A4-7585-01A
0 years, male, white, stage:Stage III, dead, 1070 days
65.8
TCGA-BQ-5877-01A
0 years, male, black or african american, stage:Stage IV, dead, 270 days
65.3
TCGA-GL-A9DE-01A
0 years, male, black or african american, stage:Stage I, alive, 496 days
65.0
TCGA-B1-5398-01A
0 years, male, white, stage:Stage III, alive, 1251 days
64.0
TCGA-P4-A5EB-01A
0 years, male, white, stage:Stage I, alive, 2477 days
63.6
TCGA-HE-A5NK-01A
0 years, male, stage:'--, alive, 2228 days
62.9
TCGA-UZ-A9PX-01A
0 years, male, white, stage:Stage I, alive, 1981 days
62.4
TCGA-BQ-7051-01A
0 years, male, white, stage:Stage II, alive, 1533 days
62.3
TCGA-UZ-A9PU-01A
0 years, male, white, stage:Stage I, dead, 933 days
61.7
TCGA-B9-5156-01A
0 years, male, white, stage:'--, alive, 1338 days
61.5
TCGA-WN-A9G9-01A
0 years, male, white, stage:Stage I, alive, 791 days
60.0
TCGA-4A-A93X-01A
0 years, male, white, stage:Stage IV, alive, 390 days
58.4
TCGA-2Z-A9J3-01A
0 years, male, white, stage:Stage II, dead, 1771 days
57.6
TCGA-HE-7129-01A
male, stage:Stage II, alive, 2492 days
57.2
TCGA-DZ-6131-01A
0 years, male, white, stage:Stage III, alive, 2429 days
56.8
TCGA-HE-A5NH-01A
0 years, male, stage:Stage I, alive, 791 days
54.1
TCGA-2Z-A9JJ-01A
0 years, female, white, stage:Stage I, alive, 1213 days
54.0
TCGA-A4-7583-01A
0 years, male, black or african american, stage:Stage I, alive, 3 days
54.0
TCGA-P4-A5E8-01A
0 years, male, white, stage:Stage III, dead, 1306 days
53.4
TCGA-GL-A9DC-01A
0 years, female, white, stage:Stage I, alive, 392 days
53.4
TCGA-BQ-5888-01A
0 years, female, white, stage:Stage I, alive, 403 days
52.5
TCGA-BQ-7058-01A
0 years, male, white, stage:Stage III, dead, 343 days
52.4
TCGA-2Z-A9JO-01A
0 years, female, black or african american, stage:Stage I, alive, 949 days
50.9
TCGA-A4-7288-01A
0 years, female, white, stage:'--, alive, 1857 days
50.7
TCGA-Y8-A897-01A
0 years, female, white, stage:Stage I, alive, 549 days
50.5
TCGA-P4-A5E7-01A
0 years, female, white, stage:Stage I, alive, 2649 days
50.5
TCGA-GL-A59T-01A
0 years, male, white, stage:Stage I, alive, 546 days
49.5
TCGA-GL-7966-01A
0 years, female, white, stage:Stage III, alive, 112 days
49.0
TCGA-SX-A7SM-01A
0 years, male, black or african american, stage:Stage IV, dead, 363 days
49.0
TCGA-BQ-7061-01A
0 years, female, white, stage:Stage I, alive, 218 days
48.2
TCGA-5P-A9JW-01A
0 years, male, white, stage:'--, alive, 3241 days
46.5
TCGA-UZ-A9Q1-01A
0 years, female, white, stage:Stage I, alive, 730 days
46.5
TCGA-IA-A83T-01A
0 years, male, white, stage:'--, dead, 2684 days
46.3
TCGA-BQ-5892-01A
0 years, male, white, stage:Stage I, alive, 364 days
45.9
TCGA-UZ-A9PR-01A
0 years, male, white, stage:Stage I, alive, 2191 days
45.4
TCGA-2K-A9WE-01A
0 years, male, white, stage:Stage II, alive, 214 days
45.0
TCGA-EV-5903-01A
0 years, male, white, stage:Stage I, alive, 757 days
44.6
TCGA-UZ-A9PN-01A
0 years, male, white, stage:Stage III, dead, 1136 days
43.7
TCGA-B1-7332-01A
0 years, female, black or african american, stage:Stage II, alive, 1141 days
43.5
TCGA-2Z-A9JL-01A
0 years, male, black or african american, stage:Stage I, alive, 1006 days
43.4
TCGA-A4-A5XZ-01A
0 years, female, white, stage:Stage II, alive, 479 days
40.4
TCGA-Y8-A8RZ-01A
0 years, male, white, stage:Stage I, alive, 205 days
39.7
TCGA-SX-A7SN-01A
0 years, male, white, stage:Stage I, alive, 578 days
39.1
TCGA-BQ-5894-01A
0 years, male, stage:Stage IV, alive, 84 days
38.5
TCGA-2Z-A9J2-01A
0 years, female, white, stage:Stage I, alive, 1795 days
37.7
TCGA-P4-A5E6-01A
0 years, male, black or african american, stage:Stage III, alive, 3035 days
37.3
TCGA-4A-A93Y-01A
0 years, female, black or african american, stage:Stage II, alive, 352 days
37.1
TCGA-SX-A7SQ-01A
0 years, male, white, stage:Stage I, alive, 1266 days
35.9
TCGA-B1-A657-01A
0 years, male, white, stage:Stage I, alive, 641 days
35.8
TCGA-5P-A9KF-01A
0 years, male, white, stage:'--, alive, 845 days
35.2
TCGA-2Z-A9JR-01A
0 years, male, white, stage:Stage I, alive, 161 days
34.9
TCGA-UZ-A9PO-01A
0 years, male, white, stage:Stage I, alive, 1911 days
34.5
TCGA-MH-A55W-01A
0 years, male, black or african american, stage:Stage I, alive, 1043 days
34.2
TCGA-HE-A5NF-01A
0 years, male, stage:Stage I, alive, 2582 days
34.0
TCGA-AT-A5NU-01A
0 years, male, white, stage:Stage I, alive, 67 days
33.9
TCGA-BQ-5878-01A
0 years, female, white, stage:Stage III, alive, 1938 days
33.7
TCGA-B3-8121-01A
0 years, female, black or african american, stage:Stage I, alive, 379 days
33.6
TCGA-SX-A7SP-01A
0 years, female, white, stage:Stage I, dead, 496 days
33.3
TCGA-UZ-A9PJ-01A
0 years, male, white, stage:Stage I, dead, 797 days
33.3
TCGA-SX-A71U-01A
0 years, male, white, stage:Stage I, alive, 1357 days
33.2
TCGA-G7-6789-01A
0 years, female, white, stage:Stage IV, dead, 122 days
32.9
TCGA-B9-5155-01A
0 years, male, white, stage:Stage III, alive, 665 days
32.7
TCGA-A4-8515-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 709 days
32.7
TCGA-5P-A9K0-01A
0 years, male, white, stage:'--, alive, 677 days
32.4
TCGA-A4-7286-01A
0 years, male, white, stage:'--, alive, 554 days
32.2
TCGA-B9-4117-01A
0 years, female, black or african american, stage:'--, alive, 14 days
32.2
TCGA-5P-A9KA-01A
0 years, male, white, stage:'--, alive, 395 days
32.1
TCGA-BQ-5889-01A
0 years, male, white, stage:Stage IV, dead, 329 days
31.8
TCGA-B1-A47M-01A
0 years, male, black or african american, stage:Stage III, alive, 659 days
31.5
TCGA-A4-7828-01A
0 years, female, black or african american, stage:Stage I, alive, 238 days
31.3
TCGA-A4-8516-01A
0 years, male, white, stage:Stage III, alive, 23 days
31.2
TCGA-A4-7287-01A
0 years, female, white, stage:Stage I, dead, 597 days
30.9
TCGA-BQ-5880-01A
0 years, male, white, stage:Stage III, dead, 1314 days
30.8
TCGA-EV-5901-01A
0 years, female, white, stage:Stage I, alive, 1040 days
30.3
TCGA-BQ-7056-01A
0 years, female, white, stage:Stage III, alive, 612 days
30.2
TCGA-DZ-6132-01A
0 years, male, stage:Stage I, alive, 2460 days
30.2
TCGA-J7-8537-01A
0 years, female, asian, stage:Stage III, dead, 321 days
30.1
TCGA-5P-A9K9-01A
0 years, female, white, stage:'--, dead, 589 days
30.0
TCGA-2Z-A9JS-01A
0 years, male, white, stage:Stage I, dead, 492 days
29.8
TCGA-Y8-A898-01A
0 years, male, white, stage:Stage I, alive, 475 days
29.7
TCGA-GL-A59R-01A
0 years, male, white, stage:Stage III, alive, 378 days
29.6
TCGA-Y8-A8S0-01A
0 years, male, white, stage:Stage I, alive, 183 days
29.2
TCGA-IA-A83V-01A
0 years, male, white, stage:Stage I, dead, 2941 days
28.9
TCGA-DZ-6135-01A
0 years, male, stage:Stage I, alive, 2269 days
28.7
TCGA-SX-A71W-01A
0 years, male, white, stage:Stage I, alive, 1076 days
28.5
TCGA-BQ-7059-01A
0 years, male, white, stage:Stage I, alive, 232 days
28.1
TCGA-GL-A9DD-01A
0 years, male, white, stage:Stage I, alive, 341 days
27.5
TCGA-IA-A83W-01A
0 years, male, white, stage:Stage I, dead, 2043 days
26.9
TCGA-G7-A8LE-01A
0 years, male, white, stage:Stage I, alive, 2453 days
26.8
TCGA-B3-3926-01A
0 years, female, white, stage:Stage I, alive, 883 days
26.8
TCGA-DW-7838-01A
0 years, male, white, stage:Stage I, alive, 744 days
26.3
TCGA-Y8-A894-01A
0 years, female, white, stage:Stage I, alive, 567 days
26.2
TCGA-IZ-A6M8-01A
0 years, male, black or african american, stage:Stage I, alive, 497 days
26.1
TCGA-Y8-A895-01A
0 years, male, white, stage:Stage I, alive, 484 days
26.1
TCGA-SX-A7SU-01A
0 years, male, stage:Stage I, alive, 1331 days
25.9
TCGA-BQ-7049-01A
0 years, female, white, stage:Stage I, dead, 1364 days
25.9
TCGA-2Z-A9J6-01A
0 years, male, white, stage:Stage I, alive, 1731 days
25.7
TCGA-B3-3925-01A
0 years, male, white, stage:Stage III, alive, 1029 days
24.9
TCGA-BQ-7062-01A
0 years, male, black or african american, stage:Stage I, alive, 116 days
24.7
TCGA-GL-7773-01A
0 years, male, white, stage:Stage I, alive, 393 days
24.0
TCGA-IZ-8196-01A
0 years, male, white, stage:Stage I, alive, 649 days
23.9
TCGA-BQ-7044-01A
0 years, male, white, stage:Stage III, alive, 3760 days
23.5
TCGA-DW-7842-01A
0 years, male, white, stage:Stage I, alive, 92 days
23.4
TCGA-P4-AAVM-01A
0 years, male, white, stage:Stage I, alive, 1539 days
23.3
TCGA-AL-3466-01A
0 years, male, white, stage:Stage IV, dead, 293 days
22.8
TCGA-UZ-A9PK-01A
0 years, male, white, stage:Stage I, alive, 3571 days
22.8
TCGA-2Z-A9JD-01A
0 years, male, white, stage:Stage I, alive, 1060 days
22.8
TCGA-MH-A560-01A
0 years, male, white, stage:Stage I, alive, 924 days
22.7
TCGA-B9-A69E-01A
0 years, male, white, stage:Stage III, alive, 452 days
22.6
TCGA-5P-A9JZ-01A
0 years, female, white, stage:'--, alive, 2744 days
22.3
TCGA-KV-A6GD-01A
0 years, male, white, stage:Stage I, alive, 560 days
22.0
TCGA-IZ-8195-01A
0 years, male, white, stage:Stage II, alive, 677 days
21.8
TCGA-B9-4116-01A
0 years, female, black or african american, stage:'--, alive, 627 days
21.5
TCGA-5P-A9KH-01A
0 years, male, white, stage:'--, alive, 2051 days
21.3
TCGA-DW-7836-01A
0 years, male, white, stage:Stage I, alive, 1093 days
21.0
TCGA-EV-5902-01A
0 years, male, white, stage:Stage I, alive, 578 days
20.9
TCGA-B9-4115-01A
0 years, male, black or african american, stage:Stage I, alive, 803 days
19.9
TCGA-Y8-A8RY-01A
0 years, male, white, stage:Stage I, alive, 769 days
19.7
TCGA-DW-7841-01A
0 years, male, black or african american, stage:Stage I, alive, 445 days
19.6
TCGA-A4-8630-01A
0 years, female, white, stage:Stage I, alive, 436 days
19.4
TCGA-P4-A5EA-01A
0 years, female, white, stage:Stage III, dead, 201 days
19.4
TCGA-PJ-A5Z8-01A
0 years, female, white, stage:Stage I, alive, 600 days
19.2
TCGA-MH-A561-01A
0 years, male, white, stage:Stage I, alive, 841 days
19.1
TCGA-DW-7837-01A
0 years, male, black or african american, stage:Stage I, alive, 1142 days
19.0
TCGA-DW-7840-01A
0 years, male, black or african american, stage:Stage I, alive, 114 days
18.9
TCGA-A4-8518-01A
0 years, male, white, stage:Stage I, alive, 600 days
18.8
TCGA-HE-A5NL-01A
0 years, male, stage:Stage I, alive, 767 days
18.6
TCGA-5P-A9JU-01A
0 years, male, white, stage:Stage III, alive, 373 days
18.5
TCGA-5P-A9JY-01A
0 years, male, white, stage:'--, dead, 1508 days
18.4
TCGA-AL-3468-01A
0 years, male, white, stage:Stage II, dead, 2331 days
18.1
TCGA-A4-7997-01A
0 years, male, white, stage:Stage I, alive, 927 days
18.0
TCGA-B9-4113-01A
0 years, male, black or african american, stage:Stage I, dead, 1536 days
17.9
TCGA-Y8-A896-01A
0 years, male, white, stage:Stage III, alive, 567 days
17.8
TCGA-BQ-7060-01A
0 years, male, american indian or alaska native, stage:Stage I, alive, 214 days
17.8
TCGA-B9-4114-01A
0 years, male, black or african american, stage:'--, alive, 857 days
17.7
TCGA-G7-7501-01A
0 years, female, black or african american, stage:Stage III, dead, 624 days
17.7
TCGA-2Z-A9J5-01A
0 years, male, white, stage:Stage II, alive, 3050 days
17.6
TCGA-UZ-A9PZ-01A
0 years, male, white, stage:Stage III, alive, 657 days
17.5
TCGA-SX-A71S-01A
0 years, female, white, stage:Stage I, alive, 1504 days
17.4
TCGA-HE-A5NI-01A
0 years, male, stage:Stage I, alive, 360 days
17.3
TCGA-SX-A7SO-01A
0 years, male, white, stage:Stage I, alive, 1257 days
17.0
TCGA-IA-A40Y-01A
0 years, female, white, stage:Stage III, alive, 62 days
17.0
TCGA-UZ-A9PS-01A
0 years, female, black or african american, stage:Stage II, alive, 2167 days
16.9
TCGA-2Z-A9JP-01A
0 years, male, white, stage:Stage I, alive, 893 days
16.8
TCGA-A4-A4ZT-01A
0 years, female, white, stage:Stage I, alive, 516 days
16.7
TCGA-IZ-A6M9-01A
0 years, male, white, stage:Stage I, alive, 376 days
16.6
TCGA-A4-8517-01A
0 years, male, white, stage:Stage I, alive, 597 days
16.2
TCGA-BQ-5876-01A
0 years, male, white, stage:Stage I, alive, 586 days
15.9
TCGA-IA-A83S-01A
0 years, male, white, stage:'--, dead, 2609 days
15.8
TCGA-BQ-7053-01A
0 years, female, black or african american, stage:Stage III, alive, 1516 days
15.6
TCGA-MH-A856-01A
0 years, male, white, stage:Stage I, alive, 947 days
14.8
TCGA-SX-A7SL-01A
0 years, male, stage:Stage I, alive, 823 days
14.7
TCGA-P4-AAVK-01A
0 years, male, white, stage:Stage III, alive, 1590 days
14.7
TCGA-AL-3472-01A
0 years, male, black or african american, stage:'--, alive, 2029 days
14.3
TCGA-HE-A5NJ-01A
0 years, male, stage:'--, alive, 1726 days
14.1
TCGA-BQ-5890-01A
0 years, male, white, stage:Stage III, alive, 233 days
13.9
TCGA-2Z-A9JG-01A
0 years, male, white, stage:Stage I, alive, 1662 days
13.7
TCGA-B9-A8YH-01A
0 years, male, black or african american, stage:Stage I, alive, 532 days
13.5
TCGA-A4-8311-01A
0 years, male, white, stage:Stage I, alive, 729 days
13.2
TCGA-MH-A55Z-01A
0 years, male, black or african american, stage:Stage I, alive, 845 days
13.1
TCGA-Q2-A5QZ-01A
0 years, female, black or african american, stage:Stage III, alive, 428 days
12.9
TCGA-BQ-5885-01A
0 years, male, white, stage:Stage III, alive, 921 days
12.7
TCGA-2Z-A9J1-01A
0 years, male, white, stage:Stage I, alive, 2298 days
12.3
TCGA-DW-5561-01A
0 years, male, black or african american, stage:Stage I, alive, 414 days
12.1
TCGA-B9-A5W9-01A
0 years, male, white, stage:Stage I, alive, 5 days
11.7
TCGA-2Z-A9J7-01A
0 years, male, white, stage:Stage IV, dead, 139 days
11.6
TCGA-KV-A74V-01A
0 years, male, white, stage:Stage I, alive, 347 days
11.5
TCGA-B3-4104-01A
0 years, male, white, stage:Stage II, alive, 1049 days
11.4
TCGA-IA-A40U-01A
0 years, male, white, stage:Stage III, alive, 511 days
10.9
TCGA-MH-A562-01A
0 years, male, black or african american, stage:Stage I, alive, 616 days
10.9
TCGA-V9-A7HT-01A
0 years, male, black or african american, stage:Stage II, alive, 965 days
10.7
TCGA-BQ-7048-01A
0 years, male, white, stage:Stage III, alive, 2839 days
10.5
TCGA-4A-A93W-01A
0 years, female, white, stage:Stage I, alive, 4 days
10.1
TCGA-O9-A75Z-01A
0 years, male, white, stage:Stage I, alive, 471 days
10.0
TCGA-B9-4617-01A
0 years, male, black or african american, stage:'--, alive, 35 days
9.9
TCGA-SX-A7SR-01A
0 years, male, white, stage:Stage II, alive, 805 days
9.9
TCGA-B1-A47O-01A
0 years, female, white, stage:Stage I, alive, 842 days
9.9
TCGA-G7-6797-01A
0 years, male, white, stage:Stage III, alive, 765 days
9.9
TCGA-A4-8310-01A
0 years, male, white, stage:Stage III, alive, 780 days
9.9
TCGA-UZ-A9PL-01A
0 years, male, white, stage:Stage II, alive, 3152 days
9.6
TCGA-J7-A8I2-01A
0 years, male, asian, stage:Stage I, alive, 307 days
9.3
TCGA-A4-7732-01A
0 years, male, black or african american, stage:'--, alive, 582 days
9.2
TCGA-GL-A4EM-01A
0 years, male, white, stage:Stage I, alive, 32 days
9.1
TCGA-SX-A71V-01A
0 years, male, white, stage:Stage I, alive, 876 days
8.9
TCGA-DZ-6134-01A
0 years, male, white, stage:Stage I, alive, 1856 days
8.8
TCGA-5P-A9JV-01A
0 years, male, white, stage:'--, alive, 2043 days
8.8
TCGA-SX-A71R-01A
0 years, male, white, stage:Stage I, alive, 1457 days
8.6
TCGA-IA-A40X-01A
0 years, female, black or african american, stage:Stage I, alive, 608 days
8.6
TCGA-MH-A857-01A
0 years, male, black or african american, stage:Stage I, alive, 890 days
8.6
TCGA-F9-A97G-01A
0 years, male, asian, stage:Stage III, alive, 13 days
8.6
TCGA-F9-A7Q0-01A
0 years, female, asian, stage:Stage I, alive, 398 days
8.5
TCGA-A4-A6HP-01A
0 years, male, white, stage:Stage I, alive, 379 days
8.4
TCGA-2Z-A9JI-01A
0 years, male, white, stage:Stage III, alive, 1567 days
7.9
TCGA-A4-A5Y0-01A
0 years, female, white, stage:Stage I, alive, 252 days
7.6
TCGA-BQ-7046-01A
0 years, male, white, stage:Stage I, alive, 2948 days
7.5
TCGA-AL-A5DJ-01A
0 years, female, white, stage:Stage III, dead, 1498 days
7.4
TCGA-A4-8312-01A
0 years, male, black or african american, stage:Stage I, alive, 708 days
7.3
TCGA-A4-A57E-01A
0 years, male, white, stage:Stage IV, dead, 258 days
6.6
TCGA-2Z-A9JE-01A
0 years, male, white, stage:Stage I, alive, 1728 days
6.6
TCGA-2Z-A9JM-01A
0 years, male, white, stage:Stage I, alive, 934 days
6.6
TCGA-J7-6720-01A
0 years, male, asian, stage:Stage I, alive, 388 days
6.1
TCGA-KV-A6GE-01A
0 years, male, white, stage:Stage I, alive, 885 days
6.1
TCGA-DW-5560-01A
0 years, female, white, stage:Stage I, alive, 1486 days
5.9
TCGA-P4-A5ED-01A
0 years, male, white, stage:Stage I, alive, 2816 days
5.8
TCGA-2Z-A9JT-01A
0 years, male, white, stage:Stage I, alive, 684 days
5.3
TCGA-PJ-A5Z9-01A
0 years, female, white, stage:Stage I, alive, 540 days
5.2
TCGA-BQ-5886-01A
0 years, male, white, stage:Stage III, alive, 792 days
5.2
TCGA-MH-A854-01A
0 years, female, black or african american, stage:Stage I, alive, 536 days
5.1
TCGA-A4-A5DU-01A
0 years, female, white, stage:Stage I, alive, 496 days
5.0
TCGA-G7-A8LB-01A
0 years, male, white, stage:Stage IV, alive, 547 days
4.7
TCGA-B1-A654-01A
0 years, female, black or african american, stage:Stage I, alive, 616 days
3.9
TCGA-WN-AB4C-01A
0 years, female, white, stage:Stage I, alive, 1188 days
3.0
TCGA-BQ-5893-01A
0 years, male, white, stage:Stage IV, dead, 241 days
2.4
TCGA-G7-6795-01A
0 years, male, white, stage:Stage I, alive, 1194 days
2.2
TCGA-2Z-A9JN-01A
0 years, female, black or african american, stage:Stage I, alive, 740 days
1.8
TCGA-B1-A47N-01A
0 years, male, white, stage:Stage I, alive, 1110 days
1.5
TCGA-F9-A7VF-01A
0 years, female, white, stage:Stage I, alive, 73 days
1.1
TCGA-2Z-A9JQ-01A
0 years, male, white, stage:Stage I, alive, 778 days
1.0
TCGA-P4-AAVO-01A
0 years, male, white, stage:Stage I, alive, 2400 days
0.8
TCGA-BQ-7045-01A
0 years, male, black or african american, stage:Stage I, dead, 1468 days
0.0
TCGA-BQ-7055-01A
0 years, male, white, stage:Stage I, alive, 799 days
0.0
TCGA-DW-7834-01A
0 years, male, white, stage:Stage I, alive, 3950 days
0.0
TCGA-AL-3471-01A
0 years, male, white, stage:Stage I, dead, 1500 days
0.0
TCGA-B9-A5W8-01A
0 years, male, black or african american, stage:Stage II, alive, 524 days
0.0
TCGA-UZ-A9PM-01A
0 years, male, white, stage:Stage II, alive, 3811 days
0.0
TCGA-UZ-A9PV-01A
0 years, male, white, stage:Stage I, alive, 1444 days
0.0
TCGA-BQ-5883-01A
0 years, female, black or african american, stage:Stage I, alive, 1242 days
0.0
TCGA-5P-A9KE-01A
0 years, male, white, stage:'--, alive, 824 days
0.0
TCGA-UZ-A9PP-01A
0 years, male, white, stage:Stage I, alive, 3010 days
0.0
TCGA-BQ-5891-01A
0 years, female, white, stage:Stage III, alive, 29 days
0.0
TCGA-G7-A4TM-01A
0 years, male, black or african american, stage:Stage I, alive, 768 days
0.0
TCGA-G7-A8LD-01A
0 years, male, white, stage:Stage III, dead, 514 days
0.0
TCGA-A4-7734-01A
0 years, female, white, stage:Stage I, alive, 27 days
0.0
TCGA-UZ-A9Q0-01A
0 years, male, white, stage:Stage I, alive, 3368 days
0.0
TCGA-BQ-5881-01A
0 years, male, white, stage:Stage I, alive, 1454 days
0.0
TCGA-AL-3473-01A
0 years, male, white, stage:Stage II, alive, 1906 days
0.0
TCGA-GL-8500-01A
0 years, male, white, stage:Stage I, alive, 841 days
0.0
TCGA-G7-6796-01A
0 years, male, white, stage:Stage I, alive, 2173 days
0.0
TCGA-Y8-A8S1-01A
0 years, male, white, stage:Stage I, alive, 404 days
0.0
TCGA-BQ-7050-01A
0 years, female, white, stage:Stage I, alive, 1864 days
0.0
TCGA-B3-4103-01A
0 years, male, white, stage:Stage I, alive, 930 days
0.0
TCGA-A4-7584-01A
0 years, male, black or african american, stage:Stage I, alive, 650 days
0.0
TCGA-5P-A9K8-01A
0 years, female, white, stage:'--, alive, 1309 days
0.0
TCGA-AL-7173-01A
0 years, female, white, stage:Stage IV, alive, 2060 days
0.0
TCGA-A4-A48D-01A
0 years, male, black or african american, stage:Stage I, alive, 379 days
0.0
TCGA-P4-AAVL-01A
0 years, male, white, stage:Stage III, dead, 487 days
0.0
TCGA-A4-8098-01A
0 years, male, black or african american, stage:Stage I, alive, 896 days
0.0
TCGA-5P-A9K6-01A
0 years, male, white, stage:'--, alive, 1914 days
0.0
TCGA-MH-A855-01A
0 years, female, black or african american, stage:Stage II, alive, 369 days
0.0
TCGA-B9-A5W7-01A
0 years, male, black or african american, stage:Stage I, alive, 585 days
0.0
TCGA-G7-A8LC-01A
0 years, male, white, stage:Stage I, alive, 702 days
0.0
TCGA-SX-A7SS-01A
0 years, male, white, stage:Stage I, alive, 1615 days
0.0
TCGA-DZ-6133-01A
0 years, female, white, stage:Stage I, dead, 1557 days
0.0
TCGA-5P-A9K2-01A
0 years, male, white, stage:'--, alive, 2392 days
0.0
TCGA-B3-A6W5-01A
0 years, male, black or african american, stage:Stage I, alive, 309 days
0.0
TCGA-2Z-A9JK-01A
0 years, male, white, stage:Stage III, alive, 1186 days
0.0
TCGA-B1-A655-01A
0 years, female, white, stage:Stage I, alive, 510 days
0.0
TCGA-GL-6846-01A
0 years, male, white, stage:Stage IV, alive, 5925 days
0.0
Show allShow less
RENAL CELL CARCINOMA - Protein relative expression (CPTAC)
Number of samples
194
Samples
Sample ID
Sample type
nRPX
CPT0026410003
Tumor
N/A
CPT0002370001
Normal
N/A
CPT0000790001
Normal
N/A
CPT0019130003
Tumor
N/A
CPT0088570001
Normal
N/A
CPT0065820001
Normal
N/A
CPT0025880003
Tumor
N/A
CPT0076330003
Tumor
N/A
CPT0001180009
Tumor
N/A
CPT0078800003
Tumor
N/A
CPT0078660003
Tumor
N/A
CPT0065690003
Tumor
N/A
CPT0078930003
Tumor
N/A
CPT0011240003
Tumor
N/A
CPT0084560003
Tumor
N/A
CPT0012670003
Tumor
N/A
CPT0002350011
Tumor
N/A
CPT0012920003
Normal
N/A
CPT0064370003
Tumor
N/A
CPT0088900003
Tumor
N/A
CPT0006730001
Normal
N/A
CPT0007870001
Normal
N/A
CPT0087040003
Tumor
N/A
CPT0079380003
Tumor
N/A
CPT0025170003
Tumor
N/A
CPT0024670003
Tumor
N/A
CPT0012640003
Normal
N/A
CPT0078830003
Tumor
N/A
CPT0021240003
Tumor
N/A
CPT0071150004
Tumor
N/A
CPT0089020003
Tumor
N/A
CPT0088970003
Tumor
N/A
CPT0066480003
Tumor
N/A
CPT0000870016
Tumor
N/A
CPT0092790003
Tumor
N/A
CPT0025610001
Normal
N/A
CPT0063330001
Normal
N/A
CPT0001350001
Normal
N/A
CPT0078940001
Normal
N/A
CPT0086830003
Normal
N/A
CPT0088760003
Tumor
N/A
CPT0092190003
Normal
N/A
CPT0002270011
Tumor
N/A
CPT0088550004
Tumor
N/A
CPT0023710001
Normal
N/A
CPT0077140001
Normal
N/A
CPT0025230003
Tumor
N/A
CPT0025050003
Tumor
N/A
CPT0075720003
Tumor
N/A
CPT0012570003
Normal
N/A
CPT0089040001
Normal
N/A
CPT0017850003
Tumor
N/A
CPT0019990003
Tumor
N/A
CPT0012900004
Tumor
N/A
CPT0000780007
Tumor
N/A
CPT0023360001
Normal
N/A
CPT0001510001
Normal
N/A
CPT0078840001
Normal
N/A
CPT0010110003
Tumor
N/A
CPT0086890003
Normal
N/A
CPT0092290003
Tumor
N/A
CPT0020120003
Tumor
N/A
CPT0088640003
Normal
N/A
CPT0088500001
Normal
N/A
CPT0069010001
Normal
N/A
CPT0006440003
Tumor
N/A
CPT0063630003
Tumor
N/A
CPT0001550001
Normal
N/A
CPT0086950003
Tumor
N/A
CPT0014350001
Normal
N/A
CPT0014470001
Normal
N/A
CPT0086360003
Tumor
N/A
CPT0069160003
Tumor
N/A
CPT0006950001
Normal
N/A
CPT0007860003
Tumor
N/A
CPT0082010001
Normal
N/A
CPT0079230003
Tumor
N/A
CPT0001340003
Tumor
N/A
CPT0011410003
Tumor
N/A
CPT0079180003
Tumor
N/A
CPT0012080003
Tumor
N/A
CPT0084590001
Normal
N/A
CPT0063640001
Normal
N/A
CPT0009000003
Tumor
N/A
CPT0010170001
Normal
N/A
CPT0079270003
Tumor
N/A
CPT0069190001
Normal
N/A
CPT0001270001
Normal
N/A
CPT0015810003
Tumor
N/A
CPT0025110003
Tumor
N/A
CPT0024680001
Normal
N/A
CPT0012090003
Normal
N/A
CPT0009020003
Normal
N/A
CPT0077310003
Tumor
N/A
CPT0077490003
Tumor
N/A
CPT0014160003
Tumor
N/A
CPT0078530001
Normal
N/A
CPT0020020001
Normal
N/A
CPT0066520001
Normal
N/A
CPT0014370004
Tumor
N/A
CPT0001500009
Tumor
N/A
CPT0081600003
Tumor
N/A
CPT0001190001
Normal
N/A
CPT0088630003
Tumor
N/A
CPT0069000003
Tumor
N/A
CPT0088710001
Normal
N/A
CPT0092160003
Tumor
N/A
CPT0006630003
Tumor
N/A
CPT0001260009
Tumor
N/A
CPT0065750003
Tumor
N/A
CPT0065930003
Tumor
N/A
CPT0012770003
Normal
N/A
CPT0012180003
Tumor
N/A
CPT0017410003
Tumor
N/A
CPT0023350003
Tumor
N/A
CPT0075570001
Normal
N/A
CPT0014130001
Normal
N/A
CPT0078510003
Tumor
N/A
CPT0066470004
Tumor
N/A
CPT0065450001
Normal
N/A
CPT0079000001
Normal
N/A
CPT0092800003
Normal
N/A
CPT0006900003
Tumor
N/A
CPT0015910003
Tumor
N/A
CPT0020130001
Normal
N/A
CPT0089480003
Normal
N/A
CPT0007470001
Normal
N/A
CPT0064400001
Normal
N/A
CPT0088920001
Normal
N/A
CPT0092730003
Tumor
N/A
CPT0077110003
Tumor
N/A
CPT0086030003
Tumor
N/A
CPT0025290003
Tumor
N/A
CPT0012550003
Tumor
N/A
CPT0018250001
Normal
N/A
CPT0017450001
Normal
N/A
CPT0077320001
Normal
N/A
CPT0077500001
Normal
N/A
CPT0092310003
Normal
N/A
CPT0079480003
Tumor
N/A
CPT0006530001
Normal
N/A
CPT0065430003
Tumor
N/A
CPT0019160001
Normal
N/A
CPT0081620001
Normal
N/A
CPT0063320003
Tumor
N/A
CPT0078670001
Normal
N/A
CPT0089460004
Tumor
N/A
CPT0007320003
Tumor
N/A
CPT0088690003
Tumor
N/A
CPT0010160003
Tumor
N/A
CPT0014450004
Tumor
N/A
CPT0025920001
Normal
N/A
CPT0076350001
Normal
N/A
CPT0015730003
Tumor
N/A
CPT0025350003
Tumor
N/A
CPT0012370003
Tumor
N/A
CPT0012280003
Tumor
N/A
CPT0009080003
Normal
N/A
CPT0079410003
Tumor
N/A
CPT0075560003
Tumor
N/A
CPT0001230001
Normal
N/A
CPT0079510001
Normal
N/A
CPT0066430001
Normal
N/A
CPT0001540009
Tumor
N/A
CPT0078990003
Tumor
N/A
CPT0065810003
Tumor
N/A
CPT0010120001
Normal
N/A
CPT0086870003
Tumor
N/A
CPT0075170001
Normal
N/A
CPT0000640003
Tumor
N/A
CPT0065870003
Tumor
N/A
CPT0088780001
Normal
N/A
CPT0086970003
Normal
N/A
CPT0079300001
Normal
N/A
CPT0092740003
Normal
N/A
CPT0085670003
Tumor
N/A
CPT0081880003
Tumor
N/A
CPT0013790003
Normal
N/A
CPT0012290003
Normal
N/A
CPT0087050003
Normal
N/A
CPT0009060003
Tumor
N/A
CPT0023690003
Tumor
N/A
CPT0001220008
Tumor
N/A
CPT0088480003
Tumor
N/A
CPT0026420001
Normal
N/A
CPT0079430001
Normal
N/A
CPT0000890001
Normal
N/A
CPT0086370003
Normal
N/A
CPT0025580004
Tumor
N/A
CPT0081990003
Tumor
N/A
CPT0025060001
Normal
N/A
CPT0075130003
Tumor
N/A
CPT0000660001
Normal
N/A
CPT0086820003
Tumor
N/A
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RENAL CANCER - Protein expressioni
A mouse-over function shows sample information and annotation data. Click on an image to view it in a full screen mode. Samples can be filtered based on level of antibody staining by selecting one or several of the following categories: high, medium, low and not detected. The assay and annotation is described here.
Note that samples used for immunohistochemistry by the Human Protein Atlas do not correspond to samples in the TCGA dataset.
Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
The Human Protein Atlas project is funded
